RNA–Protein interactions for RNA: ENST00000441090.6

LRCH3-207, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2 BASIC

Gene LRCH3, Length 2,034 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-207ENST00000441090 MTHFSDQ2M296 383 aaKnown RBP23.64■■□□□ 1.37
LRCH3-207ENST00000441090 INTS3Q68E01 1043 aaKnown RBP23.64■■□□□ 1.37
LRCH3-207ENST00000441090 EYA1Q99502 592 aa23.63■■□□□ 1.37
LRCH3-207ENST00000441090 C22orf23Q9BZE7 217 aa23.63■■□□□ 1.37
LRCH3-207ENST00000441090 ZNF142P52746 1687 aaPredicted RBP23.63■■□□□ 1.37
LRCH3-207ENST00000441090 LRRC37A3O60309 1634 aa23.62■■□□□ 1.37
LRCH3-207ENST00000441090 NLRP6P59044 892 aa23.62■■□□□ 1.37
LRCH3-207ENST00000441090 ANKRD45Q5TZF3 282 aa23.62■■□□□ 1.37
LRCH3-207ENST00000441090 MFAP1P55081 439 aaKnown RBP23.62■■□□□ 1.37
LRCH3-207ENST00000441090 FOXO3O43524 673 aa23.6■■□□□ 1.37
LRCH3-207ENST00000441090 BMP2KLQ5H9B9 411 aa23.6■■□□□ 1.37
LRCH3-207ENST00000441090 RTF1Q92541 710 aaKnown RBP23.6■■□□□ 1.37
LRCH3-207ENST00000441090 PTPRCP08575 1304 aa23.6■■□□□ 1.37
LRCH3-207ENST00000441090 GAS2L2Q8NHY3 880 aa23.6■■□□□ 1.37
LRCH3-207ENST00000441090 TBC1D2Q9BYX2 928 aa23.6■■□□□ 1.37
LRCH3-207ENST00000441090 NWD1Q149M9 1564 aa23.59■■□□□ 1.37
LRCH3-207ENST00000441090 LTN1O94822 1766 aa23.58■■□□□ 1.36
LRCH3-207ENST00000441090 HOXC9P31274 260 aa23.57■■□□□ 1.36
LRCH3-207ENST00000441090 HTATSF1O43719 755 aaKnown RBP23.56■■□□□ 1.36
LRCH3-207ENST00000441090 TRHP20396 242 aaPredicted RBP23.56■■□□□ 1.36
LRCH3-207ENST00000441090 TSPYL4Q9UJ04 414 aa23.56■■□□□ 1.36
LRCH3-207ENST00000441090 ATP10DQ9P241 1426 aa23.56■■□□□ 1.36
LRCH3-207ENST00000441090 FRAT2O75474 233 aaPredicted RBP23.55■■□□□ 1.36
LRCH3-207ENST00000441090 ABTB2Q8N961 1025 aa23.55■■□□□ 1.36
LRCH3-207ENST00000441090 BCL11AQ9H165 835 aa23.55■■□□□ 1.36
LRCH3-207ENST00000441090 ANTXR1Q9H6X2 564 aa23.55■■□□□ 1.36
LRCH3-207ENST00000441090 MIS18AQ9NYP9 233 aa23.54■■□□□ 1.36
LRCH3-207ENST00000441090 MSH6P52701 1360 aa23.54■■□□□ 1.36
LRCH3-207ENST00000441090 CACNA1FO60840 1977 aa23.54■■□□□ 1.36
LRCH3-207ENST00000441090 NUTM2GQ5VZR2 741 aa23.54■■□□□ 1.36
LRCH3-207ENST00000441090 ANKLE2Q86XL3 938 aa23.54■■□□□ 1.36
LRCH3-207ENST00000441090 DCTPP1Q9H773 170 aa23.54■■□□□ 1.36
LRCH3-207ENST00000441090 ANKRD44Q8N8A2 993 aa23.53■■□□□ 1.36
LRCH3-207ENST00000441090 SLKQ9H2G2 1235 aaPredicted RBP23.53■■□□□ 1.36
LRCH3-207ENST00000441090 RTL1A6NKG5 1358 aa23.53■■□□□ 1.36
LRCH3-207ENST00000441090 SLC4A2P04920 1241 aa23.52■■□□□ 1.36
LRCH3-207ENST00000441090 RBM25P49756 843 aaKnown RBP23.52■■□□□ 1.36
LRCH3-207ENST00000441090 FAM208AQ9UK61 1670 aaKnown RBP23.52■■□□□ 1.36
LRCH3-207ENST00000441090 RPAP2Q8IXW5 612 aaPredicted RBP23.52■■□□□ 1.36
LRCH3-207ENST00000441090 PHF8Q9UPP1 1060 aa23.52■■□□□ 1.36
LRCH3-207ENST00000441090 SETD1BQ9UPS6 1966 aaKnown RBP23.51■■□□□ 1.35
LRCH3-207ENST00000441090 GNAT3A8MTJ3 354 aa23.5■■□□□ 1.35
LRCH3-207ENST00000441090 GSE1Q14687 1217 aa23.49■■□□□ 1.35
LRCH3-207ENST00000441090 CEP85Q6P2H3 762 aa23.49■■□□□ 1.35
LRCH3-207ENST00000441090 ADAMTSL3P82987 1691 aa23.49■■□□□ 1.35
LRCH3-207ENST00000441090 NFAT5O94916 1531 aa23.48■■□□□ 1.35
LRCH3-207ENST00000441090 MAP3K5Q99683 1374 aa23.48■■□□□ 1.35
LRCH3-207ENST00000441090 ADGRL3Q9HAR2 1447 aa23.47■■□□□ 1.35
LRCH3-207ENST00000441090 MEIS3Q99687 375 aa23.47■■□□□ 1.35
LRCH3-207ENST00000441090 G2E3Q7L622 706 aa23.46■■□□□ 1.35
LRCH3-207ENST00000441090 PHRF1Q9P1Y6 1649 aaKnown RBP23.46■■□□□ 1.35
LRCH3-207ENST00000441090 N4BP2Q86UW6 1770 aaPredicted RBP23.45■■□□□ 1.35
LRCH3-207ENST00000441090 PLEKHM2Q8IWE5 1019 aa23.45■■□□□ 1.35
LRCH3-207ENST00000441090 TBC1D9Q6ZT07 1266 aa23.45■■□□□ 1.34
LRCH3-207ENST00000441090 CCT4P50991 539 aaKnown RBP23.44■■□□□ 1.34
LRCH3-207ENST00000441090 C14orf37Q86TY3 774 aa23.44■■□□□ 1.34
LRCH3-207ENST00000441090 BABAM1Q9NWV8 329 aa23.44■■□□□ 1.34
LRCH3-207ENST00000441090 SOS1Q07889 1333 aaPredicted RBP23.44■■□□□ 1.34
LRCH3-207ENST00000441090 LTV1Q96GA3 475 aaPredicted RBP23.43■■□□□ 1.34
LRCH3-207ENST00000441090 IL17REQ8NFR9 667 aa23.43■■□□□ 1.34
LRCH3-207ENST00000441090 STK31Q9BXU1 1019 aa23.43■■□□□ 1.34
LRCH3-207ENST00000441090 GSPT1P15170 499 aaKnown RBP23.42■■□□□ 1.34
LRCH3-207ENST00000441090 HSCBQ8IWL3 235 aa23.42■■□□□ 1.34
LRCH3-207ENST00000441090 IP6K1Q92551 441 aa23.42■■□□□ 1.34
LRCH3-207ENST00000441090 CDC45O75419 566 aa23.42■■□□□ 1.34
LRCH3-207ENST00000441090 CCDC30Q5VVM6 783 aa23.41■■□□□ 1.34
LRCH3-207ENST00000441090 SNX21Q969T3 373 aa23.41■■□□□ 1.34
LRCH3-207ENST00000441090 RGPD2P0DJD1 1756 aa23.4■■□□□ 1.34
LRCH3-207ENST00000441090 F6X3S4 739 aa23.4■■□□□ 1.34
LRCH3-207ENST00000441090 RBM33Q96EV2 1170 aaKnown RBP23.4■■□□□ 1.34
LRCH3-207ENST00000441090 TAF7Q15545 349 aaPredicted RBP23.4■■□□□ 1.34
LRCH3-207ENST00000441090 TTC22Q5TAA0 569 aa23.4■■□□□ 1.34
LRCH3-207ENST00000441090 SLC4A10Q6U841 1118 aa23.39■■□□□ 1.34
LRCH3-207ENST00000441090 NCOA3Q9Y6Q9 1424 aa23.38■■□□□ 1.33
LRCH3-207ENST00000441090 HMMRO75330 724 aa23.38■■□□□ 1.33
LRCH3-207ENST00000441090 PSME1Q06323 249 aa23.38■■□□□ 1.33
LRCH3-207ENST00000441090 FLIIQ13045 1269 aa23.38■■□□□ 1.33
LRCH3-207ENST00000441090 ESCO1Q5FWF5 840 aa23.38■■□□□ 1.33
LRCH3-207ENST00000441090 USHBP1Q8N6Y0 703 aa23.38■■□□□ 1.33
LRCH3-207ENST00000441090 KIF2CQ99661 725 aa23.38■■□□□ 1.33
LRCH3-207ENST00000441090 MED1Q15648 1581 aaPredicted RBP23.37■■□□□ 1.33
LRCH3-207ENST00000441090 NPHP4O75161 1426 aaPredicted RBP23.37■■□□□ 1.33
LRCH3-207ENST00000441090 EIF5BO60841 1220 aaKnown RBP23.37■■□□□ 1.33
LRCH3-207ENST00000441090 C16orf71Q8IYS4 520 aaPredicted RBP23.37■■□□□ 1.33
LRCH3-207ENST00000441090 SPRYD3Q8NCJ5 442 aa23.37■■□□□ 1.33
LRCH3-207ENST00000441090 KCNH5Q8NCM2 988 aa23.37■■□□□ 1.33
LRCH3-207ENST00000441090 LMO7Q8WWI1 1683 aa23.36■■□□□ 1.33
LRCH3-207ENST00000441090 CEMIPQ8WUJ3 1361 aa23.36■■□□□ 1.33
LRCH3-207ENST00000441090 CHMP5Q9NZZ3 219 aa23.36■■□□□ 1.33
LRCH3-207ENST00000441090 KDM3BQ7LBC6 1761 aa23.36■■□□□ 1.33
LRCH3-207ENST00000441090 PXDNLA1KZ92 1463 aa23.35■■□□□ 1.33
LRCH3-207ENST00000441090 GNAI2P04899 355 aa23.34■■□□□ 1.33
LRCH3-207ENST00000441090 FKBP5Q13451 457 aaPredicted RBP23.34■■□□□ 1.33
LRCH3-207ENST00000441090 NBPF6Q5VWK0 638 aa23.34■■□□□ 1.33
LRCH3-207ENST00000441090 NBPF4Q96M43 638 aa23.34■■□□□ 1.33
LRCH3-207ENST00000441090 OTUD7AQ8TE49 926 aaPredicted RBP23.33■■□□□ 1.33
LRCH3-207ENST00000441090 SLIT3O75094 1523 aa23.33■■□□□ 1.33
LRCH3-207ENST00000441090 SMARCA5O60264 1052 aaPredicted RBP23.33■■□□□ 1.32
LRCH3-207ENST00000441090 GNAI3P08754 354 aa23.31■■□□□ 1.32
LRCH3-207ENST00000441090 NECTIN2Q92692 538 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms