RNA–Protein interactions for RNA: ENST00000448246.1

SP4-204, Transcript of Sp4 transcription factor, humanhuman

TSL 5

Gene SP4, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP4-204ENST00000448246 TEX13AQ9BXU3 409 aaPredicted RBP12.66□□□□□ -0.38
SP4-204ENST00000448246 FLT4P35916 1363 aa12.66□□□□□ -0.38
SP4-204ENST00000448246 CFAP74Q9C0B2 1584 aa12.66□□□□□ -0.38
SP4-204ENST00000448246 TSPOAP1O95153 1857 aa12.66□□□□□ -0.38
SP4-204ENST00000448246 A0A1W2PP64 1363 aa12.66□□□□□ -0.38
SP4-204ENST00000448246 PDZRN3Q9UPQ7 1066 aa12.66□□□□□ -0.38
SP4-204ENST00000448246 ABCC1P33527 1531 aa12.66□□□□□ -0.38
SP4-204ENST00000448246 MARCH6O60337 910 aa12.66□□□□□ -0.38
SP4-204ENST00000448246 RARSP54136 660 aaKnown RBP12.66□□□□□ -0.38
SP4-204ENST00000448246 TMEM57Q8N5G2 664 aa12.66□□□□□ -0.38
SP4-204ENST00000448246 RASSF8Q8NHQ8 419 aa12.66□□□□□ -0.38
SP4-204ENST00000448246 CPLX1O14810 134 aa12.65□□□□□ -0.38
SP4-204ENST00000448246 ALDH1L2Q3SY69 923 aa12.65□□□□□ -0.38
SP4-204ENST00000448246 RALYLQ86SE5 291 aaKnown RBP12.65□□□□□ -0.38
SP4-204ENST00000448246 RPAP2Q8IXW5 612 aaPredicted RBP12.65□□□□□ -0.38
SP4-204ENST00000448246 MAP3K19Q56UN5 1328 aa12.65□□□□□ -0.38
SP4-204ENST00000448246 LRRCC1Q9C099 1032 aa12.65□□□□□ -0.38
SP4-204ENST00000448246 ZCCHC11Q5TAX3 1644 aaKnown RBP12.65□□□□□ -0.38
SP4-204ENST00000448246 EIF2AK4Q9P2K8 1649 aaKnown RBP12.65□□□□□ -0.38
SP4-204ENST00000448246 DDX11L8A8MPP1 907 aa12.65□□□□□ -0.39
SP4-204ENST00000448246 H3BQV1 296 aa12.65□□□□□ -0.39
SP4-204ENST00000448246 SF3A1Q15459 793 aaKnown RBP12.65□□□□□ -0.39
SP4-204ENST00000448246 IFFO2Q5TF58 517 aa12.65□□□□□ -0.39
SP4-204ENST00000448246 HYPKQ9NX55 129 aa12.65□□□□□ -0.39
SP4-204ENST00000448246 CHMP5Q9NZZ3 219 aa12.65□□□□□ -0.39
SP4-204ENST00000448246 TTC37Q6PGP7 1564 aa12.64□□□□□ -0.39
SP4-204ENST00000448246 DHX16O60231 1041 aaKnown RBP12.64□□□□□ -0.39
SP4-204ENST00000448246 CDC45O75419 566 aa12.64□□□□□ -0.39
SP4-204ENST00000448246 IL2RBP14784 551 aa12.64□□□□□ -0.39
SP4-204ENST00000448246 C8orf34Q49A92 452 aa12.64□□□□□ -0.39
SP4-204ENST00000448246 ASXL1Q8IXJ9 1541 aa12.64□□□□□ -0.39
SP4-204ENST00000448246 F6X3S4 739 aa12.64□□□□□ -0.39
SP4-204ENST00000448246 VPS53Q5VIR6 699 aa12.64□□□□□ -0.39
SP4-204ENST00000448246 MYD88Q99836 296 aa12.64□□□□□ -0.39
SP4-204ENST00000448246 ZBTB3Q9H5J0 574 aa12.64□□□□□ -0.39
SP4-204ENST00000448246 ERICH2A1L162 156 aa12.63□□□□□ -0.39
SP4-204ENST00000448246 NRDCO43847 1150 aa12.63□□□□□ -0.39
SP4-204ENST00000448246 MSNP26038 577 aaKnown RBP12.63□□□□□ -0.39
SP4-204ENST00000448246 HSP90AB3PQ58FF7 597 aa12.63□□□□□ -0.39
SP4-204ENST00000448246 FOXD4L5Q5VV16 416 aaPredicted RBP12.63□□□□□ -0.39
SP4-204ENST00000448246 FOXD4L4Q8WXT5 416 aaPredicted RBP12.63□□□□□ -0.39
SP4-204ENST00000448246 DNAAF4Q8WXU2 420 aa12.63□□□□□ -0.39
SP4-204ENST00000448246 CLSTN1O94985 981 aa12.63□□□□□ -0.39
SP4-204ENST00000448246 SNRPA1P09661 255 aaKnown RBP12.63□□□□□ -0.39
SP4-204ENST00000448246 BTG4Q9NY30 223 aa12.63□□□□□ -0.39
SP4-204ENST00000448246 SAMD9LQ8IVG5 1584 aa12.63□□□□□ -0.39
SP4-204ENST00000448246 IGHMBP2P38935 993 aaKnown RBP12.63□□□□□ -0.39
SP4-204ENST00000448246 TTC39AQ5SRH9 613 aa12.63□□□□□ -0.39
SP4-204ENST00000448246 IP6K1Q92551 441 aa12.63□□□□□ -0.39
SP4-204ENST00000448246 EYA1Q99502 592 aa12.63□□□□□ -0.39
SP4-204ENST00000448246 FLIIQ13045 1269 aa12.62□□□□□ -0.39
SP4-204ENST00000448246 CTDP1Q9Y5B0 961 aaPredicted RBP12.62□□□□□ -0.39
SP4-204ENST00000448246 NFXL1Q6ZNB6 911 aa12.62□□□□□ -0.39
SP4-204ENST00000448246 ACSBG1Q96GR2 724 aa12.62□□□□□ -0.39
SP4-204ENST00000448246 BCL11BQ9C0K0 894 aaPredicted RBP12.62□□□□□ -0.39
SP4-204ENST00000448246 IL1RAPL2Q9NP60 686 aa12.62□□□□□ -0.39
SP4-204ENST00000448246 MBIPQ9NS73 344 aa12.62□□□□□ -0.39
SP4-204ENST00000448246 TRMT112Q9UI30 125 aaKnown RBP12.62□□□□□ -0.39
SP4-204ENST00000448246 GOLGA6L6A8MZA4 724 aa12.62□□□□□ -0.39
SP4-204ENST00000448246 AKAP4Q5JQC9 854 aa12.62□□□□□ -0.39
SP4-204ENST00000448246 MRE11P49959 708 aa12.61□□□□□ -0.39
SP4-204ENST00000448246 SIRT1Q96EB6 747 aa12.61□□□□□ -0.39
SP4-204ENST00000448246 PARD3Q8TEW0 1356 aa12.61□□□□□ -0.39
SP4-204ENST00000448246 A0A087WZG4 1122 aa12.61□□□□□ -0.39
SP4-204ENST00000448246 PER1O15534 1290 aaPredicted RBP12.61□□□□□ -0.39
SP4-204ENST00000448246 GPTP24298 496 aa12.61□□□□□ -0.39
SP4-204ENST00000448246 SLC39A6Q13433 755 aa12.61□□□□□ -0.39
SP4-204ENST00000448246 CSPP1Q1MSJ5 1256 aa12.61□□□□□ -0.39
SP4-204ENST00000448246 AK7Q96M32 723 aa12.61□□□□□ -0.39
SP4-204ENST00000448246 ANXA1P04083 346 aa12.61□□□□□ -0.39
SP4-204ENST00000448246 PTMSP20962 102 aa12.61□□□□□ -0.39
SP4-204ENST00000448246 HOXC9P31274 260 aa12.61□□□□□ -0.39
SP4-204ENST00000448246 AACSQ86V21 672 aa12.61□□□□□ -0.39
SP4-204ENST00000448246 EXOC6BQ9Y2D4 811 aa12.61□□□□□ -0.39
SP4-204ENST00000448246 PLEKHG3A1L390 1219 aa12.6□□□□□ -0.39
SP4-204ENST00000448246 TRAK2O60296 914 aa12.6□□□□□ -0.39
SP4-204ENST00000448246 MCTP1Q6DN14 999 aa12.6□□□□□ -0.39
SP4-204ENST00000448246 DDX17Q92841 729 aaKnown RBP12.6□□□□□ -0.39
SP4-204ENST00000448246 HIP1O00291 1037 aa12.6□□□□□ -0.39
SP4-204ENST00000448246 SYAP1Q96A49 352 aaPredicted RBP12.6□□□□□ -0.39
SP4-204ENST00000448246 MTHFSDQ2M296 383 aaKnown RBP12.6□□□□□ -0.39
SP4-204ENST00000448246 C22orf23Q9BZE7 217 aa12.6□□□□□ -0.39
SP4-204ENST00000448246 FKBP4Q02790 459 aaKnown RBP eCLIP12.59□□□□□ -0.39
SP4-204ENST00000448246 TRIM29Q14134 588 aa12.59□□□□□ -0.39
SP4-204ENST00000448246 IL16Q14005 1332 aa12.59□□□□□ -0.39
SP4-204ENST00000448246 PI4KAP2A4QPH2 592 aa12.59□□□□□ -0.39
SP4-204ENST00000448246 PI4KAP1Q8N8J0 262 aa12.59□□□□□ -0.39
SP4-204ENST00000448246 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.59□□□□□ -0.39
SP4-204ENST00000448246 ATP6V1DQ9Y5K8 247 aa12.59□□□□□ -0.39
SP4-204ENST00000448246 POLR3AO14802 1390 aaPredicted RBP12.59□□□□□ -0.39
SP4-204ENST00000448246 FOXD4L6Q3SYB3 417 aaPredicted RBP12.59□□□□□ -0.39
SP4-204ENST00000448246 SAMD1Q6SPF0 538 aaPredicted RBP12.59□□□□□ -0.39
SP4-204ENST00000448246 FOXD4L3Q6VB84 417 aaPredicted RBP12.59□□□□□ -0.39
SP4-204ENST00000448246 PKNOX2Q96KN3 472 aa12.59□□□□□ -0.39
SP4-204ENST00000448246 METTL24Q5JXM2 366 aa12.59□□□□□ -0.39
SP4-204ENST00000448246 DNTTIP2Q5QJE6 756 aaKnown RBP12.58□□□□□ -0.4
SP4-204ENST00000448246 NFATC2IPQ8NCF5 419 aa12.58□□□□□ -0.4
SP4-204ENST00000448246 SMARCC1Q92922 1105 aaPredicted RBP12.58□□□□□ -0.4
SP4-204ENST00000448246 NKTRP30414 1462 aaKnown RBP12.58□□□□□ -0.4
SP4-204ENST00000448246 IFIT5Q13325 482 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms