RNA–Protein interactions for RNA: ENST00000446851.6

LIN54-203, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,083 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-203ENST00000446851 KLHL34Q8N239 644 aa13.44□□□□□ -0.26
LIN54-203ENST00000446851 RUNDC1Q96C34 613 aa13.44□□□□□ -0.26
LIN54-203ENST00000446851 PARD3Q8TEW0 1356 aa13.44□□□□□ -0.26
LIN54-203ENST00000446851 EIF2S2P20042 333 aaKnown RBP13.44□□□□□ -0.26
LIN54-203ENST00000446851 AMOTQ4VCS5 1084 aa13.44□□□□□ -0.26
LIN54-203ENST00000446851 COL16A1Q07092 1604 aaPredicted RBP13.44□□□□□ -0.26
LIN54-203ENST00000446851 AHDC1Q5TGY3 1603 aaPredicted RBP13.44□□□□□ -0.26
LIN54-203ENST00000446851 LGR6Q9HBX8 967 aa13.44□□□□□ -0.26
LIN54-203ENST00000446851 CPDO75976 1380 aa13.43□□□□□ -0.26
LIN54-203ENST00000446851 GNAT3A8MTJ3 354 aa13.43□□□□□ -0.26
LIN54-203ENST00000446851 ZNF428Q96B54 188 aa13.43□□□□□ -0.26
LIN54-203ENST00000446851 CDCA7Q9BWT1 371 aaPredicted RBP13.43□□□□□ -0.26
LIN54-203ENST00000446851 MED1Q15648 1581 aaPredicted RBP13.42□□□□□ -0.26
LIN54-203ENST00000446851 CAMTA1Q9Y6Y1 1673 aa13.42□□□□□ -0.26
LIN54-203ENST00000446851 MARCH10Q8NA82 808 aaPredicted RBP13.42□□□□□ -0.26
LIN54-203ENST00000446851 BCL11AQ9H165 835 aa13.42□□□□□ -0.26
LIN54-203ENST00000446851 NPHP1O15259 732 aa13.42□□□□□ -0.26
LIN54-203ENST00000446851 FAM196AQ6ZSG2 479 aa13.42□□□□□ -0.26
LIN54-203ENST00000446851 PNISRQ8TF01 805 aaKnown RBP13.41□□□□□ -0.26
LIN54-203ENST00000446851 EN1Q05925 392 aaPredicted RBP13.41□□□□□ -0.26
LIN54-203ENST00000446851 TSPYL4Q9UJ04 414 aa13.41□□□□□ -0.26
LIN54-203ENST00000446851 PCDH11XQ9BZA7 1347 aa13.41□□□□□ -0.26
LIN54-203ENST00000446851 PCDH11YQ9BZA8 1340 aa13.41□□□□□ -0.26
LIN54-203ENST00000446851 CYP27B1O15528 508 aa13.41□□□□□ -0.26
LIN54-203ENST00000446851 BCL9LQ86UU0 1499 aa13.41□□□□□ -0.26
LIN54-203ENST00000446851 THRAP3Q9Y2W1 955 aaKnown RBP13.4□□□□□ -0.26
LIN54-203ENST00000446851 PPP1R1BQ9UD71 204 aaPredicted RBP13.4□□□□□ -0.26
LIN54-203ENST00000446851 COL5A2P05997 1499 aaPredicted RBP13.4□□□□□ -0.26
LIN54-203ENST00000446851 HSP90AB1P08238 724 aaKnown RBP13.39□□□□□ -0.27
LIN54-203ENST00000446851 PTF1AQ7RTS3 328 aa13.39□□□□□ -0.27
LIN54-203ENST00000446851 BTBD11A6QL63 1104 aa13.39□□□□□ -0.27
LIN54-203ENST00000446851 PHF14O94880 888 aa13.39□□□□□ -0.27
LIN54-203ENST00000446851 TMPOP42166 694 aaKnown RBP13.39□□□□□ -0.27
LIN54-203ENST00000446851 RSPH6AQ9H0K4 717 aa13.39□□□□□ -0.27
LIN54-203ENST00000446851 BLMP54132 1417 aaPredicted RBP13.39□□□□□ -0.27
LIN54-203ENST00000446851 NPC1L1Q9UHC9 1359 aa13.39□□□□□ -0.27
LIN54-203ENST00000446851 BAG6P46379 1132 aa13.39□□□□□ -0.27
LIN54-203ENST00000446851 IGSF1Q8N6C5 1336 aa13.38□□□□□ -0.27
LIN54-203ENST00000446851 NFE2L2Q16236 605 aa13.38□□□□□ -0.27
LIN54-203ENST00000446851 RTL1A6NKG5 1358 aa13.38□□□□□ -0.27
LIN54-203ENST00000446851 PIK3C2AO00443 1686 aa13.38□□□□□ -0.27
LIN54-203ENST00000446851 CCER2I3L3R5 266 aa13.38□□□□□ -0.27
LIN54-203ENST00000446851 PIP4K2AP48426 406 aaPredicted RBP13.38□□□□□ -0.27
LIN54-203ENST00000446851 PHKG2P15735 406 aa13.38□□□□□ -0.27
LIN54-203ENST00000446851 LMOD3Q0VAK6 560 aa13.38□□□□□ -0.27
LIN54-203ENST00000446851 SRCAPQ6ZRS2 3230 aa13.37□□□□□ -0.27
LIN54-203ENST00000446851 CANXP27824 592 aaKnown RBP13.37□□□□□ -0.27
LIN54-203ENST00000446851 TSR2Q969E8 191 aaKnown RBP13.37□□□□□ -0.27
LIN54-203ENST00000446851 AKAP4Q5JQC9 854 aa13.36□□□□□ -0.27
LIN54-203ENST00000446851 BARGINQ6ZT62 677 aa13.36□□□□□ -0.27
LIN54-203ENST00000446851 ASAP1Q9ULH1 1129 aa13.36□□□□□ -0.27
LIN54-203ENST00000446851 NHSL1Q5SYE7 1610 aa13.36□□□□□ -0.27
LIN54-203ENST00000446851 ATP6V1AP38606 617 aa13.36□□□□□ -0.27
LIN54-203ENST00000446851 DCAF5Q96JK2 942 aa13.36□□□□□ -0.27
LIN54-203ENST00000446851 CCNL1Q9UK58 526 aaPredicted RBP13.34□□□□□ -0.27
LIN54-203ENST00000446851 PSDA5PKW4 1024 aaPredicted RBP13.34□□□□□ -0.27
LIN54-203ENST00000446851 AIMP1Q12904 312 aaKnown RBP13.34□□□□□ -0.27
LIN54-203ENST00000446851 BCL2L13Q9BXK5 485 aa13.34□□□□□ -0.27
LIN54-203ENST00000446851 FAM177BA6PVY3 158 aa13.34□□□□□ -0.27
LIN54-203ENST00000446851 TFCP2L1Q9NZI6 479 aa13.34□□□□□ -0.27
LIN54-203ENST00000446851 MYOM1P52179 1685 aa13.33□□□□□ -0.27
LIN54-203ENST00000446851 RNMTO43148 476 aaKnown RBP13.33□□□□□ -0.28
LIN54-203ENST00000446851 MYL6BP14649 208 aa13.33□□□□□ -0.28
LIN54-203ENST00000446851 SMIM5Q71RC9 77 aa13.33□□□□□ -0.28
LIN54-203ENST00000446851 IL17REQ8NFR9 667 aa13.33□□□□□ -0.28
LIN54-203ENST00000446851 PIGBQ92521 554 aa13.33□□□□□ -0.28
LIN54-203ENST00000446851 WWC3Q9ULE0 1092 aa13.33□□□□□ -0.28
LIN54-203ENST00000446851 SLIT2O94813 1529 aa13.33□□□□□ -0.28
LIN54-203ENST00000446851 TOPAZ1Q8N9V7 1692 aa13.33□□□□□ -0.28
LIN54-203ENST00000446851 CDCA7LQ96GN5 454 aa13.32□□□□□ -0.28
LIN54-203ENST00000446851 MAP2P11137 1827 aaKnown RBP13.31□□□□□ -0.28
LIN54-203ENST00000446851 KIF24Q5T7B8 1368 aa13.31□□□□□ -0.28
LIN54-203ENST00000446851 KCNQ3O43525 872 aa13.31□□□□□ -0.28
LIN54-203ENST00000446851 EZH2Q15910 746 aaKnown RBP13.31□□□□□ -0.28
LIN54-203ENST00000446851 KRT24Q2M2I5 525 aa13.31□□□□□ -0.28
LIN54-203ENST00000446851 TAF7Q15545 349 aaPredicted RBP13.31□□□□□ -0.28
LIN54-203ENST00000446851 MEGF6O75095 1541 aa13.31□□□□□ -0.28
LIN54-203ENST00000446851 CDK12Q9NYV4 1490 aaPredicted RBP13.31□□□□□ -0.28
LIN54-203ENST00000446851 ANXA1P04083 346 aa13.31□□□□□ -0.28
LIN54-203ENST00000446851 CALD1Q05682 793 aaKnown RBP13.31□□□□□ -0.28
LIN54-203ENST00000446851 BICDL1Q6ZP65 573 aa13.3□□□□□ -0.28
LIN54-203ENST00000446851 FRAT1Q92837 279 aaPredicted RBP13.3□□□□□ -0.28
LIN54-203ENST00000446851 EP400Q96L91 3159 aa13.3□□□□□ -0.28
LIN54-203ENST00000446851 AK7Q96M32 723 aa13.3□□□□□ -0.28
LIN54-203ENST00000446851 GOLGA2Q08379 1002 aa13.3□□□□□ -0.28
LIN54-203ENST00000446851 MON2Q7Z3U7 1717 aa13.3□□□□□ -0.28
LIN54-203ENST00000446851 MAP3K5Q99683 1374 aa13.29□□□□□ -0.28
LIN54-203ENST00000446851 NFAT5O94916 1531 aa13.29□□□□□ -0.28
LIN54-203ENST00000446851 AKAP12Q02952 1782 aa13.29□□□□□ -0.28
LIN54-203ENST00000446851 SLC52A2Q9HAB3 445 aa13.29□□□□□ -0.28
LIN54-203ENST00000446851 NBPF14Q5TI25 921 aa13.28□□□□□ -0.28
LIN54-203ENST00000446851 NRKQ7Z2Y5 1582 aa13.28□□□□□ -0.28
LIN54-203ENST00000446851 WWC1Q8IX03 1113 aa13.28□□□□□ -0.28
LIN54-203ENST00000446851 TRPM3Q9HCF6 1732 aaPredicted RBP13.28□□□□□ -0.28
LIN54-203ENST00000446851 GNPATO15228 680 aa13.28□□□□□ -0.28
LIN54-203ENST00000446851 GTF2E1P29083 439 aaPredicted RBP13.27□□□□□ -0.28
LIN54-203ENST00000446851 ZNF496Q96IT1 587 aaPredicted RBP13.27□□□□□ -0.28
LIN54-203ENST00000446851 ATRNO75882 1429 aa13.27□□□□□ -0.28
LIN54-203ENST00000446851 SLIT3O75094 1523 aa13.27□□□□□ -0.29
LIN54-203ENST00000446851 GNAI1P63096 354 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms