RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 SMC2O95347 1197 aa12.08□□□□□ -0.48
SCN10A-201ENST00000449082 TAF7Q15545 349 aaPredicted RBP12.08□□□□□ -0.48
SCN10A-201ENST00000449082 TRIM5Q9C035 493 aa12.08□□□□□ -0.48
SCN10A-201ENST00000449082 DMRT2Q9Y5R5 561 aa12.08□□□□□ -0.48
SCN10A-201ENST00000449082 NAIPQ13075 1403 aa12.08□□□□□ -0.48
SCN10A-201ENST00000449082 AKNAQ7Z591 1439 aa12.08□□□□□ -0.48
SCN10A-201ENST00000449082 TEX35Q5T0J7 233 aa12.08□□□□□ -0.48
SCN10A-201ENST00000449082 STIM1Q13586 685 aa12.08□□□□□ -0.48
SCN10A-201ENST00000449082 PCF11O94913 1555 aaKnown RBP12.08□□□□□ -0.48
SCN10A-201ENST00000449082 FIBPO43427 364 aa12.08□□□□□ -0.48
SCN10A-201ENST00000449082 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.08□□□□□ -0.48
SCN10A-201ENST00000449082 PTPN23Q9H3S7 1636 aa12.07□□□□□ -0.48
SCN10A-201ENST00000449082 CAGE1Q8TC20 777 aa12.07□□□□□ -0.48
SCN10A-201ENST00000449082 WASLO00401 505 aaPredicted RBP12.07□□□□□ -0.48
SCN10A-201ENST00000449082 DACH1Q9UI36 760 aa12.07□□□□□ -0.48
SCN10A-201ENST00000449082 PRPF40AO75400 957 aaKnown RBP12.07□□□□□ -0.48
SCN10A-201ENST00000449082 IDH1O75874 414 aaKnown RBP12.07□□□□□ -0.48
SCN10A-201ENST00000449082 NASPP49321 788 aaPredicted RBP12.07□□□□□ -0.48
SCN10A-201ENST00000449082 CCDC85AQ96PX6 553 aaPredicted RBP12.07□□□□□ -0.48
SCN10A-201ENST00000449082 TSPY26PQ9H489 355 aa12.07□□□□□ -0.48
SCN10A-201ENST00000449082 DENND4BO75064 1496 aaPredicted RBP12.07□□□□□ -0.48
SCN10A-201ENST00000449082 ADAMTS2O95450 1211 aa12.07□□□□□ -0.48
SCN10A-201ENST00000449082 HSP90AB3PQ58FF7 597 aa12.07□□□□□ -0.48
SCN10A-201ENST00000449082 CAVIN4Q5BKX8 364 aa12.07□□□□□ -0.48
SCN10A-201ENST00000449082 MCM10Q7L590 875 aa12.07□□□□□ -0.48
SCN10A-201ENST00000449082 AIDAQ96BJ3 306 aa12.07□□□□□ -0.48
SCN10A-201ENST00000449082 ZSCAN31Q96LW9 406 aaPredicted RBP12.07□□□□□ -0.48
SCN10A-201ENST00000449082 FAM13BQ9NYF5 915 aa12.07□□□□□ -0.48
SCN10A-201ENST00000449082 MYO6Q9UM54 1294 aa12.07□□□□□ -0.48
SCN10A-201ENST00000449082 HSP90AA2PQ14568 343 aaPredicted RBP12.07□□□□□ -0.48
SCN10A-201ENST00000449082 CAVIN1Q6NZI2 390 aaKnown RBP12.07□□□□□ -0.48
SCN10A-201ENST00000449082 ZNF287Q9HBT7 754 aa12.07□□□□□ -0.48
SCN10A-201ENST00000449082 IL1RAPL2Q9NP60 686 aa12.07□□□□□ -0.48
SCN10A-201ENST00000449082 WDR33Q9C0J8 1336 aaKnown RBP12.06□□□□□ -0.48
SCN10A-201ENST00000449082 MRE11P49959 708 aa12.06□□□□□ -0.48
SCN10A-201ENST00000449082 NFKBIBQ15653 356 aa12.06□□□□□ -0.48
SCN10A-201ENST00000449082 MIS18AQ9NYP9 233 aa12.06□□□□□ -0.48
SCN10A-201ENST00000449082 CWC27Q6UX04 472 aaKnown RBP12.06□□□□□ -0.48
SCN10A-201ENST00000449082 PDRG1Q9NUG6 133 aa12.06□□□□□ -0.48
SCN10A-201ENST00000449082 RAB11FIP3O75154 756 aa12.06□□□□□ -0.48
SCN10A-201ENST00000449082 IFIT1P09914 478 aaKnown RBP12.06□□□□□ -0.48
SCN10A-201ENST00000449082 FMNL2Q96PY5 1086 aa12.06□□□□□ -0.48
SCN10A-201ENST00000449082 IMMTQ16891 758 aaKnown RBP12.06□□□□□ -0.48
SCN10A-201ENST00000449082 RNF214Q8ND24 703 aa12.06□□□□□ -0.48
SCN10A-201ENST00000449082 CCP110O43303 1012 aa12.06□□□□□ -0.48
SCN10A-201ENST00000449082 FOXO3O43524 673 aa12.06□□□□□ -0.48
SCN10A-201ENST00000449082 NME9Q86XW9 330 aa12.06□□□□□ -0.48
SCN10A-201ENST00000449082 WASF1Q92558 559 aa12.06□□□□□ -0.48
SCN10A-201ENST00000449082 KIF1BPQ96EK5 621 aa12.06□□□□□ -0.48
SCN10A-201ENST00000449082 ABCC11Q96J66 1382 aa12.05□□□□□ -0.48
SCN10A-201ENST00000449082 TRAK2O60296 914 aa12.05□□□□□ -0.48
SCN10A-201ENST00000449082 LARP1BQ659C4 914 aaKnown RBP12.05□□□□□ -0.48
SCN10A-201ENST00000449082 ZHX3Q9H4I2 956 aa12.05□□□□□ -0.48
SCN10A-201ENST00000449082 ABCF2Q9UG63 623 aa12.05□□□□□ -0.48
SCN10A-201ENST00000449082 ME1P48163 572 aa12.05□□□□□ -0.48
SCN10A-201ENST00000449082 BRPF1P55201 1214 aaPredicted RBP12.05□□□□□ -0.48
SCN10A-201ENST00000449082 MPHOSPH10O00566 681 aaKnown RBP12.05□□□□□ -0.48
SCN10A-201ENST00000449082 KRT85P78386 507 aa12.05□□□□□ -0.48
SCN10A-201ENST00000449082 SLFN5Q08AF3 891 aa12.05□□□□□ -0.48
SCN10A-201ENST00000449082 FBXO31Q5XUX0 539 aaPredicted RBP12.05□□□□□ -0.48
SCN10A-201ENST00000449082 MYD88Q99836 296 aa12.05□□□□□ -0.48
SCN10A-201ENST00000449082 SPINK5Q9NQ38 1064 aaPredicted RBP12.05□□□□□ -0.48
SCN10A-201ENST00000449082 ABCC5O15440 1437 aa12.05□□□□□ -0.48
SCN10A-201ENST00000449082 NGLY1Q96IV0 654 aa12.05□□□□□ -0.48
SCN10A-201ENST00000449082 K7ELQ4 463 aaPredicted RBP12.05□□□□□ -0.48
SCN10A-201ENST00000449082 JAKMIP1Q96N16 626 aaKnown RBP12.05□□□□□ -0.48
SCN10A-201ENST00000449082 ZNHIT6Q9NWK9 470 aaKnown RBP12.05□□□□□ -0.48
SCN10A-201ENST00000449082 BMP2KQ9NSY1 1161 aaPredicted RBP12.04□□□□□ -0.48
SCN10A-201ENST00000449082 MPRIPQ6WCQ1 1025 aa12.04□□□□□ -0.48
SCN10A-201ENST00000449082 USHBP1Q8N6Y0 703 aa12.04□□□□□ -0.48
SCN10A-201ENST00000449082 EXOC5O00471 708 aa12.04□□□□□ -0.48
SCN10A-201ENST00000449082 IDI1Q13907 227 aa12.04□□□□□ -0.48
SCN10A-201ENST00000449082 TMEM57Q8N5G2 664 aa12.04□□□□□ -0.48
SCN10A-201ENST00000449082 ZNF76P36508 570 aa12.04□□□□□ -0.48
SCN10A-201ENST00000449082 TTLL5Q6EMB2 1281 aa12.04□□□□□ -0.48
SCN10A-201ENST00000449082 CEBPAP49715 358 aaPredicted RBP12.04□□□□□ -0.48
SCN10A-201ENST00000449082 ALDH1L2Q3SY69 923 aa12.04□□□□□ -0.48
SCN10A-201ENST00000449082 KRT28Q7Z3Y7 464 aa12.04□□□□□ -0.48
SCN10A-201ENST00000449082 DHX8Q14562 1220 aaKnown RBP12.03□□□□□ -0.48
SCN10A-201ENST00000449082 FAM43AQ8N2R8 423 aa12.03□□□□□ -0.48
SCN10A-201ENST00000449082 PAF1Q8N7H5 531 aa12.03□□□□□ -0.48
SCN10A-201ENST00000449082 PDCL3Q9H2J4 239 aa12.03□□□□□ -0.48
SCN10A-201ENST00000449082 USP5P45974 858 aa12.03□□□□□ -0.48
SCN10A-201ENST00000449082 HSP90B2PQ58FF3 399 aa12.03□□□□□ -0.48
SCN10A-201ENST00000449082 ANKIB1Q9P2G1 1089 aa12.03□□□□□ -0.48
SCN10A-201ENST00000449082 FANCAO15360 1455 aa12.03□□□□□ -0.48
SCN10A-201ENST00000449082 NUTM1Q86Y26 1132 aa12.03□□□□□ -0.48
SCN10A-201ENST00000449082 LUC7LQ9NQ29 371 aaKnown RBP12.03□□□□□ -0.48
SCN10A-201ENST00000449082 GLRX3O76003 335 aaKnown RBP12.02□□□□□ -0.48
SCN10A-201ENST00000449082 PDIA4P13667 645 aaKnown RBP12.02□□□□□ -0.48
SCN10A-201ENST00000449082 IFIT5Q13325 482 aaKnown RBP12.02□□□□□ -0.48
SCN10A-201ENST00000449082 THUMPD2Q9BTF0 503 aaKnown RBP12.02□□□□□ -0.48
SCN10A-201ENST00000449082 HYPKQ9NX55 129 aa12.02□□□□□ -0.48
SCN10A-201ENST00000449082 SERPINC1P01008 464 aa12.02□□□□□ -0.48
SCN10A-201ENST00000449082 TNMDQ9H2S6 317 aa12.02□□□□□ -0.48
SCN10A-201ENST00000449082 POLR3DP05423 398 aaPredicted RBP12.02□□□□□ -0.49
SCN10A-201ENST00000449082 CCDC192P0DO97 292 aa12.02□□□□□ -0.49
SCN10A-201ENST00000449082 DCTN1Q14203 1278 aa12.02□□□□□ -0.49
SCN10A-201ENST00000449082 FBXO3Q9UK99 471 aa12.02□□□□□ -0.49
SCN10A-201ENST00000449082 CFAP45Q9UL16 551 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms