RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 SIX5Q8N196 739 aa7.89□□□□□ -1.15
HMGB1P16-201ENST00000447155 ZNF594Q96JF6 807 aaPredicted RBP7.89□□□□□ -1.15
HMGB1P16-201ENST00000447155 MRGPRX2Q96LB1 330 aa7.89□□□□□ -1.15
HMGB1P16-201ENST00000447155 PCDHGA11Q9Y5H2 935 aa7.89□□□□□ -1.15
HMGB1P16-201ENST00000447155 CARNS1A5YM72 827 aa7.88□□□□□ -1.15
HMGB1P16-201ENST00000447155 PATL2C9JE40 543 aaKnown RBP7.88□□□□□ -1.15
HMGB1P16-201ENST00000447155 ZBTB7BO15156 539 aaPredicted RBP7.88□□□□□ -1.15
HMGB1P16-201ENST00000447155 DPYDQ12882 1025 aa7.88□□□□□ -1.15
HMGB1P16-201ENST00000447155 NR5A1Q13285 461 aa7.88□□□□□ -1.15
HMGB1P16-201ENST00000447155 ERVK-9P63128 1117 aa7.87□□□□□ -1.15
HMGB1P16-201ENST00000447155 ZNF697Q5TEC3 545 aa7.87□□□□□ -1.15
HMGB1P16-201ENST00000447155 CCDC102BQ68D86 513 aa7.87□□□□□ -1.15
HMGB1P16-201ENST00000447155 B4GALNT3Q6L9W6 998 aa7.87□□□□□ -1.15
HMGB1P16-201ENST00000447155 ESF1Q9H501 851 aaKnown RBP7.87□□□□□ -1.15
HMGB1P16-201ENST00000447155 KIAA1024Q9UPX6 916 aa7.87□□□□□ -1.15
HMGB1P16-201ENST00000447155 RBM19Q9Y4C8 960 aaKnown RBP7.87□□□□□ -1.15
HMGB1P16-201ENST00000447155 V9GY48 417 aaPredicted RBP7.87□□□□□ -1.15
HMGB1P16-201ENST00000447155 PSME1Q06323 249 aa7.86□□□□□ -1.15
HMGB1P16-201ENST00000447155 KCNA1Q09470 495 aa7.86□□□□□ -1.15
HMGB1P16-201ENST00000447155 SWI5Q1ZZU3 235 aa7.86□□□□□ -1.15
HMGB1P16-201ENST00000447155 CC2D2BQ6DHV5 1058 aa7.86□□□□□ -1.15
HMGB1P16-201ENST00000447155 CCDC116Q8IYX3 515 aa7.86□□□□□ -1.15
HMGB1P16-201ENST00000447155 PRKD2Q9BZL6 878 aa7.86□□□□□ -1.15
HMGB1P16-201ENST00000447155 PODXL2Q9NZ53 605 aa7.86□□□□□ -1.15
HMGB1P16-201ENST00000447155 DKK1O94907 266 aa7.85□□□□□ -1.15
HMGB1P16-201ENST00000447155 SCTRP47872 440 aa7.85□□□□□ -1.15
HMGB1P16-201ENST00000447155 SEC13P55735 322 aa7.85□□□□□ -1.15
HMGB1P16-201ENST00000447155 TPCN2Q8NHX9 752 aa7.85□□□□□ -1.15
HMGB1P16-201ENST00000447155 CLP1Q92989 425 aaKnown RBP7.85□□□□□ -1.15
HMGB1P16-201ENST00000447155 TMPRSS4Q9NRS4 437 aa7.85□□□□□ -1.15
HMGB1P16-201ENST00000447155 FAM69CQ0P6D2 419 aa7.84□□□□□ -1.15
HMGB1P16-201ENST00000447155 FOXC1Q12948 553 aa7.84□□□□□ -1.15
HMGB1P16-201ENST00000447155 PPP1R26Q5T8A7 1209 aaPredicted RBP7.84□□□□□ -1.15
HMGB1P16-201ENST00000447155 CYLDQ9NQC7 956 aa7.84□□□□□ -1.15
HMGB1P16-201ENST00000447155 PGPEP1Q9NXJ5 209 aa7.84□□□□□ -1.15
HMGB1P16-201ENST00000447155 PKD2L1Q9P0L9 805 aa7.84□□□□□ -1.15
HMGB1P16-201ENST00000447155 ALDH1A1P00352 501 aa7.83□□□□□ -1.16
HMGB1P16-201ENST00000447155 NR3C2P08235 984 aa7.83□□□□□ -1.16
HMGB1P16-201ENST00000447155 MYT1Q01538 1121 aa7.83□□□□□ -1.16
HMGB1P16-201ENST00000447155 ZNF784Q8NCA9 323 aaPredicted RBP7.83□□□□□ -1.16
HMGB1P16-201ENST00000447155 SNIP1Q8TAD8 396 aaKnown RBP7.83□□□□□ -1.16
HMGB1P16-201ENST00000447155 OSBPL3Q9H4L5 887 aa7.83□□□□□ -1.16
HMGB1P16-201ENST00000447155 EMILIN1Q9Y6C2 1016 aa7.83□□□□□ -1.16
HMGB1P16-201ENST00000447155 M0R2N6 131 aa7.82□□□□□ -1.16
HMGB1P16-201ENST00000447155 WASF2Q9Y6W5 498 aa7.82□□□□□ -1.16
HMGB1P16-201ENST00000447155 SFI1A8K8P3 1242 aa7.81□□□□□ -1.16
HMGB1P16-201ENST00000447155 LILRA1O75019 489 aa7.81□□□□□ -1.16
HMGB1P16-201ENST00000447155 GDF9O60383 454 aa7.8□□□□□ -1.16
HMGB1P16-201ENST00000447155 NNTQ13423 1086 aa7.8□□□□□ -1.16
HMGB1P16-201ENST00000447155 CYP2U1Q7Z449 544 aa7.8□□□□□ -1.16
HMGB1P16-201ENST00000447155 TTC24A2A3L6 582 aaPredicted RBP7.79□□□□□ -1.16
HMGB1P16-201ENST00000447155 WASLO00401 505 aaPredicted RBP7.79□□□□□ -1.16
HMGB1P16-201ENST00000447155 ATP2B4P23634 1241 aa7.79□□□□□ -1.16
HMGB1P16-201ENST00000447155 SSFA2P28290 1259 aa7.79□□□□□ -1.16
HMGB1P16-201ENST00000447155 CYP4X1Q8N118 509 aa7.79□□□□□ -1.16
HMGB1P16-201ENST00000447155 SLAIN2Q9P270 581 aa7.79□□□□□ -1.16
HMGB1P16-201ENST00000447155 TMEM229AB2RXF0 380 aa7.78□□□□□ -1.16
HMGB1P16-201ENST00000447155 GNRH1P01148 92 aa7.78□□□□□ -1.16
HMGB1P16-201ENST00000447155 ADD1P35611 737 aaKnown RBP7.78□□□□□ -1.16
HMGB1P16-201ENST00000447155 SCNN1DP51172 638 aa7.78□□□□□ -1.16
HMGB1P16-201ENST00000447155 GDF10P55107 478 aa7.78□□□□□ -1.16
HMGB1P16-201ENST00000447155 PHLDB3Q6NSJ2 640 aa7.78□□□□□ -1.16
HMGB1P16-201ENST00000447155 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.78□□□□□ -1.16
HMGB1P16-201ENST00000447155 ZNF358Q9NW07 568 aa7.78□□□□□ -1.16
HMGB1P16-201ENST00000447155 BACH1O14867 736 aa7.77□□□□□ -1.17
HMGB1P16-201ENST00000447155 PRR20EP86478 221 aa7.77□□□□□ -1.17
HMGB1P16-201ENST00000447155 PRR20CP86479 221 aa7.77□□□□□ -1.17
HMGB1P16-201ENST00000447155 PRR20DP86480 221 aa7.77□□□□□ -1.17
HMGB1P16-201ENST00000447155 PRR20BP86481 221 aa7.77□□□□□ -1.17
HMGB1P16-201ENST00000447155 PRR20AP86496 221 aa7.77□□□□□ -1.17
HMGB1P16-201ENST00000447155 ESCO1Q5FWF5 840 aa7.77□□□□□ -1.17
HMGB1P16-201ENST00000447155 HINFPQ9BQA5 517 aa7.77□□□□□ -1.17
HMGB1P16-201ENST00000447155 GZF1Q9H116 711 aaPredicted RBP7.77□□□□□ -1.17
HMGB1P16-201ENST00000447155 TOR4AQ9NXH8 423 aa7.77□□□□□ -1.17
HMGB1P16-201ENST00000447155 GNEQ9Y223 722 aaKnown RBP7.77□□□□□ -1.17
HMGB1P16-201ENST00000447155 J3QL48 77 aa7.76□□□□□ -1.17
HMGB1P16-201ENST00000447155 TNFRSF10AO00220 468 aa7.76□□□□□ -1.17
HMGB1P16-201ENST00000447155 PRMT3O60678 531 aa7.76□□□□□ -1.17
HMGB1P16-201ENST00000447155 INHAP05111 366 aa7.76□□□□□ -1.17
HMGB1P16-201ENST00000447155 ADH1AP07327 375 aa7.76□□□□□ -1.17
HMGB1P16-201ENST00000447155 TSEN2Q8NCE0 465 aaKnown RBP7.76□□□□□ -1.17
HMGB1P16-201ENST00000447155 C1orf216Q8TAB5 229 aa7.76□□□□□ -1.17
HMGB1P16-201ENST00000447155 CCER1Q8TC90 406 aaPredicted RBP7.76□□□□□ -1.17
HMGB1P16-201ENST00000447155 IVNS1ABPQ9Y6Y0 642 aa7.76□□□□□ -1.17
HMGB1P16-201ENST00000447155 ARID4AP29374 1257 aaPredicted RBP7.75□□□□□ -1.17
HMGB1P16-201ENST00000447155 OCLNQ16625 522 aa7.75□□□□□ -1.17
HMGB1P16-201ENST00000447155 TXNDC2Q86VQ3 553 aa7.75□□□□□ -1.17
HMGB1P16-201ENST00000447155 PRIMPOLQ96LW4 560 aa7.75□□□□□ -1.17
HMGB1P16-201ENST00000447155 SLC4A9Q96Q91 983 aa7.75□□□□□ -1.17
HMGB1P16-201ENST00000447155 KLF16Q9BXK1 252 aaPredicted RBP7.75□□□□□ -1.17
HMGB1P16-201ENST00000447155 ETNK1Q9HBU6 452 aa7.75□□□□□ -1.17
HMGB1P16-201ENST00000447155 CXXC1Q9P0U4 656 aaPredicted RBP7.75□□□□□ -1.17
HMGB1P16-201ENST00000447155 ZIC2O95409 532 aaPredicted RBP7.74□□□□□ -1.17
HMGB1P16-201ENST00000447155 STAU1O95793 577 aaKnown RBP7.74□□□□□ -1.17
HMGB1P16-201ENST00000447155 SMPD1P17405 629 aa7.74□□□□□ -1.17
HMGB1P16-201ENST00000447155 WDR4P57081 412 aaKnown RBP7.74□□□□□ -1.17
HMGB1P16-201ENST00000447155 Q6ZVU0 165 aa7.74□□□□□ -1.17
HMGB1P16-201ENST00000447155 ITPKCQ96DU7 683 aa7.74□□□□□ -1.17
HMGB1P16-201ENST00000447155 CCDC9Q9Y3X0 531 aaKnown RBP7.74□□□□□ -1.17
HMGB1P16-201ENST00000447155 RGS20O76081 388 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms