RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 LTN1O94822 1766 aa11.9□□□□□ -0.5
COL8A1-203ENST00000452013 EN1Q05925 392 aaPredicted RBP11.9□□□□□ -0.5
COL8A1-203ENST00000452013 IFNL2Q8IZJ0 200 aa11.9□□□□□ -0.5
COL8A1-203ENST00000452013 ACSBG1Q96GR2 724 aa11.9□□□□□ -0.5
COL8A1-203ENST00000452013 PEAK1Q9H792 1746 aa11.89□□□□□ -0.51
COL8A1-203ENST00000452013 PLSCR1O15162 318 aa11.89□□□□□ -0.51
COL8A1-203ENST00000452013 PARD3Q8TEW0 1356 aa11.89□□□□□ -0.51
COL8A1-203ENST00000452013 PLEKHG2Q9H7P9 1386 aa11.89□□□□□ -0.51
COL8A1-203ENST00000452013 NCAPD2Q15021 1401 aa11.88□□□□□ -0.51
COL8A1-203ENST00000452013 MEGF6O75095 1541 aa11.88□□□□□ -0.51
COL8A1-203ENST00000452013 CYP27B1O15528 508 aa11.88□□□□□ -0.51
COL8A1-203ENST00000452013 KCNQ2O43526 872 aa11.88□□□□□ -0.51
COL8A1-203ENST00000452013 HSP90AB1P08238 724 aaKnown RBP11.88□□□□□ -0.51
COL8A1-203ENST00000452013 HMOX1P09601 288 aa11.88□□□□□ -0.51
COL8A1-203ENST00000452013 PRIM1P49642 420 aaKnown RBP11.88□□□□□ -0.51
COL8A1-203ENST00000452013 NKX1-1Q15270 411 aaPredicted RBP11.88□□□□□ -0.51
COL8A1-203ENST00000452013 AEBP1Q8IUX7 1158 aa11.88□□□□□ -0.51
COL8A1-203ENST00000452013 SYTL4Q96C24 671 aaPredicted RBP11.88□□□□□ -0.51
COL8A1-203ENST00000452013 ANKRD26Q9UPS8 1709 aa11.87□□□□□ -0.51
COL8A1-203ENST00000452013 PHKG2P15735 406 aa11.87□□□□□ -0.51
COL8A1-203ENST00000452013 EZH2Q15910 746 aaKnown RBP11.87□□□□□ -0.51
COL8A1-203ENST00000452013 C1orf141Q5JVX7 400 aa11.87□□□□□ -0.51
COL8A1-203ENST00000452013 CAMKK2Q96RR4 588 aa11.87□□□□□ -0.51
COL8A1-203ENST00000452013 RGPD5Q99666 1765 aa11.87□□□□□ -0.51
COL8A1-203ENST00000452013 MYBBP1AQ9BQG0 1328 aaKnown RBP11.86□□□□□ -0.51
COL8A1-203ENST00000452013 PARP4Q9UKK3 1724 aaKnown RBP11.86□□□□□ -0.51
COL8A1-203ENST00000452013 U2AF1L5P0DN76 240 aaPredicted RBP11.86□□□□□ -0.51
COL8A1-203ENST00000452013 U2AF1Q01081 240 aaKnown RBP eCLIP11.86□□□□□ -0.51
COL8A1-203ENST00000452013 ZNF530Q6P9A1 599 aaPredicted RBP11.86□□□□□ -0.51
COL8A1-203ENST00000452013 PRKRIP1Q9H875 184 aaPredicted RBP11.86□□□□□ -0.51
COL8A1-203ENST00000452013 KDRP35968 1356 aa11.86□□□□□ -0.51
COL8A1-203ENST00000452013 FAM208AQ9UK61 1670 aaKnown RBP11.86□□□□□ -0.51
COL8A1-203ENST00000452013 FCHSD2O94868 740 aa11.85□□□□□ -0.51
COL8A1-203ENST00000452013 NBPF14Q5TI25 921 aa11.85□□□□□ -0.51
COL8A1-203ENST00000452013 PTF1AQ7RTS3 328 aa11.85□□□□□ -0.51
COL8A1-203ENST00000452013 PNNQ9H307 717 aaKnown RBP11.85□□□□□ -0.51
COL8A1-203ENST00000452013 NEFMP07197 916 aa11.84□□□□□ -0.51
COL8A1-203ENST00000452013 HMGB2P26583 209 aaKnown RBP11.84□□□□□ -0.51
COL8A1-203ENST00000452013 DCAF5Q96JK2 942 aa11.84□□□□□ -0.51
COL8A1-203ENST00000452013 BRWD3Q6RI45 1802 aa11.83□□□□□ -0.51
COL8A1-203ENST00000452013 LRRC37A3O60309 1634 aa11.83□□□□□ -0.52
COL8A1-203ENST00000452013 ERVV-2B6SEH9 535 aa11.83□□□□□ -0.52
COL8A1-203ENST00000452013 ANP32CO43423 234 aa11.83□□□□□ -0.52
COL8A1-203ENST00000452013 AKAP4Q5JQC9 854 aa11.83□□□□□ -0.52
COL8A1-203ENST00000452013 MPRIPQ6WCQ1 1025 aa11.83□□□□□ -0.52
COL8A1-203ENST00000452013 GAS2L2Q8NHY3 880 aa11.83□□□□□ -0.52
COL8A1-203ENST00000452013 MAP2P11137 1827 aaKnown RBP11.83□□□□□ -0.52
COL8A1-203ENST00000452013 TXNRD1Q16881 649 aa11.82□□□□□ -0.52
COL8A1-203ENST00000452013 MTHFSDQ2M296 383 aaKnown RBP11.82□□□□□ -0.52
COL8A1-203ENST00000452013 SMARCC1Q92922 1105 aaPredicted RBP11.82□□□□□ -0.52
COL8A1-203ENST00000452013 TMOD3Q9NYL9 352 aa11.82□□□□□ -0.52
COL8A1-203ENST00000452013 PRKAR2BP31323 418 aa11.81□□□□□ -0.52
COL8A1-203ENST00000452013 CABP4P57796 275 aa11.81□□□□□ -0.52
COL8A1-203ENST00000452013 PROM2Q8N271 834 aa11.81□□□□□ -0.52
COL8A1-203ENST00000452013 RSPH6AQ9H0K4 717 aa11.81□□□□□ -0.52
COL8A1-203ENST00000452013 SLC27A3Q5K4L6 730 aa11.8□□□□□ -0.52
COL8A1-203ENST00000452013 PIGBQ92521 554 aa11.8□□□□□ -0.52
COL8A1-203ENST00000452013 COL3A1P02461 1466 aaPredicted RBP11.8□□□□□ -0.52
COL8A1-203ENST00000452013 GNAT3A8MTJ3 354 aa11.79□□□□□ -0.52
COL8A1-203ENST00000452013 WDR43Q15061 677 aaKnown RBP eCLIP11.79□□□□□ -0.52
COL8A1-203ENST00000452013 PHACTR3Q96KR7 559 aa11.78□□□□□ -0.52
COL8A1-203ENST00000452013 RNMTO43148 476 aaKnown RBP11.77□□□□□ -0.53
COL8A1-203ENST00000452013 HTATSF1O43719 755 aaKnown RBP11.77□□□□□ -0.53
COL8A1-203ENST00000452013 NFATC2IPQ8NCF5 419 aa11.77□□□□□ -0.53
COL8A1-203ENST00000452013 RTF1Q92541 710 aaKnown RBP11.77□□□□□ -0.53
COL8A1-203ENST00000452013 LGR6Q9HBX8 967 aa11.77□□□□□ -0.53
COL8A1-203ENST00000452013 STK32BQ9NY57 414 aa11.77□□□□□ -0.53
COL8A1-203ENST00000452013 R3HDM1Q15032 1099 aaKnown RBP11.76□□□□□ -0.53
COL8A1-203ENST00000452013 CCNL1Q9UK58 526 aaPredicted RBP11.76□□□□□ -0.53
COL8A1-203ENST00000452013 RGPD1P0DJD0 1748 aa11.76□□□□□ -0.53
COL8A1-203ENST00000452013 MAPK8IP3Q9UPT6 1336 aa11.76□□□□□ -0.53
COL8A1-203ENST00000452013 RGPD2P0DJD1 1756 aa11.75□□□□□ -0.53
COL8A1-203ENST00000452013 WNK3Q9BYP7 1800 aa11.75□□□□□ -0.53
COL8A1-203ENST00000452013 TEFQ10587 303 aa11.75□□□□□ -0.53
COL8A1-203ENST00000452013 PLEKHF1Q96S99 279 aa11.75□□□□□ -0.53
COL8A1-203ENST00000452013 SLC52A2Q9HAB3 445 aa11.75□□□□□ -0.53
COL8A1-203ENST00000452013 ATG3Q9NT62 314 aa11.75□□□□□ -0.53
COL8A1-203ENST00000452013 ASAP1Q9ULH1 1129 aa11.75□□□□□ -0.53
COL8A1-203ENST00000452013 PSDA5PKW4 1024 aaPredicted RBP11.74□□□□□ -0.53
COL8A1-203ENST00000452013 SLC15A2Q16348 729 aa11.74□□□□□ -0.53
COL8A1-203ENST00000452013 IL17REQ8NFR9 667 aa11.74□□□□□ -0.53
COL8A1-203ENST00000452013 LRRC4BQ9NT99 713 aa11.74□□□□□ -0.53
COL8A1-203ENST00000452013 PALLDQ8WX93 1383 aa11.74□□□□□ -0.53
COL8A1-203ENST00000452013 LOC102724428A0A0B4J2F2 783 aa11.73□□□□□ -0.53
COL8A1-203ENST00000452013 SIK1P57059 783 aa11.73□□□□□ -0.53
COL8A1-203ENST00000452013 NFE2L2Q16236 605 aa11.73□□□□□ -0.53
COL8A1-203ENST00000452013 RUNDC1Q96C34 613 aa11.73□□□□□ -0.53
COL8A1-203ENST00000452013 MAP3K5Q99683 1374 aa11.73□□□□□ -0.53
COL8A1-203ENST00000452013 RBM42Q9BTD8 480 aaKnown RBP11.73□□□□□ -0.53
COL8A1-203ENST00000452013 ADAMTS8Q9UP79 889 aa11.73□□□□□ -0.53
COL8A1-203ENST00000452013 KDM6AO15550 1401 aaPredicted RBP11.72□□□□□ -0.53
COL8A1-203ENST00000452013 ATP6V1AP38606 617 aa11.72□□□□□ -0.53
COL8A1-203ENST00000452013 KCNQ4P56696 695 aa11.71□□□□□ -0.53
COL8A1-203ENST00000452013 AKT1S1Q96B36 256 aa11.71□□□□□ -0.53
COL8A1-203ENST00000452013 MRS2Q9HD23 443 aa11.71□□□□□ -0.53
COL8A1-203ENST00000452013 TFCP2L1Q9NZI6 479 aa11.71□□□□□ -0.53
COL8A1-203ENST00000452013 PKD1L3Q7Z443 1732 aa11.71□□□□□ -0.54
COL8A1-203ENST00000452013 NHSQ6T4R5 1651 aa11.71□□□□□ -0.54
COL8A1-203ENST00000452013 PTCD1O75127 700 aaKnown RBP11.7□□□□□ -0.54
COL8A1-203ENST00000452013 RIPK4P57078 832 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms