RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 CHL1O00533 1208 aa17.38■□□□□ 0.37
RBM39-216ENST00000444878 PROSER2Q86WR7 435 aaPredicted RBP17.38■□□□□ 0.37
RBM39-216ENST00000444878 GAS2L2Q8NHY3 880 aa17.38■□□□□ 0.37
RBM39-216ENST00000444878 C8orf34Q49A92 452 aa17.38■□□□□ 0.37
RBM39-216ENST00000444878 VIRMAQ69YN4 1812 aaKnown RBP17.37■□□□□ 0.37
RBM39-216ENST00000444878 FOXO3O43524 673 aa17.37■□□□□ 0.37
RBM39-216ENST00000444878 LTV1Q96GA3 475 aaPredicted RBP17.37■□□□□ 0.37
RBM39-216ENST00000444878 ZBTB40Q9NUA8 1239 aa17.37■□□□□ 0.37
RBM39-216ENST00000444878 NOP58Q9Y2X3 529 aaKnown RBP17.37■□□□□ 0.37
RBM39-216ENST00000444878 RTL1A6NKG5 1358 aa17.37■□□□□ 0.37
RBM39-216ENST00000444878 ORAI2Q96SN7 254 aa17.36■□□□□ 0.37
RBM39-216ENST00000444878 PDZRN3Q9UPQ7 1066 aa17.36■□□□□ 0.37
RBM39-216ENST00000444878 HDAC1Q13547 482 aaPredicted RBP17.35■□□□□ 0.37
RBM39-216ENST00000444878 KCNH5Q8NCM2 988 aa17.35■□□□□ 0.37
RBM39-216ENST00000444878 CRB1P82279 1406 aa17.35■□□□□ 0.37
RBM39-216ENST00000444878 CHMP4BQ9H444 224 aaKnown RBP17.35■□□□□ 0.37
RBM39-216ENST00000444878 KIAA0232Q92628 1395 aa17.34■□□□□ 0.37
RBM39-216ENST00000444878 NFAT5O94916 1531 aa17.34■□□□□ 0.37
RBM39-216ENST00000444878 ZBTB47Q9UFB7 747 aaPredicted RBP17.34■□□□□ 0.37
RBM39-216ENST00000444878 IP6K1Q92551 441 aa17.33■□□□□ 0.37
RBM39-216ENST00000444878 API5Q9BZZ5 524 aaKnown RBP17.33■□□□□ 0.37
RBM39-216ENST00000444878 HTATSF1O43719 755 aaKnown RBP17.32■□□□□ 0.36
RBM39-216ENST00000444878 KRT24Q2M2I5 525 aa17.32■□□□□ 0.36
RBM39-216ENST00000444878 C19orf44Q9H6X5 657 aa17.32■□□□□ 0.36
RBM39-216ENST00000444878 ABCC4O15439 1325 aa17.32■□□□□ 0.36
RBM39-216ENST00000444878 XPCQ01831 940 aaPredicted RBP17.32■□□□□ 0.36
RBM39-216ENST00000444878 GNAT3A8MTJ3 354 aa17.31■□□□□ 0.36
RBM39-216ENST00000444878 TSPYL4Q9UJ04 414 aa17.31■□□□□ 0.36
RBM39-216ENST00000444878 KIF1AQ12756 1690 aa17.31■□□□□ 0.36
RBM39-216ENST00000444878 ZBTB7CA1YPR0 619 aa17.3■□□□□ 0.36
RBM39-216ENST00000444878 ZBTB7BO15156 539 aaPredicted RBP17.3■□□□□ 0.36
RBM39-216ENST00000444878 MIS18AQ9NYP9 233 aa17.3■□□□□ 0.36
RBM39-216ENST00000444878 PHRF1Q9P1Y6 1649 aaKnown RBP17.3■□□□□ 0.36
RBM39-216ENST00000444878 LMOD2Q6P5Q4 547 aa17.3■□□□□ 0.36
RBM39-216ENST00000444878 TMEM132AQ24JP5 1023 aa17.29■□□□□ 0.36
RBM39-216ENST00000444878 USHBP1Q8N6Y0 703 aa17.29■□□□□ 0.36
RBM39-216ENST00000444878 RGPD2P0DJD1 1756 aa17.29■□□□□ 0.36
RBM39-216ENST00000444878 C1orf167Q5SNV9 1468 aa17.29■□□□□ 0.36
RBM39-216ENST00000444878 TRPM3Q9HCF6 1732 aaPredicted RBP17.28■□□□□ 0.36
RBM39-216ENST00000444878 GCP02774 474 aa17.28■□□□□ 0.36
RBM39-216ENST00000444878 SMC5Q8IY18 1101 aa17.28■□□□□ 0.36
RBM39-216ENST00000444878 LRRC37A3O60309 1634 aa17.28■□□□□ 0.36
RBM39-216ENST00000444878 MAP3K5Q99683 1374 aa17.28■□□□□ 0.36
RBM39-216ENST00000444878 KRT28Q7Z3Y7 464 aa17.27■□□□□ 0.36
RBM39-216ENST00000444878 PLEKHG5O94827 1062 aa17.27■□□□□ 0.35
RBM39-216ENST00000444878 DDRGK1Q96HY6 314 aa17.27■□□□□ 0.35
RBM39-216ENST00000444878 STRCP1A6NGW2 1772 aa17.27■□□□□ 0.35
RBM39-216ENST00000444878 ATF3P18847 181 aa17.26■□□□□ 0.35
RBM39-216ENST00000444878 NBPF6Q5VWK0 638 aa17.26■□□□□ 0.35
RBM39-216ENST00000444878 NBPF4Q96M43 638 aa17.26■□□□□ 0.35
RBM39-216ENST00000444878 SLIT3O75094 1523 aa17.26■□□□□ 0.35
RBM39-216ENST00000444878 CACNA1FO60840 1977 aa17.25■□□□□ 0.35
RBM39-216ENST00000444878 MSH6P52701 1360 aa17.25■□□□□ 0.35
RBM39-216ENST00000444878 TMEM94Q12767 1356 aa17.25■□□□□ 0.35
RBM39-216ENST00000444878 PTPRCP08575 1304 aa17.25■□□□□ 0.35
RBM39-216ENST00000444878 ARHGEF25Q86VW2 580 aa17.24■□□□□ 0.35
RBM39-216ENST00000444878 C1orf115Q9H7X2 142 aa17.24■□□□□ 0.35
RBM39-216ENST00000444878 SLC4A2P04920 1241 aa17.24■□□□□ 0.35
RBM39-216ENST00000444878 IL17REQ8NFR9 667 aa17.24■□□□□ 0.35
RBM39-216ENST00000444878 INTS3Q68E01 1043 aaKnown RBP17.23■□□□□ 0.35
RBM39-216ENST00000444878 USP19O94966 1318 aa17.22■□□□□ 0.35
RBM39-216ENST00000444878 TAF7Q15545 349 aaPredicted RBP17.22■□□□□ 0.35
RBM39-216ENST00000444878 RGS12O14924 1447 aa17.22■□□□□ 0.35
RBM39-216ENST00000444878 MST1RQ04912 1400 aa17.22■□□□□ 0.35
RBM39-216ENST00000444878 HSPA2P54652 639 aa17.21■□□□□ 0.35
RBM39-216ENST00000444878 LRRC59Q96AG4 307 aaKnown RBP17.21■□□□□ 0.35
RBM39-216ENST00000444878 BABAM1Q9NWV8 329 aa17.21■□□□□ 0.35
RBM39-216ENST00000444878 DCCP43146 1447 aa17.21■□□□□ 0.35
RBM39-216ENST00000444878 NCOA3Q9Y6Q9 1424 aa17.21■□□□□ 0.35
RBM39-216ENST00000444878 ALS2Q96Q42 1657 aa17.21■□□□□ 0.35
RBM39-216ENST00000444878 NUCB1Q02818 461 aa17.21■□□□□ 0.35
RBM39-216ENST00000444878 GCC1Q96CN9 775 aa17.21■□□□□ 0.35
RBM39-216ENST00000444878 RGPD5Q99666 1765 aa17.21■□□□□ 0.34
RBM39-216ENST00000444878 STK31Q9BXU1 1019 aa17.2■□□□□ 0.34
RBM39-216ENST00000444878 CADPS2Q86UW7 1296 aa17.18■□□□□ 0.34
RBM39-216ENST00000444878 CHD1LQ86WJ1 897 aa17.18■□□□□ 0.34
RBM39-216ENST00000444878 ANKRD24Q8TF21 1146 aa17.18■□□□□ 0.34
RBM39-216ENST00000444878 LNPKQ9C0E8 428 aa17.18■□□□□ 0.34
RBM39-216ENST00000444878 SEC24BO95487 1268 aa17.18■□□□□ 0.34
RBM39-216ENST00000444878 PLEKHO1Q53GL0 409 aaPredicted RBP17.18■□□□□ 0.34
RBM39-216ENST00000444878 CCDC30Q5VVM6 783 aa17.18■□□□□ 0.34
RBM39-216ENST00000444878 SIRT2Q8IXJ6 389 aa17.18■□□□□ 0.34
RBM39-216ENST00000444878 FAM208AQ9UK61 1670 aaKnown RBP17.18■□□□□ 0.34
RBM39-216ENST00000444878 SOS1Q07889 1333 aaPredicted RBP17.18■□□□□ 0.34
RBM39-216ENST00000444878 LMO7Q8WWI1 1683 aa17.17■□□□□ 0.34
RBM39-216ENST00000444878 CEMIPQ8WUJ3 1361 aa17.17■□□□□ 0.34
RBM39-216ENST00000444878 AMOTQ4VCS5 1084 aa17.17■□□□□ 0.34
RBM39-216ENST00000444878 ANKRD45Q5TZF3 282 aa17.17■□□□□ 0.34
RBM39-216ENST00000444878 G2E3Q7L622 706 aa17.17■□□□□ 0.34
RBM39-216ENST00000444878 UPF2Q9HAU5 1272 aaKnown RBP17.17■□□□□ 0.34
RBM39-216ENST00000444878 AKAP4Q5JQC9 854 aa17.16■□□□□ 0.34
RBM39-216ENST00000444878 ZNF530Q6P9A1 599 aaPredicted RBP17.16■□□□□ 0.34
RBM39-216ENST00000444878 AXIN2Q9Y2T1 843 aa17.16■□□□□ 0.34
RBM39-216ENST00000444878 ZC3H6P61129 1189 aaKnown RBP17.15■□□□□ 0.34
RBM39-216ENST00000444878 NCAPD2Q15021 1401 aa17.15■□□□□ 0.34
RBM39-216ENST00000444878 DDX17Q92841 729 aaKnown RBP17.15■□□□□ 0.34
RBM39-216ENST00000444878 LGR6Q9HBX8 967 aa17.15■□□□□ 0.34
RBM39-216ENST00000444878 NPHP3Q7Z494 1330 aa17.15■□□□□ 0.34
RBM39-216ENST00000444878 MED1Q15648 1581 aaPredicted RBP17.15■□□□□ 0.34
RBM39-216ENST00000444878 SLC4A10Q6U841 1118 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms