RNA–Protein interactions for RNA: ENST00000441024.6

CNOT1-202, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNOT1, Length 4,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-202ENST00000441024 EFCAB6Q5THR3 1501 aa7.69□□□□□ -1.18
CNOT1-202ENST00000441024 IL16Q14005 1332 aa7.68□□□□□ -1.18
CNOT1-202ENST00000441024 XBP1P17861 261 aa7.68□□□□□ -1.18
CNOT1-202ENST00000441024 WASHC4Q2M389 1173 aa7.68□□□□□ -1.18
CNOT1-202ENST00000441024 SYTL4Q96C24 671 aaPredicted RBP7.68□□□□□ -1.18
CNOT1-202ENST00000441024 PUS7Q96PZ0 661 aaKnown RBP7.68□□□□□ -1.18
CNOT1-202ENST00000441024 TRIM34Q9BYJ4 488 aa7.68□□□□□ -1.18
CNOT1-202ENST00000441024 PLA2R1Q13018 1463 aa7.68□□□□□ -1.18
CNOT1-202ENST00000441024 DHX16O60231 1041 aaKnown RBP7.68□□□□□ -1.18
CNOT1-202ENST00000441024 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.68□□□□□ -1.18
CNOT1-202ENST00000441024 AEBP1Q8IUX7 1158 aa7.68□□□□□ -1.18
CNOT1-202ENST00000441024 NAT10Q9H0A0 1025 aaKnown RBP7.68□□□□□ -1.18
CNOT1-202ENST00000441024 ADGRF5Q8IZF2 1346 aa7.68□□□□□ -1.18
CNOT1-202ENST00000441024 NEO1Q92859 1461 aa7.68□□□□□ -1.18
CNOT1-202ENST00000441024 ANKRD36BQ8N2N9 1353 aa7.68□□□□□ -1.18
CNOT1-202ENST00000441024 GNAT3A8MTJ3 354 aa7.68□□□□□ -1.18
CNOT1-202ENST00000441024 NOC3LQ8WTT2 800 aaKnown RBP7.68□□□□□ -1.18
CNOT1-202ENST00000441024 BRMS1Q9HCU9 246 aa7.68□□□□□ -1.18
CNOT1-202ENST00000441024 KNDC1Q76NI1 1749 aa7.68□□□□□ -1.18
CNOT1-202ENST00000441024 MARF1Q9Y4F3 1742 aaKnown RBP7.68□□□□□ -1.18
CNOT1-202ENST00000441024 NOS1P29475 1434 aa7.67□□□□□ -1.18
CNOT1-202ENST00000441024 SART3Q15020 963 aaKnown RBP7.67□□□□□ -1.18
CNOT1-202ENST00000441024 NEK4P51957 841 aa7.67□□□□□ -1.18
CNOT1-202ENST00000441024 CABP4P57796 275 aa7.67□□□□□ -1.18
CNOT1-202ENST00000441024 CCDC39Q9UFE4 941 aa7.67□□□□□ -1.18
CNOT1-202ENST00000441024 TMEM131LA2VDJ0 1609 aa7.67□□□□□ -1.18
CNOT1-202ENST00000441024 WASLO00401 505 aaPredicted RBP7.67□□□□□ -1.18
CNOT1-202ENST00000441024 TRAK2O60296 914 aa7.67□□□□□ -1.18
CNOT1-202ENST00000441024 RARSP54136 660 aaKnown RBP7.67□□□□□ -1.18
CNOT1-202ENST00000441024 CCDC158Q5M9N0 1113 aa7.67□□□□□ -1.18
CNOT1-202ENST00000441024 RBM33Q96EV2 1170 aaKnown RBP7.67□□□□□ -1.18
CNOT1-202ENST00000441024 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.67□□□□□ -1.184e-7■■■□□ 18.3
CNOT1-202ENST00000441024 TTC21BQ7Z4L5 1316 aa7.66□□□□□ -1.18
CNOT1-202ENST00000441024 CLTCL1P53675 1640 aa7.66□□□□□ -1.18
CNOT1-202ENST00000441024 K7ELQ4 463 aaPredicted RBP7.66□□□□□ -1.18
CNOT1-202ENST00000441024 RAB11FIP3O75154 756 aa7.66□□□□□ -1.18
CNOT1-202ENST00000441024 HMGB2P26583 209 aaKnown RBP7.66□□□□□ -1.18
CNOT1-202ENST00000441024 DHX8Q14562 1220 aaKnown RBP7.66□□□□□ -1.18
CNOT1-202ENST00000441024 FOXD4L6Q3SYB3 417 aaPredicted RBP7.66□□□□□ -1.18
CNOT1-202ENST00000441024 CCDC70Q6NSX1 233 aa7.66□□□□□ -1.18
CNOT1-202ENST00000441024 FOXD4L3Q6VB84 417 aaPredicted RBP7.66□□□□□ -1.18
CNOT1-202ENST00000441024 ZSCAN31Q96LW9 406 aaPredicted RBP7.66□□□□□ -1.18
CNOT1-202ENST00000441024 ZNF396Q96N95 335 aaPredicted RBP7.66□□□□□ -1.18
CNOT1-202ENST00000441024 AMOTQ4VCS5 1084 aa7.66□□□□□ -1.18
CNOT1-202ENST00000441024 ZSCAN25Q6NSZ9 544 aa7.66□□□□□ -1.18
CNOT1-202ENST00000441024 IL27Q8NEV9 243 aa7.66□□□□□ -1.18
CNOT1-202ENST00000441024 ATP7AQ04656 1500 aa7.66□□□□□ -1.18
CNOT1-202ENST00000441024 LRPPRCP42704 1394 aaKnown RBP7.66□□□□□ -1.18
CNOT1-202ENST00000441024 COL17A1Q9UMD9 1497 aaPredicted RBP7.66□□□□□ -1.18
CNOT1-202ENST00000441024 MEX3CQ5U5Q3 659 aaKnown RBP7.66□□□□□ -1.18
CNOT1-202ENST00000441024 CREBRFQ8IUR6 639 aa7.66□□□□□ -1.18
CNOT1-202ENST00000441024 CEP89Q96ST8 783 aa7.66□□□□□ -1.18
CNOT1-202ENST00000441024 C1orf115Q9H7X2 142 aa7.66□□□□□ -1.18
CNOT1-202ENST00000441024 CYP46A1Q9Y6A2 500 aa7.66□□□□□ -1.18
CNOT1-202ENST00000441024 GNL3LQ9NVN8 582 aaKnown RBP7.66□□□□□ -1.18
CNOT1-202ENST00000441024 IDI1Q13907 227 aa7.65□□□□□ -1.18
CNOT1-202ENST00000441024 RRS1Q15050 365 aaKnown RBP7.65□□□□□ -1.18
CNOT1-202ENST00000441024 VPS53Q5VIR6 699 aa7.65□□□□□ -1.18
CNOT1-202ENST00000441024 SLC26A8Q96RN1 970 aa7.65□□□□□ -1.18
CNOT1-202ENST00000441024 CLTCQ00610 1675 aaKnown RBP7.65□□□□□ -1.18
CNOT1-202ENST00000441024 BTBD11A6QL63 1104 aa7.65□□□□□ -1.18
CNOT1-202ENST00000441024 IPO7O95373 1038 aaKnown RBP7.65□□□□□ -1.18
CNOT1-202ENST00000441024 SLC3A2P08195 630 aaKnown RBP7.65□□□□□ -1.18
CNOT1-202ENST00000441024 WDR33Q9C0J8 1336 aaKnown RBP7.65□□□□□ -1.18
CNOT1-202ENST00000441024 TMEM57Q8N5G2 664 aa7.65□□□□□ -1.19
CNOT1-202ENST00000441024 ANO8Q9HCE9 1232 aaPredicted RBP7.65□□□□□ -1.19
CNOT1-202ENST00000441024 TRPM2O94759 1503 aa7.65□□□□□ -1.19
CNOT1-202ENST00000441024 ASXL1Q8IXJ9 1541 aa7.65□□□□□ -1.19
CNOT1-202ENST00000441024 PRAG1Q86YV5 1406 aa7.65□□□□□ -1.19
CNOT1-202ENST00000441024 DISP3Q9P2K9 1392 aa7.64□□□□□ -1.19
CNOT1-202ENST00000441024 GPS2Q13227 327 aa7.64□□□□□ -1.19
CNOT1-202ENST00000441024 TTC39AQ5SRH9 613 aa7.64□□□□□ -1.19
CNOT1-202ENST00000441024 NASPP49321 788 aaPredicted RBP7.64□□□□□ -1.19
CNOT1-202ENST00000441024 KRT32Q14532 448 aa7.64□□□□□ -1.19
CNOT1-202ENST00000441024 OLFM4Q6UX06 510 aa7.64□□□□□ -1.19
CNOT1-202ENST00000441024 ASXL2Q76L83 1435 aa7.64□□□□□ -1.19
CNOT1-202ENST00000441024 PES1O00541 588 aaKnown RBP7.64□□□□□ -1.19
CNOT1-202ENST00000441024 A2MP01023 1474 aa7.64□□□□□ -1.19
CNOT1-202ENST00000441024 PTPRCP08575 1304 aa7.64□□□□□ -1.19
CNOT1-202ENST00000441024 A0A0U1RQG5 324 aaPredicted RBP7.64□□□□□ -1.19
CNOT1-202ENST00000441024 TAF7Q15545 349 aaPredicted RBP7.64□□□□□ -1.19
CNOT1-202ENST00000441024 DNAJC2Q99543 621 aaKnown RBP7.64□□□□□ -1.19
CNOT1-202ENST00000441024 TSPY26PQ9H489 355 aa7.64□□□□□ -1.19
CNOT1-202ENST00000441024 C3P01024 1663 aa7.64□□□□□ -1.19
CNOT1-202ENST00000441024 DUSP27Q5VZP5 1158 aa7.63□□□□□ -1.19
CNOT1-202ENST00000441024 FAM43AQ8N2R8 423 aa7.63□□□□□ -1.19
CNOT1-202ENST00000441024 PTPRTO14522 1441 aa7.63□□□□□ -1.19
CNOT1-202ENST00000441024 TOM1L2Q6ZVM7 507 aa7.63□□□□□ -1.19
CNOT1-202ENST00000441024 CTNNA3Q9UI47 895 aa7.63□□□□□ -1.19
CNOT1-202ENST00000441024 CTDP1Q9Y5B0 961 aaPredicted RBP7.63□□□□□ -1.19
CNOT1-202ENST00000441024 SPATA31D1Q6ZQQ2 1576 aa7.63□□□□□ -1.19
CNOT1-202ENST00000441024 UBR1Q8IWV7 1749 aa7.63□□□□□ -1.19
CNOT1-202ENST00000441024 MSH5O43196 834 aa7.63□□□□□ -1.19
CNOT1-202ENST00000441024 WAPLQ7Z5K2 1190 aa7.63□□□□□ -1.19
CNOT1-202ENST00000441024 CCDC173Q0VFZ6 552 aa7.63□□□□□ -1.19
CNOT1-202ENST00000441024 HSP90AA2PQ14568 343 aaPredicted RBP7.63□□□□□ -1.19
CNOT1-202ENST00000441024 JMYQ8N9B5 988 aa7.63□□□□□ -1.19
CNOT1-202ENST00000441024 SSH1Q8WYL5 1049 aa7.63□□□□□ -1.19
CNOT1-202ENST00000441024 RBM42Q9BTD8 480 aaKnown RBP7.63□□□□□ -1.19
CNOT1-202ENST00000441024 KIF1BPQ96EK5 621 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms