RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 BRPF3Q9ULD4 1205 aa15.19■□□□□ 0.02
COL27A1-202ENST00000451716 ABCC4O15439 1325 aa15.19■□□□□ 0.02
COL27A1-202ENST00000451716 ABTB2Q8N961 1025 aa15.19■□□□□ 0.02
COL27A1-202ENST00000451716 FLT4P35916 1363 aa15.19■□□□□ 0.02
COL27A1-202ENST00000451716 NALCNQ8IZF0 1738 aa15.19■□□□□ 0.02
COL27A1-202ENST00000451716 SIRT2Q8IXJ6 389 aa15.18■□□□□ 0.02
COL27A1-202ENST00000451716 NUCB1Q02818 461 aa15.18■□□□□ 0.02
COL27A1-202ENST00000451716 ANKRD45Q5TZF3 282 aa15.18■□□□□ 0.02
COL27A1-202ENST00000451716 UPF2Q9HAU5 1272 aaKnown RBP15.18■□□□□ 0.02
COL27A1-202ENST00000451716 SBNO1A3KN83 1393 aa15.18■□□□□ 0.02
COL27A1-202ENST00000451716 RIMS1Q86UR5 1692 aaKnown RBP15.18■□□□□ 0.02
COL27A1-202ENST00000451716 MFAP1P55081 439 aaKnown RBP15.17■□□□□ 0.02
COL27A1-202ENST00000451716 PAXIP1Q6ZW49 1069 aaPredicted RBP15.17■□□□□ 0.02
COL27A1-202ENST00000451716 CHD1LQ86WJ1 897 aa15.17■□□□□ 0.02
COL27A1-202ENST00000451716 PIK3R4Q99570 1358 aa15.17■□□□□ 0.02
COL27A1-202ENST00000451716 RTF1Q92541 710 aaKnown RBP15.16■□□□□ 0.02
COL27A1-202ENST00000451716 TBC1D32Q96NH3 1257 aa15.16■□□□□ 0.02
COL27A1-202ENST00000451716 API5Q9BZZ5 524 aaKnown RBP15.16■□□□□ 0.02
COL27A1-202ENST00000451716 CEP170BQ9Y4F5 1589 aaPredicted RBP15.16■□□□□ 0.02
COL27A1-202ENST00000451716 PIK3C2AO00443 1686 aa15.16■□□□□ 0.02
COL27A1-202ENST00000451716 ARHGEF10O15013 1369 aa15.15■□□□□ 0.02
COL27A1-202ENST00000451716 NFKBIBQ15653 356 aa15.15■□□□□ 0.02
COL27A1-202ENST00000451716 ANKLE2Q86XL3 938 aa15.15■□□□□ 0.02
COL27A1-202ENST00000451716 XRN1Q8IZH2 1706 aaKnown RBP15.15■□□□□ 0.02
COL27A1-202ENST00000451716 RGPD1P0DJD0 1748 aa15.15■□□□□ 0.02
COL27A1-202ENST00000451716 HOXC9P31274 260 aa15.14■□□□□ 0.01
COL27A1-202ENST00000451716 USHBP1Q8N6Y0 703 aa15.14■□□□□ 0.01
COL27A1-202ENST00000451716 TSPYL4Q9UJ04 414 aa15.14■□□□□ 0.01
COL27A1-202ENST00000451716 CRB1P82279 1406 aa15.14■□□□□ 0.01
COL27A1-202ENST00000451716 ZBTB7CA1YPR0 619 aa15.14■□□□□ 0.01
COL27A1-202ENST00000451716 IGSF1Q8N6C5 1336 aa15.14■□□□□ 0.01
COL27A1-202ENST00000451716 SLC4A2P04920 1241 aa15.14■□□□□ 0.01
COL27A1-202ENST00000451716 SLKQ9H2G2 1235 aaPredicted RBP15.13■□□□□ 0.01
COL27A1-202ENST00000451716 PHF8Q9UPP1 1060 aa15.13■□□□□ 0.01
COL27A1-202ENST00000451716 ESCO1Q5FWF5 840 aa15.12■□□□□ 0.01
COL27A1-202ENST00000451716 KDRP35968 1356 aa15.12■□□□□ 0.01
COL27A1-202ENST00000451716 ANKARQ7Z5J8 1434 aa15.11■□□□□ 0.01
COL27A1-202ENST00000451716 G2E3Q7L622 706 aa15.11■□□□□ 0.01
COL27A1-202ENST00000451716 NECTIN2Q92692 538 aa15.11■□□□□ 0.01
COL27A1-202ENST00000451716 CHMP4BQ9H444 224 aaKnown RBP15.11■□□□□ 0.01
COL27A1-202ENST00000451716 FMN2Q9NZ56 1722 aa15.11■□□□□ 0.01
COL27A1-202ENST00000451716 XPCQ01831 940 aaPredicted RBP15.11■□□□□ 0.01
COL27A1-202ENST00000451716 SPRYD3Q8NCJ5 442 aa15.11■□□□□ 0.01
COL27A1-202ENST00000451716 GCC1Q96CN9 775 aa15.11■□□□□ 0.01
COL27A1-202ENST00000451716 C22orf23Q9BZE7 217 aa15.11■□□□□ 0.01
COL27A1-202ENST00000451716 F6X3S4 739 aa15.1■□□□□ 0.01
COL27A1-202ENST00000451716 USP35Q9P2H5 1018 aa15.1■□□□□ 0.01
COL27A1-202ENST00000451716 FRAT2O75474 233 aaPredicted RBP15.1■□□□□ 0.01
COL27A1-202ENST00000451716 BECN1Q14457 450 aa15.1■□□□□ 0.01
COL27A1-202ENST00000451716 GAS2L2Q8NHY3 880 aa15.1■□□□□ 0.01
COL27A1-202ENST00000451716 RGS12O14924 1447 aa15.1■□□□□ 0.01
COL27A1-202ENST00000451716 KIAA0232Q92628 1395 aa15.1■□□□□ 0.01
COL27A1-202ENST00000451716 INTS3Q68E01 1043 aaKnown RBP15.1■□□□□ 0.01
COL27A1-202ENST00000451716 SLC4A10Q6U841 1118 aa15.1■□□□□ 0.01
COL27A1-202ENST00000451716 TBC1D2Q9BYX2 928 aa15.1■□□□□ 0.01
COL27A1-202ENST00000451716 MEIS3Q99687 375 aa15.09■□□□□ 0.01
COL27A1-202ENST00000451716 SETD1BQ9UPS6 1966 aaKnown RBP15.09■□□□□ 0.01
COL27A1-202ENST00000451716 APBB1O00213 710 aa15.09■□□□□ 0.01
COL27A1-202ENST00000451716 PSME1Q06323 249 aa15.09■□□□□ 0.01
COL27A1-202ENST00000451716 MSH6P52701 1360 aa15.08■□□□□ 0.01
COL27A1-202ENST00000451716 GNAT3A8MTJ3 354 aa15.07■□□□□ 0
COL27A1-202ENST00000451716 HAP1P54257 671 aaPredicted RBP15.07■□□□□ 0
COL27A1-202ENST00000451716 HSP90AA2PQ14568 343 aaPredicted RBP15.07■□□□□ 0
COL27A1-202ENST00000451716 IL17REQ8NFR9 667 aa15.07■□□□□ 0
COL27A1-202ENST00000451716 C16orf71Q8IYS4 520 aaPredicted RBP15.07■□□□□ 0
COL27A1-202ENST00000451716 DHX37Q8IY37 1157 aaKnown RBP15.07■□□□□ 0
COL27A1-202ENST00000451716 ORAI2Q96SN7 254 aa15.07■□□□□ 0
COL27A1-202ENST00000451716 LMOD2Q6P5Q4 547 aa15.06■□□□□ 0
COL27A1-202ENST00000451716 MARF1Q9Y4F3 1742 aaKnown RBP15.06■□□□□ 0
COL27A1-202ENST00000451716 BMP2KLQ5H9B9 411 aa15.05■□□□□ 0
COL27A1-202ENST00000451716 PTPRCP08575 1304 aa15.05■□□□□ 0
COL27A1-202ENST00000451716 CEP85Q6P2H3 762 aa15.05■□□□□ -0
COL27A1-202ENST00000451716 NBPF6Q5VWK0 638 aa15.04■□□□□ -0
COL27A1-202ENST00000451716 NBPF4Q96M43 638 aa15.04■□□□□ -0
COL27A1-202ENST00000451716 DCTPP1Q9H773 170 aa15.04■□□□□ -0
COL27A1-202ENST00000451716 CHD2O14647 1828 aaKnown RBP15.04■□□□□ -0
COL27A1-202ENST00000451716 NWD1Q149M9 1564 aa15.04■□□□□ -0
COL27A1-202ENST00000451716 SMARCA5O60264 1052 aaPredicted RBP15.04■□□□□ -0
COL27A1-202ENST00000451716 ANKRD44Q8N8A2 993 aa15.04■□□□□ -0
COL27A1-202ENST00000451716 OTUD7AQ8TE49 926 aaPredicted RBP15.04■□□□□ -0
COL27A1-202ENST00000451716 LRRC59Q96AG4 307 aaKnown RBP15.04■□□□□ -0
COL27A1-202ENST00000451716 ATP10DQ9P241 1426 aa15.03■□□□□ -0
COL27A1-202ENST00000451716 RTL1A6NKG5 1358 aa15.03■□□□□ -0
COL27A1-202ENST00000451716 KIF24Q5T7B8 1368 aa15.03■□□□□ -0
COL27A1-202ENST00000451716 STK31Q9BXU1 1019 aa15.03■□□□□ -0
COL27A1-202ENST00000451716 NAP1L2Q9ULW6 460 aaPredicted RBP15.03■□□□□ -0
COL27A1-202ENST00000451716 MAP3K5Q99683 1374 aa15.02■□□□□ -0
COL27A1-202ENST00000451716 TBC1D9Q6ZT07 1266 aa15.02■□□□□ -0
COL27A1-202ENST00000451716 IP6K1Q92551 441 aa15.02■□□□□ -0
COL27A1-202ENST00000451716 GSPT1P15170 499 aaKnown RBP15.02□□□□□ -0.01
COL27A1-202ENST00000451716 FKBP5Q13451 457 aaPredicted RBP15.02□□□□□ -0.01
COL27A1-202ENST00000451716 PLEKHM2Q8IWE5 1019 aa15.02□□□□□ -0.01
COL27A1-202ENST00000451716 ANTXR1Q9H6X2 564 aa15.01□□□□□ -0.01
COL27A1-202ENST00000451716 HTATSF1O43719 755 aaKnown RBP15.01□□□□□ -0.01
COL27A1-202ENST00000451716 TAF7Q15545 349 aaPredicted RBP15.01□□□□□ -0.01
COL27A1-202ENST00000451716 LGR6Q9HBX8 967 aa15.01□□□□□ -0.01
COL27A1-202ENST00000451716 ADGRL3Q9HAR2 1447 aa15.01□□□□□ -0.01
COL27A1-202ENST00000451716 FLIIQ13045 1269 aa15□□□□□ -0.01
COL27A1-202ENST00000451716 RPAP2Q8IXW5 612 aaPredicted RBP15□□□□□ -0.01
COL27A1-202ENST00000451716 RRP9O43818 475 aaKnown RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms