RNA–Protein interactions for RNA: ENST00000448526.6

CDKN1A-204, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDKN1A, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-204ENST00000448526 TBC1D32Q96NH3 1257 aa21.55■■□□□ 1.04
CDKN1A-204ENST00000448526 RGS12O14924 1447 aa21.54■■□□□ 1.04
CDKN1A-204ENST00000448526 NWD1Q149M9 1564 aa21.54■■□□□ 1.04
CDKN1A-204ENST00000448526 DEKP35659 375 aaKnown RBP21.54■■□□□ 1.04
CDKN1A-204ENST00000448526 CHMP4BQ9H444 224 aaKnown RBP21.54■■□□□ 1.04
CDKN1A-204ENST00000448526 ADAMTSL3P82987 1691 aa21.54■■□□□ 1.04
CDKN1A-204ENST00000448526 CHD1LQ86WJ1 897 aa21.53■■□□□ 1.04
CDKN1A-204ENST00000448526 PHF8Q9UPP1 1060 aa21.53■■□□□ 1.04
CDKN1A-204ENST00000448526 RTF1Q92541 710 aaKnown RBP21.51■■□□□ 1.03
CDKN1A-204ENST00000448526 INTS3Q68E01 1043 aaKnown RBP21.5■■□□□ 1.03
CDKN1A-204ENST00000448526 UPF2Q9HAU5 1272 aaKnown RBP21.5■■□□□ 1.03
CDKN1A-204ENST00000448526 KIF24Q5T7B8 1368 aa21.5■■□□□ 1.03
CDKN1A-204ENST00000448526 C14orf37Q86TY3 774 aa21.5■■□□□ 1.03
CDKN1A-204ENST00000448526 GAS2L2Q8NHY3 880 aa21.5■■□□□ 1.03
CDKN1A-204ENST00000448526 GCC1Q96CN9 775 aa21.5■■□□□ 1.03
CDKN1A-204ENST00000448526 SETD1BQ9UPS6 1966 aaKnown RBP21.5■■□□□ 1.03
CDKN1A-204ENST00000448526 ANKRD45Q5TZF3 282 aa21.49■■□□□ 1.03
CDKN1A-204ENST00000448526 LTV1Q96GA3 475 aaPredicted RBP21.49■■□□□ 1.03
CDKN1A-204ENST00000448526 TSPYL4Q9UJ04 414 aa21.49■■□□□ 1.03
CDKN1A-204ENST00000448526 HAP1P54257 671 aaPredicted RBP21.49■■□□□ 1.03
CDKN1A-204ENST00000448526 LTN1O94822 1766 aa21.48■■□□□ 1.03
CDKN1A-204ENST00000448526 USP35Q9P2H5 1018 aa21.47■■□□□ 1.03
CDKN1A-204ENST00000448526 LRRC37A3O60309 1634 aa21.47■■□□□ 1.03
CDKN1A-204ENST00000448526 ADGRL3Q9HAR2 1447 aa21.47■■□□□ 1.03
CDKN1A-204ENST00000448526 SLC4A2P04920 1241 aa21.46■■□□□ 1.03
CDKN1A-204ENST00000448526 MFAP1P55081 439 aaKnown RBP21.46■■□□□ 1.03
CDKN1A-204ENST00000448526 NFKBIBQ15653 356 aa21.46■■□□□ 1.03
CDKN1A-204ENST00000448526 ESCO1Q5FWF5 840 aa21.44■■□□□ 1.02
CDKN1A-204ENST00000448526 G2E3Q7L622 706 aa21.44■■□□□ 1.02
CDKN1A-204ENST00000448526 USHBP1Q8N6Y0 703 aa21.44■■□□□ 1.02
CDKN1A-204ENST00000448526 PTPRCP08575 1304 aa21.44■■□□□ 1.02
CDKN1A-204ENST00000448526 NFAT5O94916 1531 aa21.44■■□□□ 1.02
CDKN1A-204ENST00000448526 HTATSF1O43719 755 aaKnown RBP21.44■■□□□ 1.02
CDKN1A-204ENST00000448526 MSH6P52701 1360 aa21.44■■□□□ 1.02
CDKN1A-204ENST00000448526 NPHP4O75161 1426 aaPredicted RBP21.44■■□□□ 1.02
CDKN1A-204ENST00000448526 GNAT3A8MTJ3 354 aa21.43■■□□□ 1.02
CDKN1A-204ENST00000448526 ATP10DQ9P241 1426 aa21.43■■□□□ 1.02
CDKN1A-204ENST00000448526 IL17REQ8NFR9 667 aa21.43■■□□□ 1.02
CDKN1A-204ENST00000448526 C22orf23Q9BZE7 217 aa21.43■■□□□ 1.02
CDKN1A-204ENST00000448526 RTL1A6NKG5 1358 aa21.43■■□□□ 1.02
CDKN1A-204ENST00000448526 BECN1Q14457 450 aa21.42■■□□□ 1.02
CDKN1A-204ENST00000448526 PSME1Q06323 249 aa21.41■■□□□ 1.02
CDKN1A-204ENST00000448526 IP6K1Q92551 441 aa21.41■■□□□ 1.02
CDKN1A-204ENST00000448526 MAP3K5Q99683 1374 aa21.4■■□□□ 1.02
CDKN1A-204ENST00000448526 BMP2KLQ5H9B9 411 aa21.4■■□□□ 1.02
CDKN1A-204ENST00000448526 ANKRD44Q8N8A2 993 aa21.4■■□□□ 1.02
CDKN1A-204ENST00000448526 MEIS3Q99687 375 aa21.4■■□□□ 1.02
CDKN1A-204ENST00000448526 TBC1D2Q9BYX2 928 aa21.4■■□□□ 1.02
CDKN1A-204ENST00000448526 DCTPP1Q9H773 170 aa21.4■■□□□ 1.02
CDKN1A-204ENST00000448526 ORAI2Q96SN7 254 aa21.39■■□□□ 1.01
CDKN1A-204ENST00000448526 F6X3S4 739 aa21.38■■□□□ 1.01
CDKN1A-204ENST00000448526 CEP85Q6P2H3 762 aa21.38■■□□□ 1.01
CDKN1A-204ENST00000448526 NBPF6Q5VWK0 638 aa21.38■■□□□ 1.01
CDKN1A-204ENST00000448526 NBPF4Q96M43 638 aa21.38■■□□□ 1.01
CDKN1A-204ENST00000448526 RGPD2P0DJD1 1756 aa21.37■■□□□ 1.01
CDKN1A-204ENST00000448526 FAM208AQ9UK61 1670 aaKnown RBP21.36■■□□□ 1.01
CDKN1A-204ENST00000448526 XPCQ01831 940 aaPredicted RBP21.36■■□□□ 1.01
CDKN1A-204ENST00000448526 ZBTB7CA1YPR0 619 aa21.35■■□□□ 1.01
CDKN1A-204ENST00000448526 RPAP2Q8IXW5 612 aaPredicted RBP21.35■■□□□ 1.01
CDKN1A-204ENST00000448526 SLC4A10Q6U841 1118 aa21.35■■□□□ 1.01
CDKN1A-204ENST00000448526 SLKQ9H2G2 1235 aaPredicted RBP21.35■■□□□ 1.01
CDKN1A-204ENST00000448526 FRAT2O75474 233 aaPredicted RBP21.34■■□□□ 1.01
CDKN1A-204ENST00000448526 TAF7Q15545 349 aaPredicted RBP21.34■■□□□ 1.01
CDKN1A-204ENST00000448526 NECTIN2Q92692 538 aa21.34■■□□□ 1.01
CDKN1A-204ENST00000448526 PLEKHM2Q8IWE5 1019 aa21.34■■□□□ 1.01
CDKN1A-204ENST00000448526 ANTXR1Q9H6X2 564 aa21.34■■□□□ 1.01
CDKN1A-204ENST00000448526 PHRF1Q9P1Y6 1649 aaKnown RBP21.33■■□□□ 1.01
CDKN1A-204ENST00000448526 C16orf71Q8IYS4 520 aaPredicted RBP21.33■■□□□ 1.01
CDKN1A-204ENST00000448526 KCNH5Q8NCM2 988 aa21.33■■□□□ 1.01
CDKN1A-204ENST00000448526 LRRC59Q96AG4 307 aaKnown RBP21.32■■□□□ 1
CDKN1A-204ENST00000448526 STK31Q9BXU1 1019 aa21.32■■□□□ 1
CDKN1A-204ENST00000448526 PLEKHG5O94827 1062 aa21.32■■□□□ 1
CDKN1A-204ENST00000448526 GSPT1P15170 499 aaKnown RBP21.32■■□□□ 1
CDKN1A-204ENST00000448526 FLIIQ13045 1269 aa21.31■■□□□ 1
CDKN1A-204ENST00000448526 CCDC30Q5VVM6 783 aa21.31■■□□□ 1
CDKN1A-204ENST00000448526 TBC1D9Q6ZT07 1266 aa21.31■■□□□ 1
CDKN1A-204ENST00000448526 RBM25P49756 843 aaKnown RBP21.31■■□□□ 1
CDKN1A-204ENST00000448526 CCT4P50991 539 aaKnown RBP21.31■■□□□ 1
CDKN1A-204ENST00000448526 BCL11AQ9H165 835 aa21.31■■□□□ 1
CDKN1A-204ENST00000448526 CEMIPQ8WUJ3 1361 aa21.3■■□□□ 1
CDKN1A-204ENST00000448526 GCP02774 474 aa21.3■■□□□ 1
CDKN1A-204ENST00000448526 OTUD7AQ8TE49 926 aaPredicted RBP21.3■■□□□ 1
CDKN1A-204ENST00000448526 LGR6Q9HBX8 967 aa21.3■■□□□ 1
CDKN1A-204ENST00000448526 BABAM1Q9NWV8 329 aa21.3■■□□□ 1
CDKN1A-204ENST00000448526 CACNA1FO60840 1977 aa21.3■■□□□ 1
CDKN1A-204ENST00000448526 SLIT3O75094 1523 aa21.29■■□□□ 1
CDKN1A-204ENST00000448526 SMARCA5O60264 1052 aaPredicted RBP21.29■■□□□ 1
CDKN1A-204ENST00000448526 ARHGEF25Q86VW2 580 aa21.29■■□□□ 1
CDKN1A-204ENST00000448526 TRPM3Q9HCF6 1732 aaPredicted RBP21.28■■□□□ 1
CDKN1A-204ENST00000448526 PROSER2Q86WR7 435 aaPredicted RBP21.28■■□□□ 1
CDKN1A-204ENST00000448526 MED1Q15648 1581 aaPredicted RBP21.28■■□□□ 1
CDKN1A-204ENST00000448526 FKBP5Q13451 457 aaPredicted RBP21.28■■□□□ 1
CDKN1A-204ENST00000448526 APBB1O00213 710 aa21.27■■□□□ 1
CDKN1A-204ENST00000448526 SPRYD3Q8NCJ5 442 aa21.27■■□□□ 1
CDKN1A-204ENST00000448526 LMOD2Q6P5Q4 547 aa21.26■□□□□ 0.99
CDKN1A-204ENST00000448526 SOS1Q07889 1333 aaPredicted RBP21.26■□□□□ 0.99
CDKN1A-204ENST00000448526 TTC22Q5TAA0 569 aa21.26■□□□□ 0.99
CDKN1A-204ENST00000448526 LMO7Q8WWI1 1683 aa21.25■□□□□ 0.99
CDKN1A-204ENST00000448526 KIF2CQ99661 725 aa21.25■□□□□ 0.99
CDKN1A-204ENST00000448526 CDC45O75419 566 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms