RNA–Protein interactions for RNA: ENST00000444798.1

CACFD1-203, Transcript of calcium channel flower domain containing 1, humanhuman

TSL 5

Gene CACFD1, Length 356 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-203ENST00000444798 ZEB1P37275 1124 aaPredicted RBP16.82■□□□□ 0.28
CACFD1-203ENST00000444798 PARD3Q8TEW0 1356 aa16.8■□□□□ 0.28
CACFD1-203ENST00000444798 RGPD3A6NKT7 1758 aaPredicted RBP16.8■□□□□ 0.28
CACFD1-203ENST00000444798 RGPD4Q7Z3J3 1758 aa16.8■□□□□ 0.28
CACFD1-203ENST00000444798 IGSF1Q8N6C5 1336 aa16.8■□□□□ 0.28
CACFD1-203ENST00000444798 PDE3BQ13370 1112 aa16.8■□□□□ 0.28
CACFD1-203ENST00000444798 KCNQ2O43526 872 aa16.79■□□□□ 0.28
CACFD1-203ENST00000444798 IL13P35225 146 aa16.79■□□□□ 0.28
CACFD1-203ENST00000444798 ACSBG1Q96GR2 724 aa16.78■□□□□ 0.28
CACFD1-203ENST00000444798 TUBGCP6Q96RT7 1819 aa16.77■□□□□ 0.28
CACFD1-203ENST00000444798 PPP2R1AP30153 589 aa16.77■□□□□ 0.28
CACFD1-203ENST00000444798 SCN11AQ9UI33 1791 aa16.77■□□□□ 0.27
CACFD1-203ENST00000444798 LY75O60449 1722 aa16.76■□□□□ 0.27
CACFD1-203ENST00000444798 EXOC5O00471 708 aa16.76■□□□□ 0.27
CACFD1-203ENST00000444798 CYP27B1O15528 508 aa16.76■□□□□ 0.27
CACFD1-203ENST00000444798 EN1Q05925 392 aaPredicted RBP16.76■□□□□ 0.27
CACFD1-203ENST00000444798 DDX54Q8TDD1 881 aaKnown RBP16.76■□□□□ 0.27
CACFD1-203ENST00000444798 BCL9O00512 1426 aa16.76■□□□□ 0.27
CACFD1-203ENST00000444798 DLG5Q8TDM6 1919 aa16.76■□□□□ 0.27
CACFD1-203ENST00000444798 FAM196AQ6ZSG2 479 aa16.75■□□□□ 0.27
CACFD1-203ENST00000444798 CDCA7Q9BWT1 371 aaPredicted RBP16.75■□□□□ 0.27
CACFD1-203ENST00000444798 PAPPAQ13219 1627 aa16.74■□□□□ 0.27
CACFD1-203ENST00000444798 HMOX1P09601 288 aa16.73■□□□□ 0.27
CACFD1-203ENST00000444798 EZH2Q15910 746 aaKnown RBP16.73■□□□□ 0.27
CACFD1-203ENST00000444798 ZCRB1Q8TBF4 217 aaKnown RBP16.73■□□□□ 0.27
CACFD1-203ENST00000444798 KDRP35968 1356 aa16.73■□□□□ 0.27
CACFD1-203ENST00000444798 TAF1LQ8IZX4 1826 aa16.73■□□□□ 0.27
CACFD1-203ENST00000444798 TATP17735 454 aaPredicted RBP16.72■□□□□ 0.27
CACFD1-203ENST00000444798 KDM6AO15550 1401 aaPredicted RBP16.71■□□□□ 0.27
CACFD1-203ENST00000444798 SULT6B1Q6IMI4 303 aa16.71■□□□□ 0.27
CACFD1-203ENST00000444798 RAPGEF4Q8WZA2 1011 aa16.71■□□□□ 0.27
CACFD1-203ENST00000444798 ADAMTS7Q9UKP4 1686 aa16.71■□□□□ 0.27
CACFD1-203ENST00000444798 ZNF316A6NFI3 1004 aaPredicted RBP16.7■□□□□ 0.26
CACFD1-203ENST00000444798 CAMKK2Q96RR4 588 aa16.7■□□□□ 0.26
CACFD1-203ENST00000444798 SIPA1L3O60292 1781 aaPredicted RBP16.69■□□□□ 0.26
CACFD1-203ENST00000444798 APBA3O96018 575 aa16.69■□□□□ 0.26
CACFD1-203ENST00000444798 PROM2Q8N271 834 aa16.68■□□□□ 0.26
CACFD1-203ENST00000444798 DIAPH1O60610 1272 aaKnown RBP16.67■□□□□ 0.26
CACFD1-203ENST00000444798 PCDH11XQ9BZA7 1347 aa16.67■□□□□ 0.26
CACFD1-203ENST00000444798 PCDH11YQ9BZA8 1340 aa16.67■□□□□ 0.26
CACFD1-203ENST00000444798 KCNQ4P56696 695 aa16.66■□□□□ 0.26
CACFD1-203ENST00000444798 BCL11BQ9C0K0 894 aaPredicted RBP16.66■□□□□ 0.26
CACFD1-203ENST00000444798 C5P01031 1676 aa16.65■□□□□ 0.26
CACFD1-203ENST00000444798 CASZ1Q86V15 1759 aa16.65■□□□□ 0.26
CACFD1-203ENST00000444798 PHKG2P15735 406 aa16.65■□□□□ 0.26
CACFD1-203ENST00000444798 BAG6P46379 1132 aa16.65■□□□□ 0.26
CACFD1-203ENST00000444798 PRIM1P49642 420 aaKnown RBP16.65■□□□□ 0.26
CACFD1-203ENST00000444798 CCDC125Q86Z20 511 aa16.65■□□□□ 0.26
CACFD1-203ENST00000444798 ANO8Q9HCE9 1232 aaPredicted RBP16.65■□□□□ 0.26
CACFD1-203ENST00000444798 U2SURPO15042 1029 aaKnown RBP16.64■□□□□ 0.25
CACFD1-203ENST00000444798 CCDC184Q52MB2 194 aa16.64■□□□□ 0.25
CACFD1-203ENST00000444798 SF3B2Q13435 895 aaKnown RBP16.63■□□□□ 0.25
CACFD1-203ENST00000444798 PSDA5PKW4 1024 aaPredicted RBP16.62■□□□□ 0.25
CACFD1-203ENST00000444798 ZNF530Q6P9A1 599 aaPredicted RBP16.62■□□□□ 0.25
CACFD1-203ENST00000444798 SYTL4Q96C24 671 aaPredicted RBP16.62■□□□□ 0.25
CACFD1-203ENST00000444798 PHACTR3Q96KR7 559 aa16.62■□□□□ 0.25
CACFD1-203ENST00000444798 RSPH6AQ9H0K4 717 aa16.62■□□□□ 0.25
CACFD1-203ENST00000444798 PRKRIP1Q9H875 184 aaPredicted RBP16.62■□□□□ 0.25
CACFD1-203ENST00000444798 TJP1Q07157 1748 aa16.62■□□□□ 0.25
CACFD1-203ENST00000444798 NKX1-1Q15270 411 aaPredicted RBP16.61■□□□□ 0.25
CACFD1-203ENST00000444798 MTHFSDQ2M296 383 aaKnown RBP16.61■□□□□ 0.25
CACFD1-203ENST00000444798 LRRC4BQ9NT99 713 aa16.61■□□□□ 0.25
CACFD1-203ENST00000444798 COL5A3P25940 1745 aaPredicted RBP16.61■□□□□ 0.25
CACFD1-203ENST00000444798 UBR2Q8IWV8 1755 aa16.61■□□□□ 0.25
CACFD1-203ENST00000444798 MRC1P22897 1456 aa16.61■□□□□ 0.25
CACFD1-203ENST00000444798 QSER1Q2KHR3 1735 aa16.59■□□□□ 0.25
CACFD1-203ENST00000444798 MYH14Q7Z406 1995 aaKnown RBP16.59■□□□□ 0.25
CACFD1-203ENST00000444798 PRKAR2BP31323 418 aa16.59■□□□□ 0.25
CACFD1-203ENST00000444798 SPG7Q9UQ90 795 aa16.59■□□□□ 0.25
CACFD1-203ENST00000444798 MYBBP1AQ9BQG0 1328 aaKnown RBP16.59■□□□□ 0.25
CACFD1-203ENST00000444798 UBR3Q6ZT12 1888 aa16.59■□□□□ 0.25
CACFD1-203ENST00000444798 TXNRD1Q16881 649 aa16.58■□□□□ 0.24
CACFD1-203ENST00000444798 MPRIPQ6WCQ1 1025 aa16.58■□□□□ 0.24
CACFD1-203ENST00000444798 PIGBQ92521 554 aa16.58■□□□□ 0.24
CACFD1-203ENST00000444798 PDGFDQ9GZP0 370 aaPredicted RBP16.58■□□□□ 0.24
CACFD1-203ENST00000444798 LGR6Q9HBX8 967 aa16.58■□□□□ 0.24
CACFD1-203ENST00000444798 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.58■□□□□ 0.24
CACFD1-203ENST00000444798 PLEKHG2Q9H7P9 1386 aa16.57■□□□□ 0.24
CACFD1-203ENST00000444798 PLSCR1O15162 318 aa16.57■□□□□ 0.24
CACFD1-203ENST00000444798 RALBP1Q15311 655 aa16.57■□□□□ 0.24
CACFD1-203ENST00000444798 IFNL2Q8IZJ0 200 aa16.57■□□□□ 0.24
CACFD1-203ENST00000444798 C4BP0C0L5 1744 aa16.56■□□□□ 0.24
CACFD1-203ENST00000444798 U2AF1L5P0DN76 240 aaPredicted RBP16.56■□□□□ 0.24
CACFD1-203ENST00000444798 U2AF1Q01081 240 aaKnown RBP eCLIP16.56■□□□□ 0.24
CACFD1-203ENST00000444798 ZNF827Q17R98 1081 aa16.56■□□□□ 0.24
CACFD1-203ENST00000444798 PLEKHO1Q53GL0 409 aaPredicted RBP16.56■□□□□ 0.24
CACFD1-203ENST00000444798 R3HDM1Q15032 1099 aaKnown RBP16.55■□□□□ 0.24
CACFD1-203ENST00000444798 CFAP53Q96M91 514 aa16.55■□□□□ 0.24
CACFD1-203ENST00000444798 ASAP1Q9ULH1 1129 aa16.55■□□□□ 0.24
CACFD1-203ENST00000444798 PALLDQ8WX93 1383 aa16.54■□□□□ 0.24
CACFD1-203ENST00000444798 SRCAPQ6ZRS2 3230 aa16.54■□□□□ 0.24
CACFD1-203ENST00000444798 SMIM5Q71RC9 77 aa16.54■□□□□ 0.24
CACFD1-203ENST00000444798 KCPQ6ZWJ8 1503 aa16.54■□□□□ 0.24
CACFD1-203ENST00000444798 CICQ96RK0 1608 aaPredicted RBP16.53■□□□□ 0.24
CACFD1-203ENST00000444798 AMIGO3Q86WK7 504 aa16.53■□□□□ 0.24
CACFD1-203ENST00000444798 SLC4A9Q96Q91 983 aa16.53■□□□□ 0.24
CACFD1-203ENST00000444798 PLEKHF1Q96S99 279 aa16.53■□□□□ 0.24
CACFD1-203ENST00000444798 ZNF831Q5JPB2 1677 aa16.53■□□□□ 0.24
CACFD1-203ENST00000444798 KDM3BQ7LBC6 1761 aa16.52■□□□□ 0.24
CACFD1-203ENST00000444798 AMOTQ4VCS5 1084 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms