RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 RTL1A6NKG5 1358 aa15.68■□□□□ 0.1
ECHDC1-209ENST00000454591 RGPD8O14715 1765 aaPredicted RBP15.67■□□□□ 0.1
ECHDC1-209ENST00000454591 FAM83GA6ND36 823 aa15.67■□□□□ 0.1
ECHDC1-209ENST00000454591 HTATSF1O43719 755 aaKnown RBP15.67■□□□□ 0.1
ECHDC1-209ENST00000454591 DDIT3P35638 169 aa15.67■□□□□ 0.1
ECHDC1-209ENST00000454591 MFAP1P55081 439 aaKnown RBP15.67■□□□□ 0.1
ECHDC1-209ENST00000454591 DCTPP1Q9H773 170 aa15.67■□□□□ 0.1
ECHDC1-209ENST00000454591 CHMP5Q9NZZ3 219 aa15.67■□□□□ 0.1
ECHDC1-209ENST00000454591 SOS1Q07889 1333 aaPredicted RBP15.66■□□□□ 0.1
ECHDC1-209ENST00000454591 IGSF1Q8N6C5 1336 aa15.66■□□□□ 0.1
ECHDC1-209ENST00000454591 AEBP1Q8IUX7 1158 aa15.66■□□□□ 0.1
ECHDC1-209ENST00000454591 RPAP2Q8IXW5 612 aaPredicted RBP15.66■□□□□ 0.1
ECHDC1-209ENST00000454591 ANKRD44Q8N8A2 993 aa15.66■□□□□ 0.1
ECHDC1-209ENST00000454591 ANKRD45Q5TZF3 282 aa15.64■□□□□ 0.09
ECHDC1-209ENST00000454591 CIZ1Q9ULV3 898 aaPredicted RBP15.64■□□□□ 0.09
ECHDC1-209ENST00000454591 AMOTL2Q9Y2J4 779 aa15.64■□□□□ 0.09
ECHDC1-209ENST00000454591 NWD1Q149M9 1564 aa15.64■□□□□ 0.09
ECHDC1-209ENST00000454591 FAM208AQ9UK61 1670 aaKnown RBP15.64■□□□□ 0.09
ECHDC1-209ENST00000454591 SLKQ9H2G2 1235 aaPredicted RBP15.63■□□□□ 0.09
ECHDC1-209ENST00000454591 MAP3K19Q56UN5 1328 aa15.63■□□□□ 0.09
ECHDC1-209ENST00000454591 CACNB1Q02641 598 aaPredicted RBP15.63■□□□□ 0.09
ECHDC1-209ENST00000454591 DCTN1Q14203 1278 aa15.63■□□□□ 0.09
ECHDC1-209ENST00000454591 HSP90AB2PQ58FF8 381 aa15.63■□□□□ 0.09
ECHDC1-209ENST00000454591 HSCBQ8IWL3 235 aa15.63■□□□□ 0.09
ECHDC1-209ENST00000454591 BABAM1Q9NWV8 329 aa15.63■□□□□ 0.09
ECHDC1-209ENST00000454591 ELL2O00472 640 aaPredicted RBP15.62■□□□□ 0.09
ECHDC1-209ENST00000454591 THEMISQ8N1K5 641 aaPredicted RBP15.62■□□□□ 0.09
ECHDC1-209ENST00000454591 PHRF1Q9P1Y6 1649 aaKnown RBP15.61■□□□□ 0.09
ECHDC1-209ENST00000454591 CDC45O75419 566 aa15.61■□□□□ 0.09
ECHDC1-209ENST00000454591 GAS2L2Q8NHY3 880 aa15.61■□□□□ 0.09
ECHDC1-209ENST00000454591 KIF2CQ99661 725 aa15.61■□□□□ 0.09
ECHDC1-209ENST00000454591 CEP170BQ9Y4F5 1589 aaPredicted RBP15.61■□□□□ 0.09
ECHDC1-209ENST00000454591 MCM4P33991 863 aa15.6■□□□□ 0.09
ECHDC1-209ENST00000454591 TBC1D9Q6ZT07 1266 aa15.6■□□□□ 0.09
ECHDC1-209ENST00000454591 PLEKHM2Q8IWE5 1019 aa15.6■□□□□ 0.09
ECHDC1-209ENST00000454591 CEP85Q6P2H3 762 aa15.59■□□□□ 0.09
ECHDC1-209ENST00000454591 C1orf115Q9H7X2 142 aa15.59■□□□□ 0.09
ECHDC1-209ENST00000454591 CHD2O14647 1828 aaKnown RBP15.59■□□□□ 0.09
ECHDC1-209ENST00000454591 PXDNLA1KZ92 1463 aa15.59■□□□□ 0.09
ECHDC1-209ENST00000454591 ZNF142P52746 1687 aaPredicted RBP15.59■□□□□ 0.09
ECHDC1-209ENST00000454591 SLC26A8Q96RN1 970 aa15.58■□□□□ 0.09
ECHDC1-209ENST00000454591 TUBGCP6Q96RT7 1819 aa15.58■□□□□ 0.09
ECHDC1-209ENST00000454591 MSH6P52701 1360 aa15.58■□□□□ 0.09
ECHDC1-209ENST00000454591 MTHFSDQ2M296 383 aaKnown RBP15.58■□□□□ 0.08
ECHDC1-209ENST00000454591 TTC22Q5TAA0 569 aa15.58■□□□□ 0.08
ECHDC1-209ENST00000454591 MCM10Q7L590 875 aa15.58■□□□□ 0.08
ECHDC1-209ENST00000454591 CCT4P50991 539 aaKnown RBP15.57■□□□□ 0.08
ECHDC1-209ENST00000454591 MED1Q15648 1581 aaPredicted RBP15.57■□□□□ 0.08
ECHDC1-209ENST00000454591 GSPT1P15170 499 aaKnown RBP15.56■□□□□ 0.08
ECHDC1-209ENST00000454591 L1TD1Q5T7N2 865 aaKnown RBP15.56■□□□□ 0.08
ECHDC1-209ENST00000454591 EYA1Q99502 592 aa15.56■□□□□ 0.08
ECHDC1-209ENST00000454591 OSBPL3Q9H4L5 887 aa15.56■□□□□ 0.08
ECHDC1-209ENST00000454591 DDX11L8A8MPP1 907 aa15.55■□□□□ 0.08
ECHDC1-209ENST00000454591 RTF1Q92541 710 aaKnown RBP15.55■□□□□ 0.08
ECHDC1-209ENST00000454591 PTMSP20962 102 aa15.54■□□□□ 0.08
ECHDC1-209ENST00000454591 KRT24Q2M2I5 525 aa15.54■□□□□ 0.08
ECHDC1-209ENST00000454591 NGDNQ8NEJ9 315 aaKnown RBP15.54■□□□□ 0.08
ECHDC1-209ENST00000454591 HMMRO75330 724 aa15.53■□□□□ 0.08
ECHDC1-209ENST00000454591 CEBPAP49715 358 aaPredicted RBP15.53■□□□□ 0.08
ECHDC1-209ENST00000454591 CLEC17AQ6ZS10 378 aa15.53■□□□□ 0.08
ECHDC1-209ENST00000454591 TSPYL4Q9UJ04 414 aa15.53■□□□□ 0.08
ECHDC1-209ENST00000454591 LTN1O94822 1766 aa15.53■□□□□ 0.08
ECHDC1-209ENST00000454591 FSD2A1L4K1 749 aa15.53■□□□□ 0.08
ECHDC1-209ENST00000454591 K7ELQ4 463 aaPredicted RBP15.53■□□□□ 0.08
ECHDC1-209ENST00000454591 SLC4A2P04920 1241 aa15.53■□□□□ 0.08
ECHDC1-209ENST00000454591 HOXC9P31274 260 aa15.53■□□□□ 0.08
ECHDC1-209ENST00000454591 IL27Q8NEV9 243 aa15.53■□□□□ 0.08
ECHDC1-209ENST00000454591 ISY1Q9ULR0 285 aaKnown RBP15.53■□□□□ 0.08
ECHDC1-209ENST00000454591 NFAT5O94916 1531 aa15.52■□□□□ 0.08
ECHDC1-209ENST00000454591 MAP3K5Q99683 1374 aa15.52■□□□□ 0.08
ECHDC1-209ENST00000454591 AMPHP49418 695 aa15.52■□□□□ 0.07
ECHDC1-209ENST00000454591 RAB3GAP1Q15042 981 aa15.52■□□□□ 0.07
ECHDC1-209ENST00000454591 MEIS3Q99687 375 aa15.52■□□□□ 0.07
ECHDC1-209ENST00000454591 KDM3BQ7LBC6 1761 aa15.51■□□□□ 0.07
ECHDC1-209ENST00000454591 LMTK3Q96Q04 1460 aa15.51■□□□□ 0.07
ECHDC1-209ENST00000454591 RABEP1Q15276 862 aa15.51■□□□□ 0.07
ECHDC1-209ENST00000454591 LMO7Q8WWI1 1683 aa15.5■□□□□ 0.07
ECHDC1-209ENST00000454591 GNAT3A8MTJ3 354 aa15.5■□□□□ 0.07
ECHDC1-209ENST00000454591 USP26Q9BXU7 913 aa15.5■□□□□ 0.07
ECHDC1-209ENST00000454591 NCAPD2Q15021 1401 aa15.5■□□□□ 0.07
ECHDC1-209ENST00000454591 ADGRL3Q9HAR2 1447 aa15.5■□□□□ 0.07
ECHDC1-209ENST00000454591 CEMIPQ8WUJ3 1361 aa15.5■□□□□ 0.07
ECHDC1-209ENST00000454591 SALL3Q9BXA9 1300 aa15.5■□□□□ 0.07
ECHDC1-209ENST00000454591 NUTM2FA1L443 756 aa15.49■□□□□ 0.07
ECHDC1-209ENST00000454591 FOXO3O43524 673 aa15.49■□□□□ 0.07
ECHDC1-209ENST00000454591 CCDC30Q5VVM6 783 aa15.49■□□□□ 0.07
ECHDC1-209ENST00000454591 BRPF3Q9ULD4 1205 aa15.49■□□□□ 0.07
ECHDC1-209ENST00000454591 HSP90AB1P08238 724 aaKnown RBP15.48■□□□□ 0.07
ECHDC1-209ENST00000454591 GNAI3P08754 354 aa15.48■□□□□ 0.07
ECHDC1-209ENST00000454591 NLRP6P59044 892 aa15.48■□□□□ 0.07
ECHDC1-209ENST00000454591 STK31Q9BXU1 1019 aa15.48■□□□□ 0.07
ECHDC1-209ENST00000454591 CAMTA1Q9Y6Y1 1673 aa15.48■□□□□ 0.07
ECHDC1-209ENST00000454591 HOXB7P09629 217 aa15.48■□□□□ 0.07
ECHDC1-209ENST00000454591 KCNA6P17658 529 aa15.48■□□□□ 0.07
ECHDC1-209ENST00000454591 G2E3Q7L622 706 aa15.48■□□□□ 0.07
ECHDC1-209ENST00000454591 OVOS2A0A0G2JMS6 1433 aa15.47■□□□□ 0.07
ECHDC1-209ENST00000454591 TRAK2O60296 914 aa15.47■□□□□ 0.07
ECHDC1-209ENST00000454591 GNAI2P04899 355 aa15.47■□□□□ 0.07
ECHDC1-209ENST00000454591 SDSP20132 328 aa15.47■□□□□ 0.07
ECHDC1-209ENST00000454591 SKOR2Q2VWA4 1001 aaPredicted RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms