RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 SPG7Q9UQ90 795 aa19.06■□□□□ 0.64
HMGXB4-204ENST00000455359 RGS12O14924 1447 aa19.06■□□□□ 0.64
HMGXB4-204ENST00000455359 PLEKHO1Q53GL0 409 aaPredicted RBP19.05■□□□□ 0.64
HMGXB4-204ENST00000455359 KRT27Q7Z3Y8 459 aa19.05■□□□□ 0.64
HMGXB4-204ENST00000455359 MEGF6O75095 1541 aa19.05■□□□□ 0.64
HMGXB4-204ENST00000455359 RGPD1P0DJD0 1748 aa19.05■□□□□ 0.64
HMGXB4-204ENST00000455359 THSD7AQ9UPZ6 1657 aa19.04■□□□□ 0.64
HMGXB4-204ENST00000455359 HMOX1P09601 288 aa19.04■□□□□ 0.64
HMGXB4-204ENST00000455359 TNS2Q63HR2 1409 aa19.04■□□□□ 0.64
HMGXB4-204ENST00000455359 RSPH6AQ9H0K4 717 aa19.03■□□□□ 0.64
HMGXB4-204ENST00000455359 PNISRQ8TF01 805 aaKnown RBP19.02■□□□□ 0.64
HMGXB4-204ENST00000455359 PCDH11XQ9BZA7 1347 aa19.02■□□□□ 0.64
HMGXB4-204ENST00000455359 PCDH11YQ9BZA8 1340 aa19.02■□□□□ 0.64
HMGXB4-204ENST00000455359 NEFMP07197 916 aa19.01■□□□□ 0.63
HMGXB4-204ENST00000455359 PRKAR2BP31323 418 aa19■□□□□ 0.63
HMGXB4-204ENST00000455359 CCDC184Q52MB2 194 aa19■□□□□ 0.63
HMGXB4-204ENST00000455359 BCL9O00512 1426 aa19■□□□□ 0.63
HMGXB4-204ENST00000455359 GAS2L2Q8NHY3 880 aa19■□□□□ 0.63
HMGXB4-204ENST00000455359 PARP4Q9UKK3 1724 aaKnown RBP18.99■□□□□ 0.63
HMGXB4-204ENST00000455359 FAM196AQ6ZSG2 479 aa18.99■□□□□ 0.63
HMGXB4-204ENST00000455359 IFNL2Q8IZJ0 200 aa18.99■□□□□ 0.63
HMGXB4-204ENST00000455359 MIER1Q8N108 512 aa18.99■□□□□ 0.63
HMGXB4-204ENST00000455359 MARCH10Q8NA82 808 aaPredicted RBP18.99■□□□□ 0.63
HMGXB4-204ENST00000455359 ADAMTS8Q9UP79 889 aa18.99■□□□□ 0.63
HMGXB4-204ENST00000455359 HSP90AB1P08238 724 aaKnown RBP18.98■□□□□ 0.63
HMGXB4-204ENST00000455359 NKX1-1Q15270 411 aaPredicted RBP18.98■□□□□ 0.63
HMGXB4-204ENST00000455359 PLEKHF1Q96S99 279 aa18.98■□□□□ 0.63
HMGXB4-204ENST00000455359 CYP27B1O15528 508 aa18.97■□□□□ 0.63
HMGXB4-204ENST00000455359 DDX54Q8TDD1 881 aaKnown RBP18.97■□□□□ 0.63
HMGXB4-204ENST00000455359 C1orf141Q5JVX7 400 aa18.96■□□□□ 0.63
HMGXB4-204ENST00000455359 ZNF530Q6P9A1 599 aaPredicted RBP18.96■□□□□ 0.63
HMGXB4-204ENST00000455359 MAPK8IP3Q9UPT6 1336 aa18.95■□□□□ 0.62
HMGXB4-204ENST00000455359 RGPD2P0DJD1 1756 aa18.95■□□□□ 0.62
HMGXB4-204ENST00000455359 LRRC37A3O60309 1634 aa18.95■□□□□ 0.62
HMGXB4-204ENST00000455359 PHKG2P15735 406 aa18.95■□□□□ 0.62
HMGXB4-204ENST00000455359 MTHFSDQ2M296 383 aaKnown RBP18.95■□□□□ 0.62
HMGXB4-204ENST00000455359 AKAP4Q5JQC9 854 aa18.95■□□□□ 0.62
HMGXB4-204ENST00000455359 RUNDC1Q96C34 613 aa18.95■□□□□ 0.62
HMGXB4-204ENST00000455359 PHACTR3Q96KR7 559 aa18.95■□□□□ 0.62
HMGXB4-204ENST00000455359 WNK3Q9BYP7 1800 aa18.94■□□□□ 0.62
HMGXB4-204ENST00000455359 DCAF5Q96JK2 942 aa18.93■□□□□ 0.62
HMGXB4-204ENST00000455359 ILDR2Q71H61 639 aa18.92■□□□□ 0.62
HMGXB4-204ENST00000455359 HTATSF1O43719 755 aaKnown RBP18.91■□□□□ 0.62
HMGXB4-204ENST00000455359 NFE2L2Q16236 605 aa18.91■□□□□ 0.62
HMGXB4-204ENST00000455359 PKD1L3Q7Z443 1732 aa18.9■□□□□ 0.62
HMGXB4-204ENST00000455359 GNAT3A8MTJ3 354 aa18.9■□□□□ 0.62
HMGXB4-204ENST00000455359 CCDC125Q86Z20 511 aa18.9■□□□□ 0.62
HMGXB4-204ENST00000455359 NCBP3Q53F19 620 aaKnown RBP18.89■□□□□ 0.61
HMGXB4-204ENST00000455359 MAP3K5Q99683 1374 aa18.88■□□□□ 0.61
HMGXB4-204ENST00000455359 ERVV-2B6SEH9 535 aa18.88■□□□□ 0.61
HMGXB4-204ENST00000455359 LMOD3Q0VAK6 560 aa18.87■□□□□ 0.61
HMGXB4-204ENST00000455359 FAM182BQ5T319 152 aa18.87■□□□□ 0.61
HMGXB4-204ENST00000455359 CCDC146Q8IYE0 955 aa18.87■□□□□ 0.61
HMGXB4-204ENST00000455359 FAM9BQ8IZU0 186 aa18.87■□□□□ 0.61
HMGXB4-204ENST00000455359 NGEFQ8N5V2 710 aa18.87■□□□□ 0.61
HMGXB4-204ENST00000455359 RTF1Q92541 710 aaKnown RBP18.87■□□□□ 0.61
HMGXB4-204ENST00000455359 BCL11BQ9C0K0 894 aaPredicted RBP18.87■□□□□ 0.61
HMGXB4-204ENST00000455359 TMPOP42166 694 aaKnown RBP18.86■□□□□ 0.61
HMGXB4-204ENST00000455359 RIPK4P57078 832 aa18.84■□□□□ 0.61
HMGXB4-204ENST00000455359 MPRIPQ6WCQ1 1025 aa18.84■□□□□ 0.61
HMGXB4-204ENST00000455359 APAF1O14727 1248 aa18.83■□□□□ 0.61
HMGXB4-204ENST00000455359 RNMTO43148 476 aaKnown RBP18.83■□□□□ 0.61
HMGXB4-204ENST00000455359 PRIM1P49642 420 aaKnown RBP18.83■□□□□ 0.61
HMGXB4-204ENST00000455359 BRWD3Q6RI45 1802 aa18.83■□□□□ 0.6
HMGXB4-204ENST00000455359 IL17REQ8NFR9 667 aa18.82■□□□□ 0.6
HMGXB4-204ENST00000455359 KDM6AO15550 1401 aaPredicted RBP18.82■□□□□ 0.6
HMGXB4-204ENST00000455359 CEMIPQ8WUJ3 1361 aa18.82■□□□□ 0.6
HMGXB4-204ENST00000455359 TRIM37O94972 964 aa18.81■□□□□ 0.6
HMGXB4-204ENST00000455359 CABP4P57796 275 aa18.81■□□□□ 0.6
HMGXB4-204ENST00000455359 SF3B2Q13435 895 aaKnown RBP18.81■□□□□ 0.6
HMGXB4-204ENST00000455359 ACSBG1Q96GR2 724 aa18.81■□□□□ 0.6
HMGXB4-204ENST00000455359 SHANK3Q9BYB0 1731 aa18.81■□□□□ 0.6
HMGXB4-204ENST00000455359 TMOD3Q9NYL9 352 aa18.81■□□□□ 0.6
HMGXB4-204ENST00000455359 CCDC27Q2M243 656 aa18.8■□□□□ 0.6
HMGXB4-204ENST00000455359 SLC52A2Q9HAB3 445 aa18.8■□□□□ 0.6
HMGXB4-204ENST00000455359 LGR6Q9HBX8 967 aa18.8■□□□□ 0.6
HMGXB4-204ENST00000455359 KCNQ2O43526 872 aa18.79■□□□□ 0.6
HMGXB4-204ENST00000455359 TEFQ10587 303 aa18.79■□□□□ 0.6
HMGXB4-204ENST00000455359 UPF1Q92900 1129 aaKnown RBP eCLIP18.79■□□□□ 0.6
HMGXB4-204ENST00000455359 SYTL4Q96C24 671 aaPredicted RBP18.79■□□□□ 0.6
HMGXB4-204ENST00000455359 PIGBQ92521 554 aa18.78■□□□□ 0.6
HMGXB4-204ENST00000455359 SMARCC1Q92922 1105 aaPredicted RBP18.78■□□□□ 0.6
HMGXB4-204ENST00000455359 PLSCR1O15162 318 aa18.77■□□□□ 0.6
HMGXB4-204ENST00000455359 CALD1Q05682 793 aaKnown RBP18.77■□□□□ 0.6
HMGXB4-204ENST00000455359 MCM10Q7L590 875 aa18.77■□□□□ 0.6
HMGXB4-204ENST00000455359 NFATC2IPQ8NCF5 419 aa18.77■□□□□ 0.6
HMGXB4-204ENST00000455359 RRP7AQ9Y3A4 280 aaKnown RBP18.77■□□□□ 0.6
HMGXB4-204ENST00000455359 MRC1P22897 1456 aa18.77■□□□□ 0.59
HMGXB4-204ENST00000455359 HMGB2P26583 209 aaKnown RBP18.76■□□□□ 0.59
HMGXB4-204ENST00000455359 NEUROD2Q15784 382 aa18.76■□□□□ 0.59
HMGXB4-204ENST00000455359 BABAM1Q9NWV8 329 aa18.76■□□□□ 0.59
HMGXB4-204ENST00000455359 TRIM35Q9UPQ4 493 aa18.76■□□□□ 0.59
HMGXB4-204ENST00000455359 EP400Q96L91 3159 aa18.76■□□□□ 0.59
HMGXB4-204ENST00000455359 APBA3O96018 575 aa18.75■□□□□ 0.59
HMGXB4-204ENST00000455359 BAG6P46379 1132 aa18.75■□□□□ 0.59
HMGXB4-204ENST00000455359 ADAMTS7Q9UKP4 1686 aa18.75■□□□□ 0.59
HMGXB4-204ENST00000455359 TAF7Q15545 349 aaPredicted RBP18.74■□□□□ 0.59
HMGXB4-204ENST00000455359 PTF1AQ7RTS3 328 aa18.74■□□□□ 0.59
HMGXB4-204ENST00000455359 SOCS7O14512 581 aa18.74■□□□□ 0.59
HMGXB4-204ENST00000455359 DCTN1Q14203 1278 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms