RNA–Protein interactions for RNA: ENST00000442677.3

CDH23-207, Transcript of cadherin related 23, humanhuman

TSL 5

Gene CDH23, Length 7,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-207ENST00000442677 CCDC88BA6NC98 1476 aa18.34■□□□□ 0.53
CDH23-207ENST00000442677 ZSCAN12O43309 604 aa18.34■□□□□ 0.53
CDH23-207ENST00000442677 SOGA3Q5TF21 947 aa18.34■□□□□ 0.53
CDH23-207ENST00000442677 CHD1LQ86WJ1 897 aa18.34■□□□□ 0.53
CDH23-207ENST00000442677 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.34■□□□□ 0.53
CDH23-207ENST00000442677 TWISTNBQ3B726 338 aaPredicted RBP18.34■□□□□ 0.53
CDH23-207ENST00000442677 CABP2Q9NPB3 220 aa18.34■□□□□ 0.53
CDH23-207ENST00000442677 GSTTP1A0A1W2PQM5 241 aa18.33■□□□□ 0.53
CDH23-207ENST00000442677 CTR9Q6PD62 1173 aa18.33■□□□□ 0.53
CDH23-207ENST00000442677 ANAPC15P60006 121 aa18.33■□□□□ 0.53
CDH23-207ENST00000442677 MNAT1P51948 309 aa18.33■□□□□ 0.52
CDH23-207ENST00000442677 IMMTQ16891 758 aaKnown RBP18.33■□□□□ 0.52
CDH23-207ENST00000442677 PDS5BQ9NTI5 1447 aa18.32■□□□□ 0.52
CDH23-207ENST00000442677 ATP2C2O75185 946 aa18.32■□□□□ 0.52
CDH23-207ENST00000442677 CASTP20810 708 aaKnown RBP18.32■□□□□ 0.52
CDH23-207ENST00000442677 FKBP4Q02790 459 aaKnown RBP eCLIP18.32■□□□□ 0.52
CDH23-207ENST00000442677 KIF6Q6ZMV9 814 aa18.32■□□□□ 0.52
CDH23-207ENST00000442677 PUS7Q96PZ0 661 aaKnown RBP18.32■□□□□ 0.52
CDH23-207ENST00000442677 CTNNBL1Q8WYA6 563 aaPredicted RBP18.32■□□□□ 0.52
CDH23-207ENST00000442677 CCDC175P0C221 793 aa18.32■□□□□ 0.52
CDH23-207ENST00000442677 KIF2AO00139 706 aaPredicted RBP18.32■□□□□ 0.52
CDH23-207ENST00000442677 CCDC57Q2TAC2 916 aa18.32■□□□□ 0.52
CDH23-207ENST00000442677 FERMT3Q86UX7 667 aa18.32■□□□□ 0.52
CDH23-207ENST00000442677 MCM3P25205 808 aa18.31■□□□□ 0.52
CDH23-207ENST00000442677 SMARCC1Q92922 1105 aaPredicted RBP18.31■□□□□ 0.52
CDH23-207ENST00000442677 FAM107BQ9H098 131 aa18.31■□□□□ 0.52
CDH23-207ENST00000442677 BMP2KQ9NSY1 1161 aaPredicted RBP18.31■□□□□ 0.52
CDH23-207ENST00000442677 CPLX3Q8WVH0 158 aa18.31■□□□□ 0.52
CDH23-207ENST00000442677 GCOM1H8Y6P7 765 aaPredicted RBP18.31■□□□□ 0.52
CDH23-207ENST00000442677 MYZAPP0CAP1 466 aa18.31■□□□□ 0.52
CDH23-207ENST00000442677 TOP1P11387 765 aaKnown RBP18.31■□□□□ 0.52
CDH23-207ENST00000442677 BRD4O60885 1362 aaPredicted RBP18.31■□□□□ 0.52
CDH23-207ENST00000442677 SLC4A2P04920 1241 aa18.31■□□□□ 0.52
CDH23-207ENST00000442677 SPECC1Q5M775 1068 aa18.31■□□□□ 0.52
CDH23-207ENST00000442677 SMC1AQ14683 1233 aaKnown RBP18.3■□□□□ 0.52
CDH23-207ENST00000442677 CCDC183Q5T5S1 534 aa18.3■□□□□ 0.52
CDH23-207ENST00000442677 SPINK5Q9NQ38 1064 aaPredicted RBP18.3■□□□□ 0.52
CDH23-207ENST00000442677 CCDC83Q8IWF9 413 aa18.3■□□□□ 0.52
CDH23-207ENST00000442677 USP25Q9UHP3 1055 aa18.3■□□□□ 0.52
CDH23-207ENST00000442677 DNAAF4Q8WXU2 420 aa18.29■□□□□ 0.52
CDH23-207ENST00000442677 NLRP2Q9NX02 1062 aa18.29■□□□□ 0.52
CDH23-207ENST00000442677 CIZ1Q9ULV3 898 aaPredicted RBP18.29■□□□□ 0.52
CDH23-207ENST00000442677 HLTFQ14527 1009 aaKnown RBP eCLIP18.29■□□□□ 0.52
CDH23-207ENST00000442677 DESP17661 470 aa18.29■□□□□ 0.52
CDH23-207ENST00000442677 PDE3AQ14432 1141 aa18.29■□□□□ 0.52
CDH23-207ENST00000442677 AACSQ86V21 672 aa18.29■□□□□ 0.52
CDH23-207ENST00000442677 TIGD1Q96MW7 591 aa18.29■□□□□ 0.52
CDH23-207ENST00000442677 CDKL5O76039 1030 aa18.28■□□□□ 0.52
CDH23-207ENST00000442677 CACNA2D4Q7Z3S7 1137 aa18.28■□□□□ 0.52
CDH23-207ENST00000442677 PPP6R1Q9UPN7 881 aa18.28■□□□□ 0.52
CDH23-207ENST00000442677 NACAP1Q9BZK3 213 aa18.28■□□□□ 0.52
CDH23-207ENST00000442677 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.28■□□□□ 0.52
CDH23-207ENST00000442677 TMCO5BA8MYB1 307 aa18.28■□□□□ 0.52
CDH23-207ENST00000442677 PRKAR2BP31323 418 aa18.28■□□□□ 0.52
CDH23-207ENST00000442677 PPM1EQ8WY54 764 aa18.28■□□□□ 0.52
CDH23-207ENST00000442677 NUP88Q99567 741 aaPredicted RBP18.27■□□□□ 0.52
CDH23-207ENST00000442677 ZSCAN31Q96LW9 406 aaPredicted RBP18.27■□□□□ 0.52
CDH23-207ENST00000442677 MACROD2A1Z1Q3 448 aa18.27■□□□□ 0.51
CDH23-207ENST00000442677 MAATS1Q7Z4T9 603 aa18.27■□□□□ 0.51
CDH23-207ENST00000442677 SPATA24Q86W54 205 aa18.27■□□□□ 0.51
CDH23-207ENST00000442677 USP5P45974 858 aa18.27■□□□□ 0.51
CDH23-207ENST00000442677 ZNF76P36508 570 aa18.26■□□□□ 0.51
CDH23-207ENST00000442677 CKAP2LQ8IYA6 745 aa18.26■□□□□ 0.51
CDH23-207ENST00000442677 WASHC2AQ641Q2 1341 aa18.26■□□□□ 0.51
CDH23-207ENST00000442677 C11orf95C9JLR9 678 aaPredicted RBP18.26■□□□□ 0.51
CDH23-207ENST00000442677 ZSWIM4Q9H7M6 989 aa18.26■□□□□ 0.51
CDH23-207ENST00000442677 ANO10Q9NW15 660 aa18.26■□□□□ 0.51
CDH23-207ENST00000442677 GUCY1B3Q02153 619 aa18.26■□□□□ 0.51
CDH23-207ENST00000442677 LIG1P18858 919 aa18.26■□□□□ 0.51
CDH23-207ENST00000442677 TDO2P48775 406 aa18.26■□□□□ 0.51
CDH23-207ENST00000442677 BBXQ8WY36 941 aaPredicted RBP18.25■□□□□ 0.51
CDH23-207ENST00000442677 PAFAH1B1P43034 410 aa18.25■□□□□ 0.51
CDH23-207ENST00000442677 ZBTB9Q96C00 473 aa18.25■□□□□ 0.51
CDH23-207ENST00000442677 UBE2Q2Q8WVN8 375 aa18.25■□□□□ 0.51
CDH23-207ENST00000442677 IL1RAPL2Q9NP60 686 aa18.25■□□□□ 0.51
CDH23-207ENST00000442677 CETN2P41208 172 aa18.25■□□□□ 0.51
CDH23-207ENST00000442677 FKBP15Q5T1M5 1219 aa18.25■□□□□ 0.51
CDH23-207ENST00000442677 UBAC1Q9BSL1 405 aa18.25■□□□□ 0.51
CDH23-207ENST00000442677 RBM42Q9BTD8 480 aaKnown RBP18.25■□□□□ 0.51
CDH23-207ENST00000442677 MYL6BP14649 208 aa18.24■□□□□ 0.51
CDH23-207ENST00000442677 GNL3LQ9NVN8 582 aaKnown RBP18.24■□□□□ 0.51
CDH23-207ENST00000442677 PPP2R1AP30153 589 aa18.24■□□□□ 0.51
CDH23-207ENST00000442677 LARP1Q6PKG0 1096 aaKnown RBP18.24■□□□□ 0.51
CDH23-207ENST00000442677 CEP131Q9UPN4 1083 aa18.24■□□□□ 0.51
CDH23-207ENST00000442677 MVPQ14764 893 aaKnown RBP18.24■□□□□ 0.51
CDH23-207ENST00000442677 GIGYF2Q6Y7W6 1299 aaKnown RBP18.24■□□□□ 0.51
CDH23-207ENST00000442677 TMC6Q7Z403 805 aa18.24■□□□□ 0.51
CDH23-207ENST00000442677 POTEJP0CG39 1038 aa18.23■□□□□ 0.51
CDH23-207ENST00000442677 CCDC160A6NGH7 325 aa18.23■□□□□ 0.51
CDH23-207ENST00000442677 DDX54Q8TDD1 881 aaKnown RBP18.23■□□□□ 0.51
CDH23-207ENST00000442677 ADCY5O95622 1261 aa18.23■□□□□ 0.51
CDH23-207ENST00000442677 UBA5Q9GZZ9 404 aa18.23■□□□□ 0.51
CDH23-207ENST00000442677 SSFA2P28290 1259 aa18.22■□□□□ 0.51
CDH23-207ENST00000442677 CCT4P50991 539 aaKnown RBP18.22■□□□□ 0.51
CDH23-207ENST00000442677 CEP135Q66GS9 1140 aa18.22■□□□□ 0.51
CDH23-207ENST00000442677 TDRD12Q587J7 1177 aaKnown RBP18.22■□□□□ 0.51
CDH23-207ENST00000442677 SKAP1Q86WV1 359 aa18.22■□□□□ 0.51
CDH23-207ENST00000442677 MIA2Q96PC5 1412 aa18.22■□□□□ 0.51
CDH23-207ENST00000442677 PSMD1Q99460 953 aa18.22■□□□□ 0.51
CDH23-207ENST00000442677 MPHOSPH10O00566 681 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms