RNA–Protein interactions for RNA: ENST00000443945.6

LRCH1-204, Transcript of leucine rich repeats and calponin homology domain containing 1, humanhuman

TSL 1 (best)

Gene LRCH1, Length 2,070 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1-204ENST00000443945 SHANK3Q9BYB0 1731 aa24.51■■□□□ 1.51
LRCH1-204ENST00000443945 IGSF1Q8N6C5 1336 aa24.51■■□□□ 1.51
LRCH1-204ENST00000443945 IL13P35225 146 aa24.5■■□□□ 1.51
LRCH1-204ENST00000443945 EN1Q05925 392 aaPredicted RBP24.5■■□□□ 1.51
LRCH1-204ENST00000443945 SBF2Q86WG5 1849 aa24.5■■□□□ 1.51
LRCH1-204ENST00000443945 KCNQ2O43526 872 aa24.5■■□□□ 1.51
LRCH1-204ENST00000443945 APBA3O96018 575 aa24.5■■□□□ 1.51
LRCH1-204ENST00000443945 PPP2R1AP30153 589 aa24.49■■□□□ 1.51
LRCH1-204ENST00000443945 BAG6P46379 1132 aa24.48■■□□□ 1.51
LRCH1-204ENST00000443945 KAT6BQ8WYB5 2073 aa24.47■■□□□ 1.51
LRCH1-204ENST00000443945 SULT6B1Q6IMI4 303 aa24.46■■□□□ 1.51
LRCH1-204ENST00000443945 DIAPH1O60610 1272 aaKnown RBP24.45■■□□□ 1.5
LRCH1-204ENST00000443945 COL3A1P02461 1466 aaPredicted RBP24.45■■□□□ 1.5
LRCH1-204ENST00000443945 BCL9O00512 1426 aa24.44■■□□□ 1.5
LRCH1-204ENST00000443945 CYP27B1O15528 508 aa24.44■■□□□ 1.5
LRCH1-204ENST00000443945 EZH2Q15910 746 aaKnown RBP24.44■■□□□ 1.5
LRCH1-204ENST00000443945 PARD3Q8TEW0 1356 aa24.44■■□□□ 1.5
LRCH1-204ENST00000443945 HMOX1P09601 288 aa24.44■■□□□ 1.5
LRCH1-204ENST00000443945 SRCAPQ6ZRS2 3230 aa24.43■■□□□ 1.5
LRCH1-204ENST00000443945 BCL11BQ9C0K0 894 aaPredicted RBP24.43■■□□□ 1.5
LRCH1-204ENST00000443945 PCDH11XQ9BZA7 1347 aa24.43■■□□□ 1.5
LRCH1-204ENST00000443945 PCDH11YQ9BZA8 1340 aa24.43■■□□□ 1.5
LRCH1-204ENST00000443945 PKD1L3Q7Z443 1732 aa24.42■■□□□ 1.5
LRCH1-204ENST00000443945 SYTL4Q96C24 671 aaPredicted RBP24.42■■□□□ 1.5
LRCH1-204ENST00000443945 U2SURPO15042 1029 aaKnown RBP24.41■■□□□ 1.5
LRCH1-204ENST00000443945 CAMKK2Q96RR4 588 aa24.4■■□□□ 1.5
LRCH1-204ENST00000443945 SPG7Q9UQ90 795 aa24.39■■□□□ 1.5
LRCH1-204ENST00000443945 DOT1LQ8TEK3 1739 aa24.39■■□□□ 1.5
LRCH1-204ENST00000443945 NHSQ6T4R5 1651 aa24.39■■□□□ 1.5
LRCH1-204ENST00000443945 PRIM1P49642 420 aaKnown RBP24.39■■□□□ 1.49
LRCH1-204ENST00000443945 KDRP35968 1356 aa24.38■■□□□ 1.49
LRCH1-204ENST00000443945 CFAP53Q96M91 514 aa24.37■■□□□ 1.49
LRCH1-204ENST00000443945 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.34■■□□□ 1.492e-6■■■□□ 15.6
LRCH1-204ENST00000443945 BTAF1O14981 1849 aa24.34■■□□□ 1.49
LRCH1-204ENST00000443945 PHKG2P15735 406 aa24.34■■□□□ 1.49
LRCH1-204ENST00000443945 PLEKHO1Q53GL0 409 aaPredicted RBP24.33■■□□□ 1.48
LRCH1-204ENST00000443945 ZNF530Q6P9A1 599 aaPredicted RBP24.33■■□□□ 1.48
LRCH1-204ENST00000443945 TOGARAM1Q9Y4F4 1720 aa24.33■■□□□ 1.48
LRCH1-204ENST00000443945 IFNL2Q8IZJ0 200 aa24.32■■□□□ 1.48
LRCH1-204ENST00000443945 RALBP1Q15311 655 aa24.31■■□□□ 1.48
LRCH1-204ENST00000443945 PROM2Q8N271 834 aa24.31■■□□□ 1.48
LRCH1-204ENST00000443945 PLSCR1O15162 318 aa24.31■■□□□ 1.48
LRCH1-204ENST00000443945 MPRIPQ6WCQ1 1025 aa24.3■■□□□ 1.48
LRCH1-204ENST00000443945 RREB1Q92766 1687 aa24.29■■□□□ 1.48
LRCH1-204ENST00000443945 U2AF1L5P0DN76 240 aaPredicted RBP24.28■■□□□ 1.48
LRCH1-204ENST00000443945 U2AF1Q01081 240 aaKnown RBP eCLIP24.28■■□□□ 1.48
LRCH1-204ENST00000443945 NKX1-1Q15270 411 aaPredicted RBP24.28■■□□□ 1.48
LRCH1-204ENST00000443945 AMOTQ4VCS5 1084 aa24.28■■□□□ 1.48
LRCH1-204ENST00000443945 PSDA5PKW4 1024 aaPredicted RBP24.28■■□□□ 1.48
LRCH1-204ENST00000443945 TXNRD1Q16881 649 aa24.27■■□□□ 1.48
LRCH1-204ENST00000443945 PRKRIP1Q9H875 184 aaPredicted RBP24.27■■□□□ 1.48
LRCH1-204ENST00000443945 NUDCQ9Y266 331 aa24.27■■□□□ 1.48
LRCH1-204ENST00000443945 NUP188Q5SRE5 1749 aa24.27■■□□□ 1.48
LRCH1-204ENST00000443945 KCNQ4P56696 695 aa24.26■■□□□ 1.47
LRCH1-204ENST00000443945 MTHFSDQ2M296 383 aaKnown RBP24.26■■□□□ 1.47
LRCH1-204ENST00000443945 MYBBP1AQ9BQG0 1328 aaKnown RBP24.25■■□□□ 1.47
LRCH1-204ENST00000443945 ITGB4P16144 1822 aa24.25■■□□□ 1.47
LRCH1-204ENST00000443945 PLEKHG2Q9H7P9 1386 aa24.25■■□□□ 1.47
LRCH1-204ENST00000443945 PRKAR2BP31323 418 aa24.25■■□□□ 1.47
LRCH1-204ENST00000443945 C1orf141Q5JVX7 400 aa24.25■■□□□ 1.47
LRCH1-204ENST00000443945 RSPH6AQ9H0K4 717 aa24.25■■□□□ 1.47
LRCH1-204ENST00000443945 KDM6AO15550 1401 aaPredicted RBP24.25■■□□□ 1.47
LRCH1-204ENST00000443945 RGPD3A6NKT7 1758 aaPredicted RBP24.24■■□□□ 1.47
LRCH1-204ENST00000443945 RGPD4Q7Z3J3 1758 aa24.24■■□□□ 1.47
LRCH1-204ENST00000443945 R3HDM1Q15032 1099 aaKnown RBP24.23■■□□□ 1.47
LRCH1-204ENST00000443945 PIGBQ92521 554 aa24.23■■□□□ 1.47
LRCH1-204ENST00000443945 PHACTR3Q96KR7 559 aa24.23■■□□□ 1.47
LRCH1-204ENST00000443945 ANO8Q9HCE9 1232 aaPredicted RBP24.22■■□□□ 1.47
LRCH1-204ENST00000443945 LRRC4BQ9NT99 713 aa24.22■■□□□ 1.47
LRCH1-204ENST00000443945 DCAF5Q96JK2 942 aa24.21■■□□□ 1.47
LRCH1-204ENST00000443945 TMOD3Q9NYL9 352 aa24.2■■□□□ 1.47
LRCH1-204ENST00000443945 LGR6Q9HBX8 967 aa24.19■■□□□ 1.46
LRCH1-204ENST00000443945 HSP90AB1P08238 724 aaKnown RBP24.19■■□□□ 1.46
LRCH1-204ENST00000443945 AKAP4Q5JQC9 854 aa24.19■■□□□ 1.46
LRCH1-204ENST00000443945 ASAP1Q9ULH1 1129 aa24.17■■□□□ 1.46
LRCH1-204ENST00000443945 PALLDQ8WX93 1383 aa24.16■■□□□ 1.46
LRCH1-204ENST00000443945 FCHSD2O94868 740 aa24.16■■□□□ 1.46
LRCH1-204ENST00000443945 NBPF14Q5TI25 921 aa24.16■■□□□ 1.46
LRCH1-204ENST00000443945 CABP4P57796 275 aa24.15■■□□□ 1.46
LRCH1-204ENST00000443945 ERVV-2B6SEH9 535 aa24.15■■□□□ 1.46
LRCH1-204ENST00000443945 NFATC2IPQ8NCF5 419 aa24.15■■□□□ 1.46
LRCH1-204ENST00000443945 LY75O60449 1722 aa24.15■■□□□ 1.46
LRCH1-204ENST00000443945 CCNL1Q9UK58 526 aaPredicted RBP24.14■■□□□ 1.46
LRCH1-204ENST00000443945 GAS2L2Q8NHY3 880 aa24.13■■□□□ 1.45
LRCH1-204ENST00000443945 SCN11AQ9UI33 1791 aa24.13■■□□□ 1.45
LRCH1-204ENST00000443945 RNMTO43148 476 aaKnown RBP24.12■■□□□ 1.45
LRCH1-204ENST00000443945 ANP32CO43423 234 aa24.12■■□□□ 1.45
LRCH1-204ENST00000443945 ATG3Q9NT62 314 aa24.12■■□□□ 1.45
LRCH1-204ENST00000443945 ZNF827Q17R98 1081 aa24.12■■□□□ 1.45
LRCH1-204ENST00000443945 CCDC184Q52MB2 194 aa24.11■■□□□ 1.45
LRCH1-204ENST00000443945 PDGFDQ9GZP0 370 aaPredicted RBP24.11■■□□□ 1.45
LRCH1-204ENST00000443945 VIRMAQ69YN4 1812 aaKnown RBP24.11■■□□□ 1.45
LRCH1-204ENST00000443945 MAP3K5Q99683 1374 aa24.11■■□□□ 1.45
LRCH1-204ENST00000443945 PAPPAQ13219 1627 aa24.11■■□□□ 1.45
LRCH1-204ENST00000443945 SLC27A3Q5K4L6 730 aa24.11■■□□□ 1.45
LRCH1-204ENST00000443945 GNAT3A8MTJ3 354 aa24.1■■□□□ 1.45
LRCH1-204ENST00000443945 SLC15A2Q16348 729 aa24.09■■□□□ 1.45
LRCH1-204ENST00000443945 IL17REQ8NFR9 667 aa24.09■■□□□ 1.45
LRCH1-204ENST00000443945 SMARCC1Q92922 1105 aaPredicted RBP24.09■■□□□ 1.45
LRCH1-204ENST00000443945 PLEKHF1Q96S99 279 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms