RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 CNGB1Q14028 1251 aaPredicted RBP20.31■□□□□ 0.84
CSNK1E-210ENST00000442216 PARD3Q8TEW0 1356 aa20.31■□□□□ 0.84
CSNK1E-210ENST00000442216 NHSQ6T4R5 1651 aa20.29■□□□□ 0.84
CSNK1E-210ENST00000442216 ZNF316A6NFI3 1004 aaPredicted RBP20.29■□□□□ 0.84
CSNK1E-210ENST00000442216 TRIM37O94972 964 aa20.29■□□□□ 0.84
CSNK1E-210ENST00000442216 PPP2R1AP30153 589 aa20.29■□□□□ 0.84
CSNK1E-210ENST00000442216 BAG6P46379 1132 aa20.29■□□□□ 0.84
CSNK1E-210ENST00000442216 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.29■□□□□ 0.84
CSNK1E-210ENST00000442216 COL3A1P02461 1466 aaPredicted RBP20.29■□□□□ 0.84
CSNK1E-210ENST00000442216 DIAPH1O60610 1272 aaKnown RBP20.28■□□□□ 0.84
CSNK1E-210ENST00000442216 RGPD3A6NKT7 1758 aaPredicted RBP20.28■□□□□ 0.84
CSNK1E-210ENST00000442216 RGPD4Q7Z3J3 1758 aa20.28■□□□□ 0.84
CSNK1E-210ENST00000442216 PCDH11XQ9BZA7 1347 aa20.27■□□□□ 0.84
CSNK1E-210ENST00000442216 PCDH11YQ9BZA8 1340 aa20.27■□□□□ 0.84
CSNK1E-210ENST00000442216 KDRP35968 1356 aa20.27■□□□□ 0.84
CSNK1E-210ENST00000442216 RALBP1Q15311 655 aa20.27■□□□□ 0.84
CSNK1E-210ENST00000442216 CFAP53Q96M91 514 aa20.27■□□□□ 0.84
CSNK1E-210ENST00000442216 DDX54Q8TDD1 881 aaKnown RBP20.26■□□□□ 0.83
CSNK1E-210ENST00000442216 BCL11BQ9C0K0 894 aaPredicted RBP20.26■□□□□ 0.83
CSNK1E-210ENST00000442216 SPG7Q9UQ90 795 aa20.26■□□□□ 0.83
CSNK1E-210ENST00000442216 DOT1LQ8TEK3 1739 aa20.24■□□□□ 0.83
CSNK1E-210ENST00000442216 SULT6B1Q6IMI4 303 aa20.23■□□□□ 0.83
CSNK1E-210ENST00000442216 DEFB132Q7Z7B7 95 aa20.23■□□□□ 0.83
CSNK1E-210ENST00000442216 APBA3O96018 575 aa20.22■□□□□ 0.83
CSNK1E-210ENST00000442216 BTAF1O14981 1849 aa20.22■□□□□ 0.83
CSNK1E-210ENST00000442216 PLSCR1O15162 318 aa20.21■□□□□ 0.83
CSNK1E-210ENST00000442216 AMOTQ4VCS5 1084 aa20.21■□□□□ 0.83
CSNK1E-210ENST00000442216 RREB1Q92766 1687 aa20.21■□□□□ 0.83
CSNK1E-210ENST00000442216 CYP27B1O15528 508 aa20.2■□□□□ 0.82
CSNK1E-210ENST00000442216 EN1Q05925 392 aaPredicted RBP20.2■□□□□ 0.82
CSNK1E-210ENST00000442216 NKX1-1Q15270 411 aaPredicted RBP20.2■□□□□ 0.82
CSNK1E-210ENST00000442216 PLEKHO1Q53GL0 409 aaPredicted RBP20.2■□□□□ 0.82
CSNK1E-210ENST00000442216 AEBP1Q8IUX7 1158 aa20.2■□□□□ 0.82
CSNK1E-210ENST00000442216 ITGB4P16144 1822 aa20.2■□□□□ 0.82
CSNK1E-210ENST00000442216 IFNL2Q8IZJ0 200 aa20.19■□□□□ 0.82
CSNK1E-210ENST00000442216 CAMKK2Q96RR4 588 aa20.19■□□□□ 0.82
CSNK1E-210ENST00000442216 NUDCQ9Y266 331 aa20.19■□□□□ 0.82
CSNK1E-210ENST00000442216 ACSBG1Q96GR2 724 aa20.18■□□□□ 0.82
CSNK1E-210ENST00000442216 TOGARAM1Q9Y4F4 1720 aa20.17■□□□□ 0.82
CSNK1E-210ENST00000442216 KCNQ2O43526 872 aa20.17■□□□□ 0.82
CSNK1E-210ENST00000442216 U2SURPO15042 1029 aaKnown RBP20.16■□□□□ 0.82
CSNK1E-210ENST00000442216 PHKG2P15735 406 aa20.16■□□□□ 0.82
CSNK1E-210ENST00000442216 PTF1AQ7RTS3 328 aa20.16■□□□□ 0.82
CSNK1E-210ENST00000442216 MYBBP1AQ9BQG0 1328 aaKnown RBP20.16■□□□□ 0.82
CSNK1E-210ENST00000442216 HMOX1P09601 288 aa20.15■□□□□ 0.82
CSNK1E-210ENST00000442216 EZH2Q15910 746 aaKnown RBP20.15■□□□□ 0.82
CSNK1E-210ENST00000442216 NUP188Q5SRE5 1749 aa20.15■□□□□ 0.82
CSNK1E-210ENST00000442216 VIRMAQ69YN4 1812 aaKnown RBP20.15■□□□□ 0.82
CSNK1E-210ENST00000442216 HSP90AB1P08238 724 aaKnown RBP20.14■□□□□ 0.81
CSNK1E-210ENST00000442216 PRKRIP1Q9H875 184 aaPredicted RBP20.14■□□□□ 0.81
CSNK1E-210ENST00000442216 PRIM1P49642 420 aaKnown RBP20.13■□□□□ 0.81
CSNK1E-210ENST00000442216 SCN11AQ9UI33 1791 aa20.13■□□□□ 0.81
CSNK1E-210ENST00000442216 LY75O60449 1722 aa20.13■□□□□ 0.81
CSNK1E-210ENST00000442216 ZNF530Q6P9A1 599 aaPredicted RBP20.12■□□□□ 0.81
CSNK1E-210ENST00000442216 C1orf141Q5JVX7 400 aa20.11■□□□□ 0.81
CSNK1E-210ENST00000442216 SYTL4Q96C24 671 aaPredicted RBP20.11■□□□□ 0.81
CSNK1E-210ENST00000442216 DCAF5Q96JK2 942 aa20.11■□□□□ 0.81
CSNK1E-210ENST00000442216 FCHSD2O94868 740 aa20.1■□□□□ 0.81
CSNK1E-210ENST00000442216 U2AF1L5P0DN76 240 aaPredicted RBP20.09■□□□□ 0.81
CSNK1E-210ENST00000442216 U2AF1Q01081 240 aaKnown RBP eCLIP20.09■□□□□ 0.81
CSNK1E-210ENST00000442216 AKAP4Q5JQC9 854 aa20.09■□□□□ 0.81
CSNK1E-210ENST00000442216 RSPH6AQ9H0K4 717 aa20.09■□□□□ 0.81
CSNK1E-210ENST00000442216 ERVV-2B6SEH9 535 aa20.08■□□□□ 0.81
CSNK1E-210ENST00000442216 ADAMTS7Q9UKP4 1686 aa20.07■□□□□ 0.8
CSNK1E-210ENST00000442216 TXNRD1Q16881 649 aa20.07■□□□□ 0.8
CSNK1E-210ENST00000442216 PROM2Q8N271 834 aa20.07■□□□□ 0.8
CSNK1E-210ENST00000442216 KDM6AO15550 1401 aaPredicted RBP20.06■□□□□ 0.8
CSNK1E-210ENST00000442216 MTHFSDQ2M296 383 aaKnown RBP20.06■□□□□ 0.8
CSNK1E-210ENST00000442216 GAS2L2Q8NHY3 880 aa20.06■□□□□ 0.8
CSNK1E-210ENST00000442216 PRKAR2BP31323 418 aa20.05■□□□□ 0.8
CSNK1E-210ENST00000442216 MPRIPQ6WCQ1 1025 aa20.05■□□□□ 0.8
CSNK1E-210ENST00000442216 SLC27A3Q5K4L6 730 aa20.04■□□□□ 0.8
CSNK1E-210ENST00000442216 NBPF14Q5TI25 921 aa20.04■□□□□ 0.8
CSNK1E-210ENST00000442216 SMARCC1Q92922 1105 aaPredicted RBP20.04■□□□□ 0.8
CSNK1E-210ENST00000442216 PNNQ9H307 717 aaKnown RBP20.04■□□□□ 0.8
CSNK1E-210ENST00000442216 TMOD3Q9NYL9 352 aa20.04■□□□□ 0.8
CSNK1E-210ENST00000442216 HMGB2P26583 209 aaKnown RBP20.03■□□□□ 0.8
CSNK1E-210ENST00000442216 PIGBQ92521 554 aa20.03■□□□□ 0.8
CSNK1E-210ENST00000442216 PAPPAQ13219 1627 aa20.02■□□□□ 0.8
CSNK1E-210ENST00000442216 NEFMP07197 916 aa20.01■□□□□ 0.79
CSNK1E-210ENST00000442216 PHACTR3Q96KR7 559 aa20.01■□□□□ 0.79
CSNK1E-210ENST00000442216 DLG5Q8TDM6 1919 aa20.01■□□□□ 0.79
CSNK1E-210ENST00000442216 TAF1LQ8IZX4 1826 aa20.01■□□□□ 0.79
CSNK1E-210ENST00000442216 MRC1P22897 1456 aa20■□□□□ 0.79
CSNK1E-210ENST00000442216 PALLDQ8WX93 1383 aa20■□□□□ 0.79
CSNK1E-210ENST00000442216 MAP3K5Q99683 1374 aa20■□□□□ 0.79
CSNK1E-210ENST00000442216 ANP32CO43423 234 aa20■□□□□ 0.79
CSNK1E-210ENST00000442216 CABP4P57796 275 aa20■□□□□ 0.79
CSNK1E-210ENST00000442216 ZNF831Q5JPB2 1677 aa20■□□□□ 0.79
CSNK1E-210ENST00000442216 GNAT3A8MTJ3 354 aa19.99■□□□□ 0.79
CSNK1E-210ENST00000442216 RNMTO43148 476 aaKnown RBP19.99■□□□□ 0.79
CSNK1E-210ENST00000442216 C5P01031 1676 aa19.98■□□□□ 0.79
CSNK1E-210ENST00000442216 PLEKHF1Q96S99 279 aa19.98■□□□□ 0.79
CSNK1E-210ENST00000442216 QSER1Q2KHR3 1735 aa19.98■□□□□ 0.79
CSNK1E-210ENST00000442216 SIPA1L3O60292 1781 aaPredicted RBP19.98■□□□□ 0.79
CSNK1E-210ENST00000442216 LGR6Q9HBX8 967 aa19.97■□□□□ 0.79
CSNK1E-210ENST00000442216 LRRC4BQ9NT99 713 aa19.97■□□□□ 0.79
CSNK1E-210ENST00000442216 CCNL1Q9UK58 526 aaPredicted RBP19.97■□□□□ 0.79
CSNK1E-210ENST00000442216 NFATC2IPQ8NCF5 419 aa19.96■□□□□ 0.79
CSNK1E-210ENST00000442216 SLC52A2Q9HAB3 445 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms