RNA–Protein interactions for RNA: ENST00000447683.2

OTUB1-204, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,315 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-204ENST00000447683 EYA1Q99502 592 aa20.53■□□□□ 0.88
OTUB1-204ENST00000447683 USP35Q9P2H5 1018 aa20.53■□□□□ 0.88
OTUB1-204ENST00000447683 MTHFSDQ2M296 383 aaKnown RBP20.52■□□□□ 0.87
OTUB1-204ENST00000447683 TBC1D32Q96NH3 1257 aa20.51■□□□□ 0.87
OTUB1-204ENST00000447683 UPF2Q9HAU5 1272 aaKnown RBP20.5■□□□□ 0.87
OTUB1-204ENST00000447683 NWD1Q149M9 1564 aa20.5■□□□□ 0.87
OTUB1-204ENST00000447683 GCC1Q96CN9 775 aa20.5■□□□□ 0.87
OTUB1-204ENST00000447683 RGS12O14924 1447 aa20.5■□□□□ 0.87
OTUB1-204ENST00000447683 HOXC9P31274 260 aa20.49■□□□□ 0.87
OTUB1-204ENST00000447683 KRT24Q2M2I5 525 aa20.49■□□□□ 0.87
OTUB1-204ENST00000447683 GAS2L2Q8NHY3 880 aa20.49■□□□□ 0.87
OTUB1-204ENST00000447683 INTS3Q68E01 1043 aaKnown RBP20.49■□□□□ 0.87
OTUB1-204ENST00000447683 CHD1LQ86WJ1 897 aa20.49■□□□□ 0.87
OTUB1-204ENST00000447683 LRRC37A3O60309 1634 aa20.49■□□□□ 0.87
OTUB1-204ENST00000447683 FOXO3O43524 673 aa20.48■□□□□ 0.87
OTUB1-204ENST00000447683 SIRT2Q8IXJ6 389 aa20.48■□□□□ 0.87
OTUB1-204ENST00000447683 ABTB2Q8N961 1025 aa20.48■□□□□ 0.87
OTUB1-204ENST00000447683 PHF8Q9UPP1 1060 aa20.48■□□□□ 0.87
OTUB1-204ENST00000447683 HTATSF1O43719 755 aaKnown RBP20.47■□□□□ 0.87
OTUB1-204ENST00000447683 RTF1Q92541 710 aaKnown RBP20.47■□□□□ 0.87
OTUB1-204ENST00000447683 C1orf115Q9H7X2 142 aa20.47■□□□□ 0.87
OTUB1-204ENST00000447683 LTN1O94822 1766 aa20.46■□□□□ 0.87
OTUB1-204ENST00000447683 ADGRL3Q9HAR2 1447 aa20.46■□□□□ 0.87
OTUB1-204ENST00000447683 RTL1A6NKG5 1358 aa20.46■□□□□ 0.87
OTUB1-204ENST00000447683 LNPKQ9C0E8 428 aa20.45■□□□□ 0.87
OTUB1-204ENST00000447683 PTPRCP08575 1304 aa20.45■□□□□ 0.86
OTUB1-204ENST00000447683 NUTM2GQ5VZR2 741 aa20.45■□□□□ 0.86
OTUB1-204ENST00000447683 BECN1Q14457 450 aa20.43■□□□□ 0.86
OTUB1-204ENST00000447683 TSPYL4Q9UJ04 414 aa20.42■□□□□ 0.86
OTUB1-204ENST00000447683 NFAT5O94916 1531 aa20.42■□□□□ 0.86
OTUB1-204ENST00000447683 ANKRD45Q5TZF3 282 aa20.42■□□□□ 0.86
OTUB1-204ENST00000447683 MIS18AQ9NYP9 233 aa20.41■□□□□ 0.86
OTUB1-204ENST00000447683 NPHP4O75161 1426 aaPredicted RBP20.41■□□□□ 0.86
OTUB1-204ENST00000447683 CACNA1FO60840 1977 aa20.41■□□□□ 0.86
OTUB1-204ENST00000447683 BMP2KLQ5H9B9 411 aa20.4■□□□□ 0.86
OTUB1-204ENST00000447683 PHRF1Q9P1Y6 1649 aaKnown RBP20.4■□□□□ 0.86
OTUB1-204ENST00000447683 GNAT3A8MTJ3 354 aa20.39■□□□□ 0.86
OTUB1-204ENST00000447683 NFKBIBQ15653 356 aa20.39■□□□□ 0.86
OTUB1-204ENST00000447683 ATP10DQ9P241 1426 aa20.39■□□□□ 0.85
OTUB1-204ENST00000447683 SLC4A2P04920 1241 aa20.38■□□□□ 0.85
OTUB1-204ENST00000447683 IP6K1Q92551 441 aa20.38■□□□□ 0.85
OTUB1-204ENST00000447683 C22orf23Q9BZE7 217 aa20.38■□□□□ 0.85
OTUB1-204ENST00000447683 DCTPP1Q9H773 170 aa20.38■□□□□ 0.85
OTUB1-204ENST00000447683 MAP3K5Q99683 1374 aa20.38■□□□□ 0.85
OTUB1-204ENST00000447683 ANKRD44Q8N8A2 993 aa20.37■□□□□ 0.85
OTUB1-204ENST00000447683 RBM33Q96EV2 1170 aaKnown RBP20.37■□□□□ 0.85
OTUB1-204ENST00000447683 MSH6P52701 1360 aa20.37■□□□□ 0.85
OTUB1-204ENST00000447683 BABAM1Q9NWV8 329 aa20.37■□□□□ 0.85
OTUB1-204ENST00000447683 FAM208AQ9UK61 1670 aaKnown RBP20.36■□□□□ 0.85
OTUB1-204ENST00000447683 MFAP1P55081 439 aaKnown RBP20.36■□□□□ 0.85
OTUB1-204ENST00000447683 C14orf37Q86TY3 774 aa20.36■□□□□ 0.85
OTUB1-204ENST00000447683 RPAP2Q8IXW5 612 aaPredicted RBP20.36■□□□□ 0.85
OTUB1-204ENST00000447683 SOS1Q07889 1333 aaPredicted RBP20.35■□□□□ 0.85
OTUB1-204ENST00000447683 ESCO1Q5FWF5 840 aa20.35■□□□□ 0.85
OTUB1-204ENST00000447683 PSME1Q06323 249 aa20.35■□□□□ 0.85
OTUB1-204ENST00000447683 GLIPR1L2Q4G1C9 344 aa20.35■□□□□ 0.85
OTUB1-204ENST00000447683 IL17REQ8NFR9 667 aa20.35■□□□□ 0.85
OTUB1-204ENST00000447683 LTV1Q96GA3 475 aaPredicted RBP20.35■□□□□ 0.85
OTUB1-204ENST00000447683 KCNH5Q8NCM2 988 aa20.34■□□□□ 0.85
OTUB1-204ENST00000447683 TBC1D2Q9BYX2 928 aa20.34■□□□□ 0.85
OTUB1-204ENST00000447683 CEP85Q6P2H3 762 aa20.33■□□□□ 0.85
OTUB1-204ENST00000447683 G2E3Q7L622 706 aa20.33■□□□□ 0.85
OTUB1-204ENST00000447683 RGPD2P0DJD1 1756 aa20.32■□□□□ 0.84
OTUB1-204ENST00000447683 MEIS3Q99687 375 aa20.32■□□□□ 0.84
OTUB1-204ENST00000447683 CCT4P50991 539 aaKnown RBP20.31■□□□□ 0.84
OTUB1-204ENST00000447683 TAF7Q15545 349 aaPredicted RBP20.31■□□□□ 0.84
OTUB1-204ENST00000447683 RBM25P49756 843 aaKnown RBP20.31■□□□□ 0.84
OTUB1-204ENST00000447683 SLIT3O75094 1523 aa20.31■□□□□ 0.84
OTUB1-204ENST00000447683 N4BP2Q86UW6 1770 aaPredicted RBP20.31■□□□□ 0.84
OTUB1-204ENST00000447683 CCDC30Q5VVM6 783 aa20.3■□□□□ 0.84
OTUB1-204ENST00000447683 STK31Q9BXU1 1019 aa20.3■□□□□ 0.84
OTUB1-204ENST00000447683 ANTXR1Q9H6X2 564 aa20.3■□□□□ 0.84
OTUB1-204ENST00000447683 MED1Q15648 1581 aaPredicted RBP20.3■□□□□ 0.84
OTUB1-204ENST00000447683 USHBP1Q8N6Y0 703 aa20.3■□□□□ 0.84
OTUB1-204ENST00000447683 CEMIPQ8WUJ3 1361 aa20.29■□□□□ 0.84
OTUB1-204ENST00000447683 NBPF6Q5VWK0 638 aa20.29■□□□□ 0.84
OTUB1-204ENST00000447683 NBPF4Q96M43 638 aa20.29■□□□□ 0.84
OTUB1-204ENST00000447683 TRPM3Q9HCF6 1732 aaPredicted RBP20.29■□□□□ 0.84
OTUB1-204ENST00000447683 PLEKHM2Q8IWE5 1019 aa20.28■□□□□ 0.84
OTUB1-204ENST00000447683 LMO7Q8WWI1 1683 aa20.27■□□□□ 0.84
OTUB1-204ENST00000447683 F6X3S4 739 aa20.27■□□□□ 0.84
OTUB1-204ENST00000447683 ORAI2Q96SN7 254 aa20.27■□□□□ 0.84
OTUB1-204ENST00000447683 IL27Q8NEV9 243 aa20.27■□□□□ 0.84
OTUB1-204ENST00000447683 NCAPD2Q15021 1401 aa20.26■□□□□ 0.83
OTUB1-204ENST00000447683 FLIIQ13045 1269 aa20.26■□□□□ 0.83
OTUB1-204ENST00000447683 KDM3BQ7LBC6 1761 aa20.26■□□□□ 0.83
OTUB1-204ENST00000447683 KIF1AQ12756 1690 aa20.26■□□□□ 0.83
OTUB1-204ENST00000447683 FRAT2O75474 233 aaPredicted RBP20.25■□□□□ 0.83
OTUB1-204ENST00000447683 TBC1D9Q6ZT07 1266 aa20.25■□□□□ 0.83
OTUB1-204ENST00000447683 ARHGEF25Q86VW2 580 aa20.25■□□□□ 0.83
OTUB1-204ENST00000447683 GSPT1P15170 499 aaKnown RBP20.25■□□□□ 0.83
OTUB1-204ENST00000447683 SLC4A10Q6U841 1118 aa20.25■□□□□ 0.83
OTUB1-204ENST00000447683 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.25■□□□□ 0.83
OTUB1-204ENST00000447683 GCP02774 474 aa20.24■□□□□ 0.83
OTUB1-204ENST00000447683 SLKQ9H2G2 1235 aaPredicted RBP20.24■□□□□ 0.83
OTUB1-204ENST00000447683 PODXL2Q9NZ53 605 aa20.24■□□□□ 0.83
OTUB1-204ENST00000447683 PXDNLA1KZ92 1463 aa20.24■□□□□ 0.83
OTUB1-204ENST00000447683 HMMRO75330 724 aa20.24■□□□□ 0.83
OTUB1-204ENST00000447683 CAMTA1Q9Y6Y1 1673 aa20.23■□□□□ 0.83
OTUB1-204ENST00000447683 CDC45O75419 566 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms