RNA–Protein interactions for RNA: ENST00000449891.5

UBE2F-SCLY-202, Transcript of UBE2F-SCLY readthrough (NMD candidate), humanhuman

APPRIS ALT2 TSL 2

Gene UBE2F-SCLY, Length 2,902 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-SCLY-202ENST00000449891 CDC45O75419 566 aa16.36■□□□□ 0.21
UBE2F-SCLY-202ENST00000449891 EID1Q9Y6B2 187 aa16.36■□□□□ 0.21
UBE2F-SCLY-202ENST00000449891 MEIS3Q99687 375 aa16.35■□□□□ 0.21
UBE2F-SCLY-202ENST00000449891 PIK3C2BO00750 1634 aa16.35■□□□□ 0.21
UBE2F-SCLY-202ENST00000449891 CAVIN1Q6NZI2 390 aaKnown RBP16.35■□□□□ 0.21
UBE2F-SCLY-202ENST00000449891 COG3Q96JB2 828 aa16.35■□□□□ 0.21
UBE2F-SCLY-202ENST00000449891 IFT57Q9NWB7 429 aa16.35■□□□□ 0.21
UBE2F-SCLY-202ENST00000449891 PNPLA6Q8IY17 1366 aa16.35■□□□□ 0.21
UBE2F-SCLY-202ENST00000449891 CFAP44Q96MT7 982 aa16.34■□□□□ 0.21
UBE2F-SCLY-202ENST00000449891 USP32Q8NFA0 1604 aa16.34■□□□□ 0.21
UBE2F-SCLY-202ENST00000449891 FAM135BQ49AJ0 1406 aa16.34■□□□□ 0.21
UBE2F-SCLY-202ENST00000449891 FOXO3O43524 673 aa16.34■□□□□ 0.21
UBE2F-SCLY-202ENST00000449891 BAG4O95429 457 aaKnown RBP16.34■□□□□ 0.21
UBE2F-SCLY-202ENST00000449891 RBM27Q9P2N5 1060 aaKnown RBP16.34■□□□□ 0.21
UBE2F-SCLY-202ENST00000449891 UBR1Q8IWV7 1749 aa16.33■□□□□ 0.21
UBE2F-SCLY-202ENST00000449891 DTNBO60941 627 aa16.33■□□□□ 0.21
UBE2F-SCLY-202ENST00000449891 CLCN1P35523 988 aa16.33■□□□□ 0.2
UBE2F-SCLY-202ENST00000449891 NCBP3Q53F19 620 aaKnown RBP16.33■□□□□ 0.2
UBE2F-SCLY-202ENST00000449891 SDSP20132 328 aa16.32■□□□□ 0.2
UBE2F-SCLY-202ENST00000449891 NUDT16Q96DE0 195 aaKnown RBP16.32■□□□□ 0.2
UBE2F-SCLY-202ENST00000449891 TMEM2Q9UHN6 1383 aa16.32■□□□□ 0.2
UBE2F-SCLY-202ENST00000449891 ABCC4O15439 1325 aa16.32■□□□□ 0.2
UBE2F-SCLY-202ENST00000449891 HSP90AB2PQ58FF8 381 aa16.32■□□□□ 0.2
UBE2F-SCLY-202ENST00000449891 MAP2P11137 1827 aaKnown RBP16.31■□□□□ 0.2
UBE2F-SCLY-202ENST00000449891 PRPF40AO75400 957 aaKnown RBP16.31■□□□□ 0.2
UBE2F-SCLY-202ENST00000449891 SLC4A2P04920 1241 aa16.31■□□□□ 0.2
UBE2F-SCLY-202ENST00000449891 ZNF853P0CG23 659 aa16.31■□□□□ 0.2
UBE2F-SCLY-202ENST00000449891 LTKP29376 864 aa16.31■□□□□ 0.2
UBE2F-SCLY-202ENST00000449891 G2E3Q7L622 706 aa16.31■□□□□ 0.2
UBE2F-SCLY-202ENST00000449891 API5Q9BZZ5 524 aaKnown RBP16.31■□□□□ 0.2
UBE2F-SCLY-202ENST00000449891 TTC22Q5TAA0 569 aa16.31■□□□□ 0.2
UBE2F-SCLY-202ENST00000449891 EXOC6BQ9Y2D4 811 aa16.31■□□□□ 0.2
UBE2F-SCLY-202ENST00000449891 NCOA3Q9Y6Q9 1424 aa16.31■□□□□ 0.2
UBE2F-SCLY-202ENST00000449891 NASPP49321 788 aaPredicted RBP16.3■□□□□ 0.2
UBE2F-SCLY-202ENST00000449891 WASLO00401 505 aaPredicted RBP16.3■□□□□ 0.2
UBE2F-SCLY-202ENST00000449891 HDGFP51858 240 aaKnown RBP16.3■□□□□ 0.2
UBE2F-SCLY-202ENST00000449891 DCTPP1Q9H773 170 aa16.3■□□□□ 0.2
UBE2F-SCLY-202ENST00000449891 GOLGA6L22H0YM25 854 aa16.29■□□□□ 0.2
UBE2F-SCLY-202ENST00000449891 CALD1Q05682 793 aaKnown RBP16.29■□□□□ 0.2
UBE2F-SCLY-202ENST00000449891 MPNDQ8N594 471 aa16.29■□□□□ 0.2
UBE2F-SCLY-202ENST00000449891 ARHGAP45Q92619 1136 aa16.29■□□□□ 0.2
UBE2F-SCLY-202ENST00000449891 USP26Q9BXU7 913 aa16.29■□□□□ 0.2
UBE2F-SCLY-202ENST00000449891 NPHP4O75161 1426 aaPredicted RBP16.29■□□□□ 0.2
UBE2F-SCLY-202ENST00000449891 SLIT1O75093 1534 aa16.29■□□□□ 0.2
UBE2F-SCLY-202ENST00000449891 CIZ1Q9ULV3 898 aaPredicted RBP16.29■□□□□ 0.2
UBE2F-SCLY-202ENST00000449891 ARHGAP23Q9P227 1491 aa16.29■□□□□ 0.2
UBE2F-SCLY-202ENST00000449891 CEP85Q6P2H3 762 aa16.28■□□□□ 0.2
UBE2F-SCLY-202ENST00000449891 EIF4A2Q14240 407 aaKnown RBP16.28■□□□□ 0.2
UBE2F-SCLY-202ENST00000449891 MSH6P52701 1360 aa16.27■□□□□ 0.19
UBE2F-SCLY-202ENST00000449891 NSFL1CQ9UNZ2 370 aaKnown RBP16.26■□□□□ 0.19
UBE2F-SCLY-202ENST00000449891 MED14O60244 1454 aa16.26■□□□□ 0.19
UBE2F-SCLY-202ENST00000449891 RIMS2Q9UQ26 1411 aa16.26■□□□□ 0.19
UBE2F-SCLY-202ENST00000449891 RNF214Q8ND24 703 aa16.26■□□□□ 0.19
UBE2F-SCLY-202ENST00000449891 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.26■□□□□ 0.19
UBE2F-SCLY-202ENST00000449891 ARID3AQ99856 593 aa16.26■□□□□ 0.19
UBE2F-SCLY-202ENST00000449891 CHMP4BQ9H444 224 aaKnown RBP16.26■□□□□ 0.19
UBE2F-SCLY-202ENST00000449891 ZNF335Q9H4Z2 1342 aaPredicted RBP16.26■□□□□ 0.19
UBE2F-SCLY-202ENST00000449891 NUTM2GQ5VZR2 741 aa16.25■□□□□ 0.19
UBE2F-SCLY-202ENST00000449891 RILPL2Q969X0 211 aa16.25■□□□□ 0.19
UBE2F-SCLY-202ENST00000449891 ZNF428Q96B54 188 aa16.25■□□□□ 0.19
UBE2F-SCLY-202ENST00000449891 PTCH1Q13635 1447 aa16.25■□□□□ 0.19
UBE2F-SCLY-202ENST00000449891 BRPF1P55201 1214 aaPredicted RBP16.25■□□□□ 0.19
UBE2F-SCLY-202ENST00000449891 INTS3Q68E01 1043 aaKnown RBP16.25■□□□□ 0.19
UBE2F-SCLY-202ENST00000449891 ANKRD44Q8N8A2 993 aa16.25■□□□□ 0.19
UBE2F-SCLY-202ENST00000449891 LARP6Q9BRS8 491 aaKnown RBP16.25■□□□□ 0.19
UBE2F-SCLY-202ENST00000449891 METP08581 1390 aa16.25■□□□□ 0.19
UBE2F-SCLY-202ENST00000449891 NEK4P51957 841 aa16.25■□□□□ 0.19
UBE2F-SCLY-202ENST00000449891 SKOR2Q2VWA4 1001 aaPredicted RBP16.25■□□□□ 0.19
UBE2F-SCLY-202ENST00000449891 TMEM131LA2VDJ0 1609 aa16.25■□□□□ 0.19
UBE2F-SCLY-202ENST00000449891 ALKQ9UM73 1620 aa16.24■□□□□ 0.19
UBE2F-SCLY-202ENST00000449891 MAP4K4O95819 1239 aaPredicted RBP16.24■□□□□ 0.19
UBE2F-SCLY-202ENST00000449891 RABEP1Q15276 862 aa16.24■□□□□ 0.19
UBE2F-SCLY-202ENST00000449891 CCDC61Q9Y6R9 512 aa16.24■□□□□ 0.19
UBE2F-SCLY-202ENST00000449891 PRIM1P49642 420 aaKnown RBP16.24■□□□□ 0.19
UBE2F-SCLY-202ENST00000449891 ZFYVE9O95405 1425 aa16.24■□□□□ 0.19
UBE2F-SCLY-202ENST00000449891 TRIM6-TRIM34B2RNG4 842 aa16.23■□□□□ 0.19
UBE2F-SCLY-202ENST00000449891 CERKQ8TCT0 537 aa16.23■□□□□ 0.19
UBE2F-SCLY-202ENST00000449891 GDPD2Q9HCC8 539 aa16.23■□□□□ 0.19
UBE2F-SCLY-202ENST00000449891 LMOD3Q0VAK6 560 aa16.23■□□□□ 0.19
UBE2F-SCLY-202ENST00000449891 ZSCAN23Q3MJ62 389 aa16.23■□□□□ 0.19
UBE2F-SCLY-202ENST00000449891 RBSNQ9H1K0 784 aa16.23■□□□□ 0.19
UBE2F-SCLY-202ENST00000449891 HSP90AA2PQ14568 343 aaPredicted RBP16.22■□□□□ 0.19
UBE2F-SCLY-202ENST00000449891 LMBRD1Q9NUN5 540 aa16.22■□□□□ 0.19
UBE2F-SCLY-202ENST00000449891 PRR36Q9H6K5 1346 aa16.22■□□□□ 0.19
UBE2F-SCLY-202ENST00000449891 ANP32BQ92688 251 aaKnown RBP16.22■□□□□ 0.19
UBE2F-SCLY-202ENST00000449891 UPF3BQ9BZI7 483 aaKnown RBP16.22■□□□□ 0.19
UBE2F-SCLY-202ENST00000449891 ZDHHC9Q9Y397 364 aa16.22■□□□□ 0.19
UBE2F-SCLY-202ENST00000449891 KLHL40Q2TBA0 621 aa16.22■□□□□ 0.19
UBE2F-SCLY-202ENST00000449891 LTV1Q96GA3 475 aaPredicted RBP16.22■□□□□ 0.19
UBE2F-SCLY-202ENST00000449891 CPS1P31327 1500 aa16.21■□□□□ 0.19
UBE2F-SCLY-202ENST00000449891 SYCE3A1L190 88 aa16.21■□□□□ 0.19
UBE2F-SCLY-202ENST00000449891 GPT2Q8TD30 523 aa16.21■□□□□ 0.19
UBE2F-SCLY-202ENST00000449891 SLC26A8Q96RN1 970 aa16.21■□□□□ 0.19
UBE2F-SCLY-202ENST00000449891 TSPYL4Q9UJ04 414 aa16.21■□□□□ 0.19
UBE2F-SCLY-202ENST00000449891 PALD1Q9ULE6 856 aa16.21■□□□□ 0.18
UBE2F-SCLY-202ENST00000449891 PIK3R4Q99570 1358 aa16.2■□□□□ 0.18
UBE2F-SCLY-202ENST00000449891 KNDC1Q76NI1 1749 aa16.2■□□□□ 0.18
UBE2F-SCLY-202ENST00000449891 ST18O60284 1047 aa16.2■□□□□ 0.18
UBE2F-SCLY-202ENST00000449891 CASC1Q6TDU7 716 aa16.2■□□□□ 0.18
UBE2F-SCLY-202ENST00000449891 RTL1A6NKG5 1358 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms