RNA–Protein interactions for RNA: ENST00000449234.1

RFX3-208, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-208ENST00000449234 ANKRD45Q5TZF3 282 aa14.33□□□□□ -0.12
RFX3-208ENST00000449234 TSPYL6Q8N831 410 aa14.33□□□□□ -0.12
RFX3-208ENST00000449234 C8orf58Q8NAV2 365 aa14.33□□□□□ -0.12
RFX3-208ENST00000449234 EID1Q9Y6B2 187 aa14.33□□□□□ -0.12
RFX3-208ENST00000449234 TOPAZ1Q8N9V7 1692 aa14.33□□□□□ -0.12
RFX3-208ENST00000449234 USP6P35125 1406 aa14.32□□□□□ -0.12
RFX3-208ENST00000449234 BABAM1Q9NWV8 329 aa14.32□□□□□ -0.12
RFX3-208ENST00000449234 ISY1Q9ULR0 285 aaKnown RBP14.32□□□□□ -0.12
RFX3-208ENST00000449234 ACEP12821 1306 aa14.32□□□□□ -0.12
RFX3-208ENST00000449234 ARHGEF10O15013 1369 aa14.32□□□□□ -0.12
RFX3-208ENST00000449234 ROBO2Q9HCK4 1378 aa14.32□□□□□ -0.12
RFX3-208ENST00000449234 FBLN1P23142 703 aa14.31□□□□□ -0.12
RFX3-208ENST00000449234 MCM4P33991 863 aa14.31□□□□□ -0.12
RFX3-208ENST00000449234 ANKRD44Q8N8A2 993 aa14.31□□□□□ -0.12
RFX3-208ENST00000449234 IL27Q8NEV9 243 aa14.31□□□□□ -0.12
RFX3-208ENST00000449234 LNPKQ9C0E8 428 aa14.31□□□□□ -0.12
RFX3-208ENST00000449234 ZRANB1Q9UGI0 708 aa14.31□□□□□ -0.12
RFX3-208ENST00000449234 NCOA3Q9Y6Q9 1424 aa14.31□□□□□ -0.12
RFX3-208ENST00000449234 DLG5Q8TDM6 1919 aa14.31□□□□□ -0.12
RFX3-208ENST00000449234 RRS1Q15050 365 aaKnown RBP14.3□□□□□ -0.12
RFX3-208ENST00000449234 PTPRUQ92729 1446 aa14.3□□□□□ -0.12
RFX3-208ENST00000449234 ARHGAP23Q9P227 1491 aa14.3□□□□□ -0.12
RFX3-208ENST00000449234 SLIT1O75093 1534 aa14.3□□□□□ -0.12
RFX3-208ENST00000449234 NALCNQ8IZF0 1738 aa14.29□□□□□ -0.12
RFX3-208ENST00000449234 CDC45O75419 566 aa14.29□□□□□ -0.12
RFX3-208ENST00000449234 SULT6B1Q6IMI4 303 aa14.29□□□□□ -0.12
RFX3-208ENST00000449234 SIRT2Q8IXJ6 389 aa14.29□□□□□ -0.12
RFX3-208ENST00000449234 THUMPD2Q9BTF0 503 aaKnown RBP14.29□□□□□ -0.12
RFX3-208ENST00000449234 SLKQ9H2G2 1235 aaPredicted RBP14.29□□□□□ -0.12
RFX3-208ENST00000449234 DIP2AQ14689 1571 aa14.29□□□□□ -0.12
RFX3-208ENST00000449234 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.29□□□□□ -0.12
RFX3-208ENST00000449234 KIF13AQ9H1H9 1805 aa14.29□□□□□ -0.12
RFX3-208ENST00000449234 SBNO1A3KN83 1393 aa14.28□□□□□ -0.12
RFX3-208ENST00000449234 DDX11L8A8MPP1 907 aa14.28□□□□□ -0.12
RFX3-208ENST00000449234 PITPNM1O00562 1244 aa14.28□□□□□ -0.12
RFX3-208ENST00000449234 RGPD1P0DJD0 1748 aa14.28□□□□□ -0.12
RFX3-208ENST00000449234 DDIT3P35638 169 aa14.28□□□□□ -0.12
RFX3-208ENST00000449234 CHMP4AQ9BY43 222 aa14.28□□□□□ -0.12
RFX3-208ENST00000449234 HMMRO75330 724 aa14.27□□□□□ -0.13
RFX3-208ENST00000449234 SKOR2Q2VWA4 1001 aaPredicted RBP14.27□□□□□ -0.13
RFX3-208ENST00000449234 GAS2L2Q8NHY3 880 aa14.27□□□□□ -0.13
RFX3-208ENST00000449234 CRB1P82279 1406 aa14.26□□□□□ -0.13
RFX3-208ENST00000449234 ANKARQ7Z5J8 1434 aa14.26□□□□□ -0.13
RFX3-208ENST00000449234 RTL1A6NKG5 1358 aa14.26□□□□□ -0.13
RFX3-208ENST00000449234 KDRP35968 1356 aa14.26□□□□□ -0.13
RFX3-208ENST00000449234 CCT4P50991 539 aaKnown RBP14.26□□□□□ -0.13
RFX3-208ENST00000449234 THEMISQ8N1K5 641 aaPredicted RBP14.26□□□□□ -0.13
RFX3-208ENST00000449234 FLT4P35916 1363 aa14.25□□□□□ -0.13
RFX3-208ENST00000449234 LTKP29376 864 aa14.25□□□□□ -0.13
RFX3-208ENST00000449234 PLEKHM2Q8IWE5 1019 aa14.25□□□□□ -0.13
RFX3-208ENST00000449234 NCKAP5LQ9HCH0 1330 aa14.24□□□□□ -0.13
RFX3-208ENST00000449234 ELL2O00472 640 aaPredicted RBP14.24□□□□□ -0.13
RFX3-208ENST00000449234 CLEC17AQ6ZS10 378 aa14.24□□□□□ -0.13
RFX3-208ENST00000449234 TBC1D9Q6ZT07 1266 aa14.24□□□□□ -0.13
RFX3-208ENST00000449234 RTF1Q92541 710 aaKnown RBP14.24□□□□□ -0.13
RFX3-208ENST00000449234 IGSF1Q8N6C5 1336 aa14.23□□□□□ -0.13
RFX3-208ENST00000449234 FAM83GA6ND36 823 aa14.23□□□□□ -0.13
RFX3-208ENST00000449234 RABEP1Q15276 862 aa14.23□□□□□ -0.13
RFX3-208ENST00000449234 TTC22Q5TAA0 569 aa14.23□□□□□ -0.13
RFX3-208ENST00000449234 CASC1Q6TDU7 716 aa14.23□□□□□ -0.13
RFX3-208ENST00000449234 SPDYE1Q8NFV5 336 aaPredicted RBP14.23□□□□□ -0.13
RFX3-208ENST00000449234 GBP4Q96PP9 640 aa14.23□□□□□ -0.13
RFX3-208ENST00000449234 OSBPL3Q9H4L5 887 aa14.23□□□□□ -0.13
RFX3-208ENST00000449234 AMOTL2Q9Y2J4 779 aa14.23□□□□□ -0.13
RFX3-208ENST00000449234 RIMS1Q86UR5 1692 aaKnown RBP14.23□□□□□ -0.13
RFX3-208ENST00000449234 HSP90AB1P08238 724 aaKnown RBP14.22□□□□□ -0.13
RFX3-208ENST00000449234 CEP85Q6P2H3 762 aa14.22□□□□□ -0.13
RFX3-208ENST00000449234 FAM43AQ8N2R8 423 aa14.22□□□□□ -0.13
RFX3-208ENST00000449234 KIF2CQ99661 725 aa14.22□□□□□ -0.13
RFX3-208ENST00000449234 RGS12O14924 1447 aa14.22□□□□□ -0.13
RFX3-208ENST00000449234 FSD2A1L4K1 749 aa14.21□□□□□ -0.13
RFX3-208ENST00000449234 K7ELQ4 463 aaPredicted RBP14.21□□□□□ -0.13
RFX3-208ENST00000449234 DCTN1Q14203 1278 aa14.21□□□□□ -0.13
RFX3-208ENST00000449234 HSP90AB2PQ58FF8 381 aa14.21□□□□□ -0.13
RFX3-208ENST00000449234 AEBP1Q8IUX7 1158 aa14.21□□□□□ -0.13
RFX3-208ENST00000449234 USP54Q70EL1 1684 aa14.2□□□□□ -0.14
RFX3-208ENST00000449234 MAP3K19Q56UN5 1328 aa14.2□□□□□ -0.14
RFX3-208ENST00000449234 EPB41L2O43491 1005 aaKnown RBP14.2□□□□□ -0.14
RFX3-208ENST00000449234 TRAK2O60296 914 aa14.2□□□□□ -0.14
RFX3-208ENST00000449234 RAB3GAP1Q15042 981 aa14.2□□□□□ -0.14
RFX3-208ENST00000449234 ATP10DQ9P241 1426 aa14.2□□□□□ -0.14
RFX3-208ENST00000449234 PEAK1Q9H792 1746 aa14.19□□□□□ -0.14
RFX3-208ENST00000449234 GOLGA6L3A6NEY3 463 aa14.19□□□□□ -0.14
RFX3-208ENST00000449234 GNAI3P08754 354 aa14.19□□□□□ -0.14
RFX3-208ENST00000449234 CCDC30Q5VVM6 783 aa14.19□□□□□ -0.14
RFX3-208ENST00000449234 NGDNQ8NEJ9 315 aaKnown RBP14.19□□□□□ -0.14
RFX3-208ENST00000449234 C1orf115Q9H7X2 142 aa14.19□□□□□ -0.14
RFX3-208ENST00000449234 CWC22Q9HCG8 908 aaKnown RBP14.19□□□□□ -0.14
RFX3-208ENST00000449234 SPDYE4A6NLX3 237 aa14.18□□□□□ -0.14
RFX3-208ENST00000449234 REC8O95072 547 aa14.18□□□□□ -0.14
RFX3-208ENST00000449234 AMPHP49418 695 aa14.18□□□□□ -0.14
RFX3-208ENST00000449234 MTHFSDQ2M296 383 aaKnown RBP14.18□□□□□ -0.14
RFX3-208ENST00000449234 STK31Q9BXU1 1019 aa14.18□□□□□ -0.14
RFX3-208ENST00000449234 USP26Q9BXU7 913 aa14.18□□□□□ -0.14
RFX3-208ENST00000449234 TSPYL4Q9UJ04 414 aa14.18□□□□□ -0.14
RFX3-208ENST00000449234 MRE11P49959 708 aa14.17□□□□□ -0.14
RFX3-208ENST00000449234 NUCB2P80303 420 aa14.17□□□□□ -0.14
RFX3-208ENST00000449234 MCM10Q7L590 875 aa14.17□□□□□ -0.14
RFX3-208ENST00000449234 EYA1Q99502 592 aa14.17□□□□□ -0.14
RFX3-208ENST00000449234 GNAT3A8MTJ3 354 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms