RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 MAPK8IP3Q9UPT6 1336 aa9.56□□□□□ -0.88
HDAC9-218ENST00000456174 TRIM44Q96DX7 344 aaPredicted RBP9.56□□□□□ -0.88
HDAC9-218ENST00000456174 LRRC7Q96NW7 1537 aa9.55□□□□□ -0.88
HDAC9-218ENST00000456174 FCHSD2O94868 740 aa9.55□□□□□ -0.88
HDAC9-218ENST00000456174 ZFP91Q96JP5 570 aaPredicted RBP9.55□□□□□ -0.88
HDAC9-218ENST00000456174 CCDC94Q9BW85 323 aaPredicted RBP9.55□□□□□ -0.88
HDAC9-218ENST00000456174 FAM13BQ9NYF5 915 aa9.55□□□□□ -0.88
HDAC9-218ENST00000456174 DYNC1I1O14576 645 aa9.55□□□□□ -0.88
HDAC9-218ENST00000456174 WDR63Q8IWG1 891 aa9.55□□□□□ -0.88
HDAC9-218ENST00000456174 USP31Q70CQ4 1352 aa9.54□□□□□ -0.88
HDAC9-218ENST00000456174 IL13P35225 146 aa9.54□□□□□ -0.88
HDAC9-218ENST00000456174 BECN1Q14457 450 aa9.54□□□□□ -0.88
HDAC9-218ENST00000456174 ANP32BQ92688 251 aaKnown RBP9.54□□□□□ -0.88
HDAC9-218ENST00000456174 PRDM10Q9NQV6 1147 aa9.54□□□□□ -0.88
HDAC9-218ENST00000456174 PHF8Q9UPP1 1060 aa9.54□□□□□ -0.88
HDAC9-218ENST00000456174 PEAK1Q9H792 1746 aa9.54□□□□□ -0.88
HDAC9-218ENST00000456174 MARF1Q9Y4F3 1742 aaKnown RBP9.54□□□□□ -0.88
HDAC9-218ENST00000456174 TMPOP42166 694 aaKnown RBP9.54□□□□□ -0.88
HDAC9-218ENST00000456174 PROSER2Q86WR7 435 aaPredicted RBP9.54□□□□□ -0.88
HDAC9-218ENST00000456174 PLIN1O60240 522 aa9.53□□□□□ -0.88
HDAC9-218ENST00000456174 MCM4P33991 863 aa9.53□□□□□ -0.88
HDAC9-218ENST00000456174 ZSCAN30Q86W11 494 aa9.53□□□□□ -0.88
HDAC9-218ENST00000456174 USP54Q70EL1 1684 aa9.53□□□□□ -0.88
HDAC9-218ENST00000456174 SOX12O15370 315 aa9.53□□□□□ -0.88
HDAC9-218ENST00000456174 HMOX1P09601 288 aa9.53□□□□□ -0.88
HDAC9-218ENST00000456174 PRKAR2BP31323 418 aa9.53□□□□□ -0.88
HDAC9-218ENST00000456174 USP19O94966 1318 aa9.52□□□□□ -0.88
HDAC9-218ENST00000456174 STRCP1A6NGW2 1772 aa9.52□□□□□ -0.88
HDAC9-218ENST00000456174 ESCO1Q5FWF5 840 aa9.52□□□□□ -0.89
HDAC9-218ENST00000456174 CENPQQ7L2Z9 268 aaPredicted RBP9.52□□□□□ -0.89
HDAC9-218ENST00000456174 HSPA2P54652 639 aa9.51□□□□□ -0.89
HDAC9-218ENST00000456174 NLRP6P59044 892 aa9.51□□□□□ -0.89
HDAC9-218ENST00000456174 PPP1R9BQ96SB3 815 aa9.51□□□□□ -0.89
HDAC9-218ENST00000456174 TRIM35Q9UPQ4 493 aa9.51□□□□□ -0.89
HDAC9-218ENST00000456174 DLG5Q8TDM6 1919 aa9.51□□□□□ -0.89
HDAC9-218ENST00000456174 KDM4FA0A1W2PPD8 638 aa9.51□□□□□ -0.89
HDAC9-218ENST00000456174 SKAP1Q86WV1 359 aa9.51□□□□□ -0.89
HDAC9-218ENST00000456174 ABTB2Q8N961 1025 aa9.51□□□□□ -0.89
HDAC9-218ENST00000456174 EIF4A2Q14240 407 aaKnown RBP9.5□□□□□ -0.89
HDAC9-218ENST00000456174 NUTM2GQ5VZR2 741 aa9.5□□□□□ -0.89
HDAC9-218ENST00000456174 MAP3K19Q56UN5 1328 aa9.5□□□□□ -0.89
HDAC9-218ENST00000456174 UQCRHLA0A096LP55 91 aa9.5□□□□□ -0.89
HDAC9-218ENST00000456174 TRAK2O60296 914 aa9.5□□□□□ -0.89
HDAC9-218ENST00000456174 UQCRHP07919 91 aa9.5□□□□□ -0.89
HDAC9-218ENST00000456174 CCDC173Q0VFZ6 552 aa9.5□□□□□ -0.89
HDAC9-218ENST00000456174 HSP90AB2PQ58FF8 381 aa9.5□□□□□ -0.89
HDAC9-218ENST00000456174 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.5□□□□□ -0.89
HDAC9-218ENST00000456174 PHACTR3Q96KR7 559 aa9.5□□□□□ -0.89
HDAC9-218ENST00000456174 RGPD1P0DJD0 1748 aa9.5□□□□□ -0.89
HDAC9-218ENST00000456174 PSME1Q06323 249 aa9.49□□□□□ -0.89
HDAC9-218ENST00000456174 SLC20A2Q08357 652 aa9.49□□□□□ -0.89
HDAC9-218ENST00000456174 C19orf44Q9H6X5 657 aa9.49□□□□□ -0.89
HDAC9-218ENST00000456174 SBNO1A3KN83 1393 aa9.49□□□□□ -0.89
HDAC9-218ENST00000456174 FLT4P35916 1363 aa9.49□□□□□ -0.89
HDAC9-218ENST00000456174 VGLL3A8MV65 326 aa9.49□□□□□ -0.89
HDAC9-218ENST00000456174 BCAR3O75815 825 aa9.49□□□□□ -0.89
HDAC9-218ENST00000456174 NFE2L2Q16236 605 aa9.49□□□□□ -0.89
HDAC9-218ENST00000456174 PLCD3Q8N3E9 789 aa9.49□□□□□ -0.89
HDAC9-218ENST00000456174 SECISBP2LQ93073 1101 aaKnown RBP9.49□□□□□ -0.89
HDAC9-218ENST00000456174 ORAI2Q96SN7 254 aa9.49□□□□□ -0.89
HDAC9-218ENST00000456174 LTN1O94822 1766 aa9.49□□□□□ -0.89
HDAC9-218ENST00000456174 STRCQ7RTU9 1775 aa9.49□□□□□ -0.89
HDAC9-218ENST00000456174 IL16Q14005 1332 aa9.48□□□□□ -0.89
HDAC9-218ENST00000456174 ZNF500O60304 480 aaPredicted RBP9.48□□□□□ -0.89
HDAC9-218ENST00000456174 AMPHP49418 695 aa9.48□□□□□ -0.89
HDAC9-218ENST00000456174 HS1BP3Q53T59 392 aa9.48□□□□□ -0.89
HDAC9-218ENST00000456174 C20orf194Q5TEA3 1177 aa9.48□□□□□ -0.89
HDAC9-218ENST00000456174 LMTK3Q96Q04 1460 aa9.48□□□□□ -0.89
HDAC9-218ENST00000456174 KIF1AQ12756 1690 aa9.48□□□□□ -0.89
HDAC9-218ENST00000456174 CRBNQ96SW2 442 aa9.48□□□□□ -0.89
HDAC9-218ENST00000456174 R3HCC1Q9Y3T6 440 aaKnown RBP9.48□□□□□ -0.89
HDAC9-218ENST00000456174 TMEM94Q12767 1356 aa9.47□□□□□ -0.89
HDAC9-218ENST00000456174 SULT6B1Q6IMI4 303 aa9.47□□□□□ -0.89
HDAC9-218ENST00000456174 AEBP1Q8IUX7 1158 aa9.47□□□□□ -0.89
HDAC9-218ENST00000456174 GZF1Q9H116 711 aaPredicted RBP9.47□□□□□ -0.89
HDAC9-218ENST00000456174 SLKQ9H2G2 1235 aaPredicted RBP9.47□□□□□ -0.89
HDAC9-218ENST00000456174 FOXO3O43524 673 aa9.47□□□□□ -0.89
HDAC9-218ENST00000456174 RGS22Q8NE09 1264 aa9.47□□□□□ -0.89
HDAC9-218ENST00000456174 TSR2Q969E8 191 aaKnown RBP9.47□□□□□ -0.89
HDAC9-218ENST00000456174 KIF24Q5T7B8 1368 aa9.46□□□□□ -0.89
HDAC9-218ENST00000456174 C1orf167Q5SNV9 1468 aa9.46□□□□□ -0.89
HDAC9-218ENST00000456174 TRPM3Q9HCF6 1732 aaPredicted RBP9.46□□□□□ -0.89
HDAC9-218ENST00000456174 NCOA3Q9Y6Q9 1424 aa9.46□□□□□ -0.9
HDAC9-218ENST00000456174 ATF3P18847 181 aa9.46□□□□□ -0.9
HDAC9-218ENST00000456174 RARSP54136 660 aaKnown RBP9.46□□□□□ -0.9
HDAC9-218ENST00000456174 CHMP4AQ9BY43 222 aa9.46□□□□□ -0.9
HDAC9-218ENST00000456174 XIRP1Q702N8 1843 aaKnown RBP9.46□□□□□ -0.9
HDAC9-218ENST00000456174 DDX11L8A8MPP1 907 aa9.45□□□□□ -0.9
HDAC9-218ENST00000456174 MSNP26038 577 aaKnown RBP9.45□□□□□ -0.9
HDAC9-218ENST00000456174 XPCQ01831 940 aaPredicted RBP9.45□□□□□ -0.9
HDAC9-218ENST00000456174 EXOSC9Q06265 439 aaKnown RBP9.45□□□□□ -0.9
HDAC9-218ENST00000456174 ARHGEF10O15013 1369 aa9.45□□□□□ -0.9
HDAC9-218ENST00000456174 DCCP43146 1447 aa9.45□□□□□ -0.9
HDAC9-218ENST00000456174 NFAT5O94916 1531 aa9.44□□□□□ -0.9
HDAC9-218ENST00000456174 CT47B1P0C2W7 299 aaPredicted RBP9.44□□□□□ -0.9
HDAC9-218ENST00000456174 HOXC9P31274 260 aa9.44□□□□□ -0.9
HDAC9-218ENST00000456174 IRX3P78415 501 aaPredicted RBP9.44□□□□□ -0.9
HDAC9-218ENST00000456174 LMOD3Q0VAK6 560 aa9.44□□□□□ -0.9
HDAC9-218ENST00000456174 CSPP1Q1MSJ5 1256 aa9.44□□□□□ -0.9
HDAC9-218ENST00000456174 SASS6Q6UVJ0 657 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms