RNA–Protein interactions for RNA: ENST00000442742.6

CASK-208, Transcript of calcium/calmodulin dependent serine protein kinase, humanhuman

TSL 1 (best) BASIC

Gene CASK, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASK-208ENST00000442742 IL17REQ8NFR9 667 aa11.98□□□□□ -0.49
CASK-208ENST00000442742 GAS2L2Q8NHY3 880 aa11.98□□□□□ -0.49
CASK-208ENST00000442742 ZNF335Q9H4Z2 1342 aaPredicted RBP11.98□□□□□ -0.49
CASK-208ENST00000442742 C1orf167Q5SNV9 1468 aa11.98□□□□□ -0.49
CASK-208ENST00000442742 SLC4A2P04920 1241 aa11.98□□□□□ -0.49
CASK-208ENST00000442742 MS4A1P11836 297 aa11.98□□□□□ -0.49
CASK-208ENST00000442742 LGR6Q9HBX8 967 aa11.98□□□□□ -0.49
CASK-208ENST00000442742 ANP32AP39687 249 aaKnown RBP11.97□□□□□ -0.49
CASK-208ENST00000442742 RWDD1Q9H446 243 aaPredicted RBP11.97□□□□□ -0.49
CASK-208ENST00000442742 LTN1O94822 1766 aa11.97□□□□□ -0.49
CASK-208ENST00000442742 MPRIPQ6WCQ1 1025 aa11.97□□□□□ -0.49
CASK-208ENST00000442742 ANKRD24Q8TF21 1146 aa11.97□□□□□ -0.49
CASK-208ENST00000442742 PDZRN3Q9UPQ7 1066 aa11.97□□□□□ -0.49
CASK-208ENST00000442742 MARF1Q9Y4F3 1742 aaKnown RBP11.97□□□□□ -0.49
CASK-208ENST00000442742 KDRP35968 1356 aa11.97□□□□□ -0.49
CASK-208ENST00000442742 SLC4A10Q6U841 1118 aa11.96□□□□□ -0.49
CASK-208ENST00000442742 ARHGEF25Q86VW2 580 aa11.96□□□□□ -0.49
CASK-208ENST00000442742 ERICH6Q7L0X2 663 aa11.96□□□□□ -0.49
CASK-208ENST00000442742 F6X3S4 739 aa11.96□□□□□ -0.5
CASK-208ENST00000442742 ZBTB40Q9NUA8 1239 aa11.96□□□□□ -0.5
CASK-208ENST00000442742 NLRP2Q9NX02 1062 aa11.96□□□□□ -0.5
CASK-208ENST00000442742 STRCP1A6NGW2 1772 aa11.95□□□□□ -0.5
CASK-208ENST00000442742 G2E3Q7L622 706 aa11.95□□□□□ -0.5
CASK-208ENST00000442742 CADPS2Q86UW7 1296 aa11.95□□□□□ -0.5
CASK-208ENST00000442742 RGPD1P0DJD0 1748 aa11.95□□□□□ -0.5
CASK-208ENST00000442742 CSB-PGBD3P0DP91 1061 aa11.95□□□□□ -0.5
CASK-208ENST00000442742 RGPD2P0DJD1 1756 aa11.95□□□□□ -0.5
CASK-208ENST00000442742 EIF2S2P20042 333 aaKnown RBP11.94□□□□□ -0.5
CASK-208ENST00000442742 ZNF530Q6P9A1 599 aaPredicted RBP11.94□□□□□ -0.5
CASK-208ENST00000442742 CRB1P82279 1406 aa11.94□□□□□ -0.5
CASK-208ENST00000442742 ZBTB7BO15156 539 aaPredicted RBP11.93□□□□□ -0.5
CASK-208ENST00000442742 ZNF428Q96B54 188 aa11.93□□□□□ -0.5
CASK-208ENST00000442742 MSH6P52701 1360 aa11.93□□□□□ -0.5
CASK-208ENST00000442742 C8orf34Q49A92 452 aa11.93□□□□□ -0.5
CASK-208ENST00000442742 APBB1O00213 710 aa11.92□□□□□ -0.5
CASK-208ENST00000442742 KCNQ3O43525 872 aa11.92□□□□□ -0.5
CASK-208ENST00000442742 HAP1P54257 671 aaPredicted RBP11.92□□□□□ -0.5
CASK-208ENST00000442742 FAM161AQ3B820 660 aa11.92□□□□□ -0.5
CASK-208ENST00000442742 LNPKQ9C0E8 428 aa11.92□□□□□ -0.5
CASK-208ENST00000442742 MAP3K5Q99683 1374 aa11.92□□□□□ -0.5
CASK-208ENST00000442742 MST1RQ04912 1400 aa11.92□□□□□ -0.5
CASK-208ENST00000442742 TAF7Q15545 349 aaPredicted RBP11.92□□□□□ -0.5
CASK-208ENST00000442742 NFAT5O94916 1531 aa11.91□□□□□ -0.5
CASK-208ENST00000442742 NWD1Q149M9 1564 aa11.91□□□□□ -0.5
CASK-208ENST00000442742 SEC24BO95487 1268 aa11.91□□□□□ -0.5
CASK-208ENST00000442742 ANXA1P04083 346 aa11.91□□□□□ -0.5
CASK-208ENST00000442742 SLC4A3P48751 1232 aa11.91□□□□□ -0.5
CASK-208ENST00000442742 TEFQ10587 303 aa11.91□□□□□ -0.5
CASK-208ENST00000442742 BRINP3Q76B58 766 aa11.91□□□□□ -0.5
CASK-208ENST00000442742 NPHP3Q7Z494 1330 aa11.9□□□□□ -0.5
CASK-208ENST00000442742 C1orf141Q5JVX7 400 aa11.9□□□□□ -0.5
CASK-208ENST00000442742 STK31Q9BXU1 1019 aa11.9□□□□□ -0.5
CASK-208ENST00000442742 API5Q9BZZ5 524 aaKnown RBP11.9□□□□□ -0.5
CASK-208ENST00000442742 SLAIN2Q9P270 581 aa11.9□□□□□ -0.5
CASK-208ENST00000442742 FKBP5Q13451 457 aaPredicted RBP11.9□□□□□ -0.5
CASK-208ENST00000442742 ARHGAP45Q92619 1136 aa11.9□□□□□ -0.5
CASK-208ENST00000442742 RGPD5Q99666 1765 aa11.89□□□□□ -0.51
CASK-208ENST00000442742 KIF24Q5T7B8 1368 aa11.89□□□□□ -0.51
CASK-208ENST00000442742 PLEKHO1Q53GL0 409 aaPredicted RBP11.89□□□□□ -0.51
CASK-208ENST00000442742 ANKRD45Q5TZF3 282 aa11.89□□□□□ -0.51
CASK-208ENST00000442742 IPO9Q96P70 1041 aaKnown RBP11.89□□□□□ -0.51
CASK-208ENST00000442742 RTL1A6NKG5 1358 aa11.89□□□□□ -0.51
CASK-208ENST00000442742 BRPF1P55201 1214 aaPredicted RBP11.89□□□□□ -0.51
CASK-208ENST00000442742 AAMPQ13685 434 aa11.89□□□□□ -0.51
CASK-208ENST00000442742 ABCC4O15439 1325 aa11.89□□□□□ -0.51
CASK-208ENST00000442742 SIRT2Q8IXJ6 389 aa11.88□□□□□ -0.51
CASK-208ENST00000442742 MEIS3Q99687 375 aa11.88□□□□□ -0.51
CASK-208ENST00000442742 USP35Q9P2H5 1018 aa11.88□□□□□ -0.51
CASK-208ENST00000442742 ZBTB47Q9UFB7 747 aaPredicted RBP11.88□□□□□ -0.51
CASK-208ENST00000442742 ERBB3P21860 1342 aa11.88□□□□□ -0.51
CASK-208ENST00000442742 LMTK3Q96Q04 1460 aa11.88□□□□□ -0.51
CASK-208ENST00000442742 BTBD11A6QL63 1104 aa11.88□□□□□ -0.51
CASK-208ENST00000442742 RAPGEF4Q8WZA2 1011 aa11.88□□□□□ -0.51
CASK-208ENST00000442742 PHAXQ9H814 394 aaKnown RBP11.88□□□□□ -0.51
CASK-208ENST00000442742 HDGFL1Q5TGJ6 251 aa11.87□□□□□ -0.51
CASK-208ENST00000442742 USP19O94966 1318 aa11.87□□□□□ -0.51
CASK-208ENST00000442742 PRAMEF22A3QJZ6 481 aa11.87□□□□□ -0.51
CASK-208ENST00000442742 HDAC1Q13547 482 aaPredicted RBP11.87□□□□□ -0.51
CASK-208ENST00000442742 KIAA0232Q92628 1395 aa11.87□□□□□ -0.51
CASK-208ENST00000442742 HTATSF1O43719 755 aaKnown RBP11.87□□□□□ -0.51
CASK-208ENST00000442742 NOP58Q9Y2X3 529 aaKnown RBP11.87□□□□□ -0.51
CASK-208ENST00000442742 SLC39A6Q13433 755 aa11.86□□□□□ -0.51
CASK-208ENST00000442742 CCDC30Q5VVM6 783 aa11.86□□□□□ -0.51
CASK-208ENST00000442742 FLIIQ13045 1269 aa11.86□□□□□ -0.51
CASK-208ENST00000442742 AKAP4Q5JQC9 854 aa11.86□□□□□ -0.51
CASK-208ENST00000442742 PRDM11Q9NQV5 511 aa11.86□□□□□ -0.51
CASK-208ENST00000442742 STRN4Q9NRL3 753 aa11.86□□□□□ -0.51
CASK-208ENST00000442742 PXDNQ92626 1479 aa11.85□□□□□ -0.51
CASK-208ENST00000442742 SPATA31A3Q5VYP0 1347 aa11.85□□□□□ -0.51
CASK-208ENST00000442742 KAT6BQ8WYB5 2073 aa11.85□□□□□ -0.51
CASK-208ENST00000442742 MED1Q15648 1581 aaPredicted RBP11.85□□□□□ -0.51
CASK-208ENST00000442742 RNMTO43148 476 aaKnown RBP11.85□□□□□ -0.51
CASK-208ENST00000442742 SMC5Q8IY18 1101 aa11.84□□□□□ -0.51
CASK-208ENST00000442742 STRCQ7RTU9 1775 aa11.84□□□□□ -0.51
CASK-208ENST00000442742 TRPM3Q9HCF6 1732 aaPredicted RBP11.84□□□□□ -0.51
CASK-208ENST00000442742 NBR1Q14596 966 aa11.84□□□□□ -0.51
CASK-208ENST00000442742 AMOTQ4VCS5 1084 aa11.84□□□□□ -0.51
CASK-208ENST00000442742 INTS3Q68E01 1043 aaKnown RBP11.84□□□□□ -0.51
CASK-208ENST00000442742 ANP32EQ9BTT0 268 aa11.84□□□□□ -0.51
CASK-208ENST00000442742 CHPF2Q9P2E5 772 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms