RNA–Protein interactions for RNA: ENST00000450162.6

SNRNP27-203, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 2

Gene SNRNP27, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-203ENST00000450162 BAG6P46379 1132 aa17.61■□□□□ 0.41
SNRNP27-203ENST00000450162 CNGB1Q14028 1251 aaPredicted RBP17.61■□□□□ 0.41
SNRNP27-203ENST00000450162 CFAP53Q96M91 514 aa17.61■□□□□ 0.41
SNRNP27-203ENST00000450162 DIAPH1O60610 1272 aaKnown RBP17.6■□□□□ 0.41
SNRNP27-203ENST00000450162 TRIM37O94972 964 aa17.6■□□□□ 0.41
SNRNP27-203ENST00000450162 RALBP1Q15311 655 aa17.6■□□□□ 0.41
SNRNP27-203ENST00000450162 SPG7Q9UQ90 795 aa17.6■□□□□ 0.41
SNRNP27-203ENST00000450162 MEGF6O75095 1541 aa17.6■□□□□ 0.41
SNRNP27-203ENST00000450162 PPP2R1AP30153 589 aa17.59■□□□□ 0.41
SNRNP27-203ENST00000450162 DDX54Q8TDD1 881 aaKnown RBP17.59■□□□□ 0.41
SNRNP27-203ENST00000450162 BCL11BQ9C0K0 894 aaPredicted RBP17.59■□□□□ 0.41
SNRNP27-203ENST00000450162 EP400Q96L91 3159 aa17.59■□□□□ 0.41
SNRNP27-203ENST00000450162 RGPD2P0DJD1 1756 aa17.58■□□□□ 0.41
SNRNP27-203ENST00000450162 PARD3Q8TEW0 1356 aa17.58■□□□□ 0.4
SNRNP27-203ENST00000450162 PCDH11XQ9BZA7 1347 aa17.58■□□□□ 0.4
SNRNP27-203ENST00000450162 PCDH11YQ9BZA8 1340 aa17.58■□□□□ 0.4
SNRNP27-203ENST00000450162 NCBP3Q53F19 620 aaKnown RBP17.57■□□□□ 0.4
SNRNP27-203ENST00000450162 KDRP35968 1356 aa17.56■□□□□ 0.4
SNRNP27-203ENST00000450162 AMOTQ4VCS5 1084 aa17.56■□□□□ 0.4
SNRNP27-203ENST00000450162 NUDCQ9Y266 331 aa17.56■□□□□ 0.4
SNRNP27-203ENST00000450162 RGPD1P0DJD0 1748 aa17.55■□□□□ 0.4
SNRNP27-203ENST00000450162 APBA3O96018 575 aa17.55■□□□□ 0.4
SNRNP27-203ENST00000450162 PLEKHO1Q53GL0 409 aaPredicted RBP17.55■□□□□ 0.4
SNRNP27-203ENST00000450162 SULT6B1Q6IMI4 303 aa17.55■□□□□ 0.4
SNRNP27-203ENST00000450162 PLSCR1O15162 318 aa17.54■□□□□ 0.4
SNRNP27-203ENST00000450162 DEFB132Q7Z7B7 95 aa17.53■□□□□ 0.4
SNRNP27-203ENST00000450162 CYP27B1O15528 508 aa17.52■□□□□ 0.4
SNRNP27-203ENST00000450162 NKX1-1Q15270 411 aaPredicted RBP17.52■□□□□ 0.4
SNRNP27-203ENST00000450162 IFNL2Q8IZJ0 200 aa17.52■□□□□ 0.4
SNRNP27-203ENST00000450162 COL3A1P02461 1466 aaPredicted RBP17.51■□□□□ 0.39
SNRNP27-203ENST00000450162 EN1Q05925 392 aaPredicted RBP17.51■□□□□ 0.39
SNRNP27-203ENST00000450162 CAMKK2Q96RR4 588 aa17.51■□□□□ 0.39
SNRNP27-203ENST00000450162 U2SURPO15042 1029 aaKnown RBP17.5■□□□□ 0.39
SNRNP27-203ENST00000450162 HSP90AB1P08238 724 aaKnown RBP17.5■□□□□ 0.39
SNRNP27-203ENST00000450162 AEBP1Q8IUX7 1158 aa17.5■□□□□ 0.39
SNRNP27-203ENST00000450162 ACSBG1Q96GR2 724 aa17.49■□□□□ 0.39
SNRNP27-203ENST00000450162 PKD1L3Q7Z443 1732 aa17.49■□□□□ 0.39
SNRNP27-203ENST00000450162 SBF2Q86WG5 1849 aa17.49■□□□□ 0.39
SNRNP27-203ENST00000450162 MYBBP1AQ9BQG0 1328 aaKnown RBP17.48■□□□□ 0.39
SNRNP27-203ENST00000450162 TNS1Q9HBL0 1735 aaKnown RBP17.48■□□□□ 0.39
SNRNP27-203ENST00000450162 KCNQ2O43526 872 aa17.48■□□□□ 0.39
SNRNP27-203ENST00000450162 PHKG2P15735 406 aa17.48■□□□□ 0.39
SNRNP27-203ENST00000450162 HMOX1P09601 288 aa17.47■□□□□ 0.39
SNRNP27-203ENST00000450162 PRIM1P49642 420 aaKnown RBP17.47■□□□□ 0.39
SNRNP27-203ENST00000450162 C1orf141Q5JVX7 400 aa17.47■□□□□ 0.39
SNRNP27-203ENST00000450162 PRKRIP1Q9H875 184 aaPredicted RBP17.47■□□□□ 0.39
SNRNP27-203ENST00000450162 FCHSD2O94868 740 aa17.46■□□□□ 0.39
SNRNP27-203ENST00000450162 EZH2Q15910 746 aaKnown RBP17.46■□□□□ 0.39
SNRNP27-203ENST00000450162 ZNF530Q6P9A1 599 aaPredicted RBP17.46■□□□□ 0.39
SNRNP27-203ENST00000450162 SYTL4Q96C24 671 aaPredicted RBP17.46■□□□□ 0.39
SNRNP27-203ENST00000450162 DCAF5Q96JK2 942 aa17.46■□□□□ 0.39
SNRNP27-203ENST00000450162 SHANK3Q9BYB0 1731 aa17.46■□□□□ 0.39
SNRNP27-203ENST00000450162 NHSQ6T4R5 1651 aa17.45■□□□□ 0.38
SNRNP27-203ENST00000450162 U2AF1L5P0DN76 240 aaPredicted RBP17.45■□□□□ 0.38
SNRNP27-203ENST00000450162 HMGB2P26583 209 aaKnown RBP17.45■□□□□ 0.38
SNRNP27-203ENST00000450162 U2AF1Q01081 240 aaKnown RBP eCLIP17.45■□□□□ 0.38
SNRNP27-203ENST00000450162 PTF1AQ7RTS3 328 aa17.45■□□□□ 0.38
SNRNP27-203ENST00000450162 PNNQ9H307 717 aaKnown RBP17.44■□□□□ 0.38
SNRNP27-203ENST00000450162 ERVV-2B6SEH9 535 aa17.43■□□□□ 0.38
SNRNP27-203ENST00000450162 AKAP4Q5JQC9 854 aa17.43■□□□□ 0.38
SNRNP27-203ENST00000450162 NBPF14Q5TI25 921 aa17.42■□□□□ 0.38
SNRNP27-203ENST00000450162 GAS2L2Q8NHY3 880 aa17.42■□□□□ 0.38
SNRNP27-203ENST00000450162 KAT6BQ8WYB5 2073 aa17.42■□□□□ 0.38
SNRNP27-203ENST00000450162 RGPD3A6NKT7 1758 aaPredicted RBP17.42■□□□□ 0.38
SNRNP27-203ENST00000450162 RGPD4Q7Z3J3 1758 aa17.42■□□□□ 0.38
SNRNP27-203ENST00000450162 NEFMP07197 916 aa17.41■□□□□ 0.38
SNRNP27-203ENST00000450162 TXNRD1Q16881 649 aa17.41■□□□□ 0.38
SNRNP27-203ENST00000450162 SLC27A3Q5K4L6 730 aa17.41■□□□□ 0.38
SNRNP27-203ENST00000450162 SMARCC1Q92922 1105 aaPredicted RBP17.41■□□□□ 0.38
SNRNP27-203ENST00000450162 RSPH6AQ9H0K4 717 aa17.41■□□□□ 0.38
SNRNP27-203ENST00000450162 PRKAR2BP31323 418 aa17.4■□□□□ 0.38
SNRNP27-203ENST00000450162 MTHFSDQ2M296 383 aaKnown RBP17.4■□□□□ 0.38
SNRNP27-203ENST00000450162 MPRIPQ6WCQ1 1025 aa17.4■□□□□ 0.38
SNRNP27-203ENST00000450162 TMOD3Q9NYL9 352 aa17.4■□□□□ 0.38
SNRNP27-203ENST00000450162 PROM2Q8N271 834 aa17.39■□□□□ 0.37
SNRNP27-203ENST00000450162 ANP32CO43423 234 aa17.38■□□□□ 0.37
SNRNP27-203ENST00000450162 PIGBQ92521 554 aa17.38■□□□□ 0.37
SNRNP27-203ENST00000450162 DOT1LQ8TEK3 1739 aa17.38■□□□□ 0.37
SNRNP27-203ENST00000450162 HOXD11P31277 338 aaPredicted RBP17.37■□□□□ 0.37
SNRNP27-203ENST00000450162 CABP4P57796 275 aa17.37■□□□□ 0.37
SNRNP27-203ENST00000450162 RNF216Q9NWF9 866 aaPredicted RBP17.37■□□□□ 0.37
SNRNP27-203ENST00000450162 BTAF1O14981 1849 aa17.37■□□□□ 0.37
SNRNP27-203ENST00000450162 GNAT3A8MTJ3 354 aa17.36■□□□□ 0.37
SNRNP27-203ENST00000450162 PHACTR3Q96KR7 559 aa17.35■□□□□ 0.37
SNRNP27-203ENST00000450162 RREB1Q92766 1687 aa17.35■□□□□ 0.37
SNRNP27-203ENST00000450162 KDM6AO15550 1401 aaPredicted RBP17.34■□□□□ 0.37
SNRNP27-203ENST00000450162 RNMTO43148 476 aaKnown RBP17.34■□□□□ 0.37
SNRNP27-203ENST00000450162 HTATSF1O43719 755 aaKnown RBP17.34■□□□□ 0.37
SNRNP27-203ENST00000450162 PALLDQ8WX93 1383 aa17.33■□□□□ 0.36
SNRNP27-203ENST00000450162 MAP3K5Q99683 1374 aa17.33■□□□□ 0.36
SNRNP27-203ENST00000450162 WDR43Q15061 677 aaKnown RBP eCLIP17.33■□□□□ 0.36
SNRNP27-203ENST00000450162 NFATC2IPQ8NCF5 419 aa17.32■□□□□ 0.36
SNRNP27-203ENST00000450162 PLEKHF1Q96S99 279 aa17.32■□□□□ 0.36
SNRNP27-203ENST00000450162 SLC52A2Q9HAB3 445 aa17.32■□□□□ 0.36
SNRNP27-203ENST00000450162 STK32BQ9NY57 414 aa17.32■□□□□ 0.36
SNRNP27-203ENST00000450162 CCNL1Q9UK58 526 aaPredicted RBP17.32■□□□□ 0.36
SNRNP27-203ENST00000450162 TOGARAM1Q9Y4F4 1720 aa17.32■□□□□ 0.36
SNRNP27-203ENST00000450162 MAPK8IP3Q9UPT6 1336 aa17.31■□□□□ 0.36
SNRNP27-203ENST00000450162 RTF1Q92541 710 aaKnown RBP17.31■□□□□ 0.36
SNRNP27-203ENST00000450162 LGR6Q9HBX8 967 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms