RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 PARD3Q8TEW0 1356 aa22.03■■□□□ 1.12
SCAMP4-205ENST00000452128 PROM2Q8N271 834 aa22.02■■□□□ 1.12
SCAMP4-205ENST00000452128 DDX54Q8TDD1 881 aaKnown RBP22■■□□□ 1.11
SCAMP4-205ENST00000452128 RAPGEF4Q8WZA2 1011 aa21.99■■□□□ 1.11
SCAMP4-205ENST00000452128 IGSF1Q8N6C5 1336 aa21.99■■□□□ 1.11
SCAMP4-205ENST00000452128 TATP17735 454 aaPredicted RBP21.98■■□□□ 1.11
SCAMP4-205ENST00000452128 CC2D1BQ5T0F9 858 aaKnown RBP21.98■■□□□ 1.11
SCAMP4-205ENST00000452128 CYP27B1O15528 508 aa21.97■■□□□ 1.11
SCAMP4-205ENST00000452128 IL13P35225 146 aa21.97■■□□□ 1.11
SCAMP4-205ENST00000452128 MTHFSP49914 203 aa21.96■■□□□ 1.11
SCAMP4-205ENST00000452128 ACSBG1Q96GR2 724 aa21.96■■□□□ 1.11
SCAMP4-205ENST00000452128 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.96■■□□□ 1.11
SCAMP4-205ENST00000452128 SHANK3Q9BYB0 1731 aa21.96■■□□□ 1.11
SCAMP4-205ENST00000452128 NKX1-1Q15270 411 aaPredicted RBP21.94■■□□□ 1.1
SCAMP4-205ENST00000452128 PLEKHG2Q9H7P9 1386 aa21.93■■□□□ 1.1
SCAMP4-205ENST00000452128 PRIM1P49642 420 aaKnown RBP21.92■■□□□ 1.1
SCAMP4-205ENST00000452128 NHSQ6T4R5 1651 aa21.91■■□□□ 1.1
SCAMP4-205ENST00000452128 RREB1Q92766 1687 aa21.91■■□□□ 1.1
SCAMP4-205ENST00000452128 RGPD3A6NKT7 1758 aaPredicted RBP21.9■■□□□ 1.1
SCAMP4-205ENST00000452128 RGPD4Q7Z3J3 1758 aa21.9■■□□□ 1.1
SCAMP4-205ENST00000452128 PCDH11XQ9BZA7 1347 aa21.9■■□□□ 1.1
SCAMP4-205ENST00000452128 PCDH11YQ9BZA8 1340 aa21.9■■□□□ 1.1
SCAMP4-205ENST00000452128 KDRP35968 1356 aa21.89■■□□□ 1.1
SCAMP4-205ENST00000452128 TXNRD1Q16881 649 aa21.89■■□□□ 1.09
SCAMP4-205ENST00000452128 AEBP1Q8IUX7 1158 aa21.89■■□□□ 1.09
SCAMP4-205ENST00000452128 PKD1L3Q7Z443 1732 aa21.88■■□□□ 1.09
SCAMP4-205ENST00000452128 PSDA5PKW4 1024 aaPredicted RBP21.87■■□□□ 1.09
SCAMP4-205ENST00000452128 R3HDM1Q15032 1099 aaKnown RBP21.87■■□□□ 1.09
SCAMP4-205ENST00000452128 SPG7Q9UQ90 795 aa21.87■■□□□ 1.09
SCAMP4-205ENST00000452128 NUP188Q5SRE5 1749 aa21.86■■□□□ 1.09
SCAMP4-205ENST00000452128 COL3A1P02461 1466 aaPredicted RBP21.86■■□□□ 1.09
SCAMP4-205ENST00000452128 ANO8Q9HCE9 1232 aaPredicted RBP21.86■■□□□ 1.09
SCAMP4-205ENST00000452128 PHKG2P15735 406 aa21.85■■□□□ 1.09
SCAMP4-205ENST00000452128 LRRC4BQ9NT99 713 aa21.85■■□□□ 1.09
SCAMP4-205ENST00000452128 SULT6B1Q6IMI4 303 aa21.84■■□□□ 1.09
SCAMP4-205ENST00000452128 BTAF1O14981 1849 aa21.83■■□□□ 1.08
SCAMP4-205ENST00000452128 PPP2R1AP30153 589 aa21.82■■□□□ 1.08
SCAMP4-205ENST00000452128 IFNL2Q8IZJ0 200 aa21.82■■□□□ 1.08
SCAMP4-205ENST00000452128 DIAPH1O60610 1272 aaKnown RBP21.81■■□□□ 1.08
SCAMP4-205ENST00000452128 NBPF14Q5TI25 921 aa21.81■■□□□ 1.08
SCAMP4-205ENST00000452128 ZEB1P37275 1124 aaPredicted RBP21.8■■□□□ 1.08
SCAMP4-205ENST00000452128 CNGB1Q14028 1251 aaPredicted RBP21.8■■□□□ 1.08
SCAMP4-205ENST00000452128 AMOTQ4VCS5 1084 aa21.8■■□□□ 1.08
SCAMP4-205ENST00000452128 PLEKHO1Q53GL0 409 aaPredicted RBP21.8■■□□□ 1.08
SCAMP4-205ENST00000452128 PIGBQ92521 554 aa21.79■■□□□ 1.08
SCAMP4-205ENST00000452128 SYTL4Q96C24 671 aaPredicted RBP21.79■■□□□ 1.08
SCAMP4-205ENST00000452128 KAT6BQ8WYB5 2073 aa21.78■■□□□ 1.08
SCAMP4-205ENST00000452128 DOT1LQ8TEK3 1739 aa21.78■■□□□ 1.08
SCAMP4-205ENST00000452128 SLC27A3Q5K4L6 730 aa21.78■■□□□ 1.08
SCAMP4-205ENST00000452128 TOGARAM1Q9Y4F4 1720 aa21.77■■□□□ 1.08
SCAMP4-205ENST00000452128 DDX10Q13206 875 aaKnown RBP21.75■■□□□ 1.07
SCAMP4-205ENST00000452128 SLC15A2Q16348 729 aa21.75■■□□□ 1.07
SCAMP4-205ENST00000452128 MPRIPQ6WCQ1 1025 aa21.75■■□□□ 1.07
SCAMP4-205ENST00000452128 AKT1S1Q96B36 256 aa21.75■■□□□ 1.07
SCAMP4-205ENST00000452128 PDGFDQ9GZP0 370 aaPredicted RBP21.75■■□□□ 1.07
SCAMP4-205ENST00000452128 PAPPAQ13219 1627 aa21.75■■□□□ 1.07
SCAMP4-205ENST00000452128 HMOX1P09601 288 aa21.74■■□□□ 1.07
SCAMP4-205ENST00000452128 KCNQ4P56696 695 aa21.74■■□□□ 1.07
SCAMP4-205ENST00000452128 ZNF530Q6P9A1 599 aaPredicted RBP21.74■■□□□ 1.07
SCAMP4-205ENST00000452128 DCAF5Q96JK2 942 aa21.74■■□□□ 1.07
SCAMP4-205ENST00000452128 KDM6AO15550 1401 aaPredicted RBP21.73■■□□□ 1.07
SCAMP4-205ENST00000452128 ERVV-2B6SEH9 535 aa21.73■■□□□ 1.07
SCAMP4-205ENST00000452128 ZNF827Q17R98 1081 aa21.73■■□□□ 1.07
SCAMP4-205ENST00000452128 HSP90AB1P08238 724 aaKnown RBP21.71■■□□□ 1.07
SCAMP4-205ENST00000452128 LY75O60449 1722 aa21.71■■□□□ 1.07
SCAMP4-205ENST00000452128 MTHFSDQ2M296 383 aaKnown RBP21.7■■□□□ 1.06
SCAMP4-205ENST00000452128 ATG3Q9NT62 314 aa21.7■■□□□ 1.06
SCAMP4-205ENST00000452128 STK32BQ9NY57 414 aa21.7■■□□□ 1.06
SCAMP4-205ENST00000452128 ASAP1Q9ULH1 1129 aa21.7■■□□□ 1.06
SCAMP4-205ENST00000452128 SMARCC1Q92922 1105 aaPredicted RBP21.69■■□□□ 1.06
SCAMP4-205ENST00000452128 PALLDQ8WX93 1383 aa21.69■■□□□ 1.06
SCAMP4-205ENST00000452128 ITGB4P16144 1822 aa21.69■■□□□ 1.06
SCAMP4-205ENST00000452128 AKAP4Q5JQC9 854 aa21.68■■□□□ 1.06
SCAMP4-205ENST00000452128 CFAP53Q96M91 514 aa21.68■■□□□ 1.06
SCAMP4-205ENST00000452128 RSPH6AQ9H0K4 717 aa21.68■■□□□ 1.06
SCAMP4-205ENST00000452128 TMOD3Q9NYL9 352 aa21.68■■□□□ 1.06
SCAMP4-205ENST00000452128 CCNL1Q9UK58 526 aaPredicted RBP21.68■■□□□ 1.06
SCAMP4-205ENST00000452128 LRP5O75197 1615 aa21.68■■□□□ 1.06
SCAMP4-205ENST00000452128 U2SURPO15042 1029 aaKnown RBP21.66■■□□□ 1.06
SCAMP4-205ENST00000452128 PHACTR3Q96KR7 559 aa21.66■■□□□ 1.06
SCAMP4-205ENST00000452128 LGR6Q9HBX8 967 aa21.66■■□□□ 1.06
SCAMP4-205ENST00000452128 CASZ1Q86V15 1759 aa21.66■■□□□ 1.06
SCAMP4-205ENST00000452128 RALBP1Q15311 655 aa21.65■■□□□ 1.06
SCAMP4-205ENST00000452128 C1orf141Q5JVX7 400 aa21.65■■□□□ 1.06
SCAMP4-205ENST00000452128 SLC4A9Q96Q91 983 aa21.65■■□□□ 1.06
SCAMP4-205ENST00000452128 LOC102724428A0A0B4J2F2 783 aa21.63■■□□□ 1.05
SCAMP4-205ENST00000452128 RNMTO43148 476 aaKnown RBP21.63■■□□□ 1.05
SCAMP4-205ENST00000452128 FCHSD2O94868 740 aa21.63■■□□□ 1.05
SCAMP4-205ENST00000452128 SIK1P57059 783 aa21.63■■□□□ 1.05
SCAMP4-205ENST00000452128 NFATC2IPQ8NCF5 419 aa21.63■■□□□ 1.05
SCAMP4-205ENST00000452128 SGIP1Q9BQI5 828 aa21.63■■□□□ 1.05
SCAMP4-205ENST00000452128 NUDCQ9Y266 331 aa21.63■■□□□ 1.05
SCAMP4-205ENST00000452128 PNPLA7Q6ZV29 1317 aa21.62■■□□□ 1.05
SCAMP4-205ENST00000452128 PTGER2P43116 358 aa21.61■■□□□ 1.05
SCAMP4-205ENST00000452128 CABP4P57796 275 aa21.61■■□□□ 1.05
SCAMP4-205ENST00000452128 ITPK1Q13572 414 aa21.61■■□□□ 1.05
SCAMP4-205ENST00000452128 SPON1Q9HCB6 807 aa21.61■■□□□ 1.05
SCAMP4-205ENST00000452128 ADAMTS7Q9UKP4 1686 aa21.6■■□□□ 1.05
SCAMP4-205ENST00000452128 U2AF1L5P0DN76 240 aaPredicted RBP21.6■■□□□ 1.05
SCAMP4-205ENST00000452128 PRKAR2BP31323 418 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms