RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 AKT1S1Q96B36 256 aa24.43■■□□□ 1.5
FAM3A-216ENST00000449971 LTN1O94822 1766 aa24.42■■□□□ 1.5
FAM3A-216ENST00000449971 MON2Q7Z3U7 1717 aa24.42■■□□□ 1.5
FAM3A-216ENST00000449971 NLGN2Q8NFZ4 835 aa24.41■■□□□ 1.5
FAM3A-216ENST00000449971 PNPLA7Q6ZV29 1317 aa24.4■■□□□ 1.5
FAM3A-216ENST00000449971 MSH5O43196 834 aa24.4■■□□□ 1.5
FAM3A-216ENST00000449971 SLC27A3Q5K4L6 730 aa24.4■■□□□ 1.5
FAM3A-216ENST00000449971 SLC16A10Q8TF71 515 aa24.39■■□□□ 1.49
FAM3A-216ENST00000449971 PRIM1P49642 420 aaKnown RBP24.38■■□□□ 1.49
FAM3A-216ENST00000449971 ANKRD36BQ8N2N9 1353 aa24.37■■□□□ 1.49
FAM3A-216ENST00000449971 EIF4G2P78344 907 aaKnown RBP eCLIP24.36■■□□□ 1.49
FAM3A-216ENST00000449971 COG3Q96JB2 828 aa24.35■■□□□ 1.49
FAM3A-216ENST00000449971 IP6K1Q92551 441 aa24.34■■□□□ 1.49
FAM3A-216ENST00000449971 HSPA5P11021 654 aaKnown RBP24.33■■□□□ 1.49
FAM3A-216ENST00000449971 MSL1Q68DK7 614 aa24.33■■□□□ 1.49
FAM3A-216ENST00000449971 POLR3GLQ9BT43 218 aa24.33■■□□□ 1.49
FAM3A-216ENST00000449971 CEP350Q5VT06 3117 aa24.33■■□□□ 1.49
FAM3A-216ENST00000449971 CCNL1Q9UK58 526 aaPredicted RBP24.32■■□□□ 1.48
FAM3A-216ENST00000449971 FBLN1P23142 703 aa24.31■■□□□ 1.48
FAM3A-216ENST00000449971 USP54Q70EL1 1684 aa24.3■■□□□ 1.48
FAM3A-216ENST00000449971 YBX3P16989 372 aaKnown RBP eCLIP24.3■■□□□ 1.486e-6■□□□□ 10.6
FAM3A-216ENST00000449971 AMPHP49418 695 aa24.3■■□□□ 1.48
FAM3A-216ENST00000449971 TUBGCP6Q96RT7 1819 aa24.3■■□□□ 1.48
FAM3A-216ENST00000449971 GGNBP2Q9H3C7 697 aa24.29■■□□□ 1.48
FAM3A-216ENST00000449971 FYB1O15117 783 aa24.28■■□□□ 1.48
FAM3A-216ENST00000449971 ZCRB1Q8TBF4 217 aaKnown RBP24.28■■□□□ 1.48
FAM3A-216ENST00000449971 DOT1LQ8TEK3 1739 aa24.27■■□□□ 1.48
FAM3A-216ENST00000449971 COL23A1Q86Y22 540 aaPredicted RBP24.27■■□□□ 1.48
FAM3A-216ENST00000449971 QSER1Q2KHR3 1735 aa24.27■■□□□ 1.48
FAM3A-216ENST00000449971 HOXC9P31274 260 aa24.26■■□□□ 1.47
FAM3A-216ENST00000449971 CARD14Q9BXL6 1004 aa24.26■■□□□ 1.47
FAM3A-216ENST00000449971 MAP3K19Q56UN5 1328 aa24.26■■□□□ 1.47
FAM3A-216ENST00000449971 NSD2O96028 1365 aa24.26■■□□□ 1.47
FAM3A-216ENST00000449971 GRIN3BO60391 1043 aa24.25■■□□□ 1.47
FAM3A-216ENST00000449971 SHANK3Q9BYB0 1731 aa24.24■■□□□ 1.47
FAM3A-216ENST00000449971 USHBP1Q8N6Y0 703 aa24.24■■□□□ 1.47
FAM3A-216ENST00000449971 MEGF6O75095 1541 aa24.22■■□□□ 1.47
FAM3A-216ENST00000449971 ZNF526Q8TF50 670 aaPredicted RBP24.22■■□□□ 1.47
FAM3A-216ENST00000449971 FAM208AQ9UK61 1670 aaKnown RBP24.21■■□□□ 1.47
FAM3A-216ENST00000449971 IFFO2Q5TF58 517 aa24.21■■□□□ 1.47
FAM3A-216ENST00000449971 WWC3Q9ULE0 1092 aa24.21■■□□□ 1.47
FAM3A-216ENST00000449971 RGPD2P0DJD1 1756 aa24.21■■□□□ 1.47
FAM3A-216ENST00000449971 RRS1Q15050 365 aaKnown RBP24.2■■□□□ 1.46
FAM3A-216ENST00000449971 COL24A1Q17RW2 1714 aa24.2■■□□□ 1.46
FAM3A-216ENST00000449971 NSD3Q9BZ95 1437 aa24.19■■□□□ 1.46
FAM3A-216ENST00000449971 LY75O60449 1722 aa24.19■■□□□ 1.46
FAM3A-216ENST00000449971 ATP10DQ9P241 1426 aa24.18■■□□□ 1.46
FAM3A-216ENST00000449971 NBPF6Q5VWK0 638 aa24.18■■□□□ 1.46
FAM3A-216ENST00000449971 RAPGEF4Q8WZA2 1011 aa24.18■■□□□ 1.46
FAM3A-216ENST00000449971 NBPF4Q96M43 638 aa24.18■■□□□ 1.46
FAM3A-216ENST00000449971 GPBP1L1Q9HC44 474 aaPredicted RBP24.16■■□□□ 1.46
FAM3A-216ENST00000449971 MPRIPQ6WCQ1 1025 aa24.14■■□□□ 1.45
FAM3A-216ENST00000449971 CGNL1Q0VF96 1302 aa24.13■■□□□ 1.45
FAM3A-216ENST00000449971 TATP17735 454 aaPredicted RBP24.13■■□□□ 1.45
FAM3A-216ENST00000449971 PANK3Q9H999 370 aa24.13■■□□□ 1.45
FAM3A-216ENST00000449971 PHF14O94880 888 aa24.12■■□□□ 1.45
FAM3A-216ENST00000449971 SMIM5Q71RC9 77 aa24.12■■□□□ 1.45
FAM3A-216ENST00000449971 CD2APQ9Y5K6 639 aa24.11■■□□□ 1.45
FAM3A-216ENST00000449971 PALLDQ8WX93 1383 aa24.11■■□□□ 1.45
FAM3A-216ENST00000449971 SMG6Q86US8 1419 aaKnown RBP24.1■■□□□ 1.45
FAM3A-216ENST00000449971 AK7Q96M32 723 aa24.1■■□□□ 1.45
FAM3A-216ENST00000449971 RTL1A6NKG5 1358 aa24.09■■□□□ 1.45
FAM3A-216ENST00000449971 FLAD1Q8NFF5 587 aa24.08■■□□□ 1.45
FAM3A-216ENST00000449971 C5P01031 1676 aa24.08■■□□□ 1.44
FAM3A-216ENST00000449971 PCDH11XQ9BZA7 1347 aa24.08■■□□□ 1.44
FAM3A-216ENST00000449971 PCDH11YQ9BZA8 1340 aa24.08■■□□□ 1.44
FAM3A-216ENST00000449971 HSP90AB2PQ58FF8 381 aa24.07■■□□□ 1.44
FAM3A-216ENST00000449971 AMIGO3Q86WK7 504 aa24.07■■□□□ 1.44
FAM3A-216ENST00000449971 PPM1GO15355 546 aaPredicted RBP24.06■■□□□ 1.44
FAM3A-216ENST00000449971 EMILIN1Q9Y6C2 1016 aa24.06■■□□□ 1.44
FAM3A-216ENST00000449971 IGSF1Q8N6C5 1336 aa24.06■■□□□ 1.44
FAM3A-216ENST00000449971 KIF20BQ96Q89 1820 aa24.05■■□□□ 1.44
FAM3A-216ENST00000449971 HSPA6P17066 643 aa24.04■■□□□ 1.44
FAM3A-216ENST00000449971 CYP27B1O15528 508 aa24.03■■□□□ 1.44
FAM3A-216ENST00000449971 TNNT2P45379 298 aaPredicted RBP24.03■■□□□ 1.44
FAM3A-216ENST00000449971 INSRP06213 1382 aa24.03■■□□□ 1.44
FAM3A-216ENST00000449971 FLT4P35916 1363 aa24.03■■□□□ 1.44
FAM3A-216ENST00000449971 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.02■■□□□ 1.44
FAM3A-216ENST00000449971 KIF7Q2M1P5 1343 aa24.02■■□□□ 1.44
FAM3A-216ENST00000449971 SMARCC1Q92922 1105 aaPredicted RBP24.01■■□□□ 1.43
FAM3A-216ENST00000449971 ADCY9O60503 1353 aa24.01■■□□□ 1.43
FAM3A-216ENST00000449971 KIF24Q5T7B8 1368 aa24.01■■□□□ 1.43
FAM3A-216ENST00000449971 C4BP0C0L5 1744 aa24■■□□□ 1.43
FAM3A-216ENST00000449971 TAF1LQ8IZX4 1826 aa24■■□□□ 1.43
FAM3A-216ENST00000449971 HMGB2P26583 209 aaKnown RBP23.99■■□□□ 1.43
FAM3A-216ENST00000449971 PIGBQ92521 554 aa23.99■■□□□ 1.43
FAM3A-216ENST00000449971 POLKQ9UBT6 870 aa23.99■■□□□ 1.43
FAM3A-216ENST00000449971 KNSTRNQ9Y448 316 aa23.99■■□□□ 1.43
FAM3A-216ENST00000449971 WASHC2AQ641Q2 1341 aa23.96■■□□□ 1.43
FAM3A-216ENST00000449971 MORC1Q86VD1 984 aa23.96■■□□□ 1.43
FAM3A-216ENST00000449971 LINC00116Q8NCU8 138 aa23.96■■□□□ 1.43
FAM3A-216ENST00000449971 LOC102724428A0A0B4J2F2 783 aa23.95■■□□□ 1.42
FAM3A-216ENST00000449971 GNPATO15228 680 aa23.95■■□□□ 1.42
FAM3A-216ENST00000449971 SIK1P57059 783 aa23.95■■□□□ 1.42
FAM3A-216ENST00000449971 TOGARAM1Q9Y4F4 1720 aa23.95■■□□□ 1.42
FAM3A-216ENST00000449971 ITGB4P16144 1822 aa23.94■■□□□ 1.42
FAM3A-216ENST00000449971 SSFA2P28290 1259 aa23.93■■□□□ 1.42
FAM3A-216ENST00000449971 UBR3Q6ZT12 1888 aa23.92■■□□□ 1.42
FAM3A-216ENST00000449971 TMOD3Q9NYL9 352 aa23.92■■□□□ 1.42
FAM3A-216ENST00000449971 ASAP1Q9ULH1 1129 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms