RNA–Protein interactions for RNA: ENST00000440903.1

CCDC140-202, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC140, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-202ENST00000440903 AKAP12Q02952 1782 aa6.78□□□□□ -1.32
CCDC140-202ENST00000440903 GOLGA8CPA6NN73 597 aa6.78□□□□□ -1.32
CCDC140-202ENST00000440903 TBC1D12O60347 775 aa6.78□□□□□ -1.32
CCDC140-202ENST00000440903 HAP1P54257 671 aaPredicted RBP6.78□□□□□ -1.32
CCDC140-202ENST00000440903 BRINP3Q76B58 766 aa6.78□□□□□ -1.32
CCDC140-202ENST00000440903 PTCD2Q8WV60 388 aaKnown RBP6.78□□□□□ -1.32
CCDC140-202ENST00000440903 ORAI2Q96SN7 254 aa6.78□□□□□ -1.32
CCDC140-202ENST00000440903 NRKQ7Z2Y5 1582 aa6.78□□□□□ -1.32
CCDC140-202ENST00000440903 CPSF1Q10570 1443 aaKnown RBP6.77□□□□□ -1.33
CCDC140-202ENST00000440903 PHLPP1O60346 1717 aa6.77□□□□□ -1.33
CCDC140-202ENST00000440903 FOXO3O43524 673 aa6.77□□□□□ -1.33
CCDC140-202ENST00000440903 LMOD2Q6P5Q4 547 aa6.77□□□□□ -1.33
CCDC140-202ENST00000440903 SLC12A5Q9H2X9 1139 aa6.77□□□□□ -1.33
CCDC140-202ENST00000440903 SBNO1A3KN83 1393 aa6.77□□□□□ -1.33
CCDC140-202ENST00000440903 RGPD8O14715 1765 aaPredicted RBP6.77□□□□□ -1.33
CCDC140-202ENST00000440903 KIF20BQ96Q89 1820 aa6.76□□□□□ -1.33
CCDC140-202ENST00000440903 DDX10Q13206 875 aaKnown RBP6.76□□□□□ -1.33
CCDC140-202ENST00000440903 KRT28Q7Z3Y7 464 aa6.76□□□□□ -1.33
CCDC140-202ENST00000440903 PANK3Q9H999 370 aa6.76□□□□□ -1.33
CCDC140-202ENST00000440903 PXDNQ92626 1479 aa6.75□□□□□ -1.33
CCDC140-202ENST00000440903 CD163L1Q9NR16 1453 aa6.75□□□□□ -1.33
CCDC140-202ENST00000440903 A0A0G2JS52 829 aa6.75□□□□□ -1.33
CCDC140-202ENST00000440903 C11orf95C9JLR9 678 aaPredicted RBP6.75□□□□□ -1.33
CCDC140-202ENST00000440903 IFFO2Q5TF58 517 aa6.75□□□□□ -1.33
CCDC140-202ENST00000440903 NLRP13Q86W25 1043 aa6.75□□□□□ -1.33
CCDC140-202ENST00000440903 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.75□□□□□ -1.33
CCDC140-202ENST00000440903 PLPP6Q8IY26 295 aa6.75□□□□□ -1.33
CCDC140-202ENST00000440903 LRRC59Q96AG4 307 aaKnown RBP6.75□□□□□ -1.33
CCDC140-202ENST00000440903 COG3Q96JB2 828 aa6.75□□□□□ -1.33
CCDC140-202ENST00000440903 VPS9D1Q9Y2B5 631 aa6.75□□□□□ -1.33
CCDC140-202ENST00000440903 SOS2Q07890 1332 aaPredicted RBP6.75□□□□□ -1.33
CCDC140-202ENST00000440903 TTC21BQ7Z4L5 1316 aa6.75□□□□□ -1.33
CCDC140-202ENST00000440903 MED1Q15648 1581 aaPredicted RBP6.74□□□□□ -1.33
CCDC140-202ENST00000440903 JCADQ9P266 1359 aa6.74□□□□□ -1.33
CCDC140-202ENST00000440903 NPC1L1Q9UHC9 1359 aa6.74□□□□□ -1.33
CCDC140-202ENST00000440903 ANP32CO43423 234 aa6.74□□□□□ -1.33
CCDC140-202ENST00000440903 XPCQ01831 940 aaPredicted RBP6.74□□□□□ -1.33
CCDC140-202ENST00000440903 ABTB2Q8N961 1025 aa6.74□□□□□ -1.33
CCDC140-202ENST00000440903 KCNH5Q8NCM2 988 aa6.74□□□□□ -1.33
CCDC140-202ENST00000440903 COL16A1Q07092 1604 aaPredicted RBP6.74□□□□□ -1.33
CCDC140-202ENST00000440903 SPATA31A3Q5VYP0 1347 aa6.74□□□□□ -1.33
CCDC140-202ENST00000440903 TRPM3Q9HCF6 1732 aaPredicted RBP6.73□□□□□ -1.33
CCDC140-202ENST00000440903 ANKRD26Q9UPS8 1709 aa6.73□□□□□ -1.33
CCDC140-202ENST00000440903 THSD4Q6ZMP0 1018 aa6.73□□□□□ -1.33
CCDC140-202ENST00000440903 MORC1Q86VD1 984 aa6.73□□□□□ -1.33
CCDC140-202ENST00000440903 FBXO41Q8TF61 875 aa6.73□□□□□ -1.33
CCDC140-202ENST00000440903 PIK3C2AO00443 1686 aa6.73□□□□□ -1.33
CCDC140-202ENST00000440903 OVOS2A0A0J9YW53 1432 aa6.73□□□□□ -1.33
CCDC140-202ENST00000440903 OVOS2Q6IE36 1432 aa6.73□□□□□ -1.33
CCDC140-202ENST00000440903 USP31Q70CQ4 1352 aa6.72□□□□□ -1.33
CCDC140-202ENST00000440903 SHPRHQ149N8 1683 aa6.72□□□□□ -1.33
CCDC140-202ENST00000440903 USP54Q70EL1 1684 aa6.72□□□□□ -1.33
CCDC140-202ENST00000440903 ALS2Q96Q42 1657 aa6.72□□□□□ -1.33
CCDC140-202ENST00000440903 PPP1R37O75864 691 aa6.72□□□□□ -1.33
CCDC140-202ENST00000440903 ECM2O94769 699 aaPredicted RBP6.72□□□□□ -1.33
CCDC140-202ENST00000440903 FOXK1P85037 733 aa6.72□□□□□ -1.33
CCDC140-202ENST00000440903 RALBP1Q15311 655 aa6.72□□□□□ -1.33
CCDC140-202ENST00000440903 NME9Q86XW9 330 aa6.72□□□□□ -1.33
CCDC140-202ENST00000440903 WNT2BQ93097 391 aa6.72□□□□□ -1.33
CCDC140-202ENST00000440903 SSH2Q76I76 1423 aa6.72□□□□□ -1.33
CCDC140-202ENST00000440903 COL22A1Q8NFW1 1626 aaPredicted RBP6.72□□□□□ -1.33
CCDC140-202ENST00000440903 PNPLA6Q8IY17 1366 aa6.71□□□□□ -1.33
CCDC140-202ENST00000440903 SMG6Q86US8 1419 aaKnown RBP6.71□□□□□ -1.34
CCDC140-202ENST00000440903 CNGB1Q14028 1251 aaPredicted RBP6.71□□□□□ -1.34
CCDC140-202ENST00000440903 CC2D1BQ5T0F9 858 aaKnown RBP6.71□□□□□ -1.34
CCDC140-202ENST00000440903 DIEXFQ68CQ4 756 aaKnown RBP6.71□□□□□ -1.34
CCDC140-202ENST00000440903 Q6ZNB5 142 aa6.71□□□□□ -1.34
CCDC140-202ENST00000440903 MRPL50Q8N5N7 158 aaKnown RBP6.71□□□□□ -1.34
CCDC140-202ENST00000440903 ZNF454Q8N9F8 522 aa6.71□□□□□ -1.34
CCDC140-202ENST00000440903 CFAP53Q96M91 514 aa6.71□□□□□ -1.34
CCDC140-202ENST00000440903 GGNBP2Q9H3C7 697 aa6.71□□□□□ -1.34
CCDC140-202ENST00000440903 PHRF1Q9P1Y6 1649 aaKnown RBP6.71□□□□□ -1.34
CCDC140-202ENST00000440903 SPATA31A6Q5VVP1 1343 aa6.71□□□□□ -1.34
CCDC140-202ENST00000440903 SLIT3O75094 1523 aa6.71□□□□□ -1.34
CCDC140-202ENST00000440903 RTL1A6NKG5 1358 aa6.7□□□□□ -1.34
CCDC140-202ENST00000440903 ZBTB7CA1YPR0 619 aa6.7□□□□□ -1.34
CCDC140-202ENST00000440903 MEX3CQ5U5Q3 659 aaKnown RBP6.7□□□□□ -1.34
CCDC140-202ENST00000440903 NUTM2GQ5VZR2 741 aa6.7□□□□□ -1.34
CCDC140-202ENST00000440903 DDX17Q92841 729 aaKnown RBP6.7□□□□□ -1.34
CCDC140-202ENST00000440903 USP19O94966 1318 aa6.7□□□□□ -1.34
CCDC140-202ENST00000440903 MYBBP1AQ9BQG0 1328 aaKnown RBP6.7□□□□□ -1.34
CCDC140-202ENST00000440903 ABCC6O95255 1503 aa6.7□□□□□ -1.34
CCDC140-202ENST00000440903 KIF24Q5T7B8 1368 aa6.69□□□□□ -1.34
CCDC140-202ENST00000440903 PARD3Q8TEW0 1356 aa6.69□□□□□ -1.34
CCDC140-202ENST00000440903 FYB1O15117 783 aa6.69□□□□□ -1.34
CCDC140-202ENST00000440903 HSPA1LP34931 641 aa6.69□□□□□ -1.34
CCDC140-202ENST00000440903 AMER1Q5JTC6 1135 aaPredicted RBP6.69□□□□□ -1.34
CCDC140-202ENST00000440903 CARD14Q9BXL6 1004 aa6.69□□□□□ -1.34
CCDC140-202ENST00000440903 GPHNQ9NQX3 736 aaPredicted RBP6.69□□□□□ -1.34
CCDC140-202ENST00000440903 ABCA3Q99758 1704 aa6.69□□□□□ -1.34
CCDC140-202ENST00000440903 AATKQ6ZMQ8 1374 aa6.69□□□□□ -1.34
CCDC140-202ENST00000440903 CDK12Q9NYV4 1490 aaPredicted RBP6.68□□□□□ -1.34
CCDC140-202ENST00000440903 PER1O15534 1290 aaPredicted RBP6.68□□□□□ -1.34
CCDC140-202ENST00000440903 PTPREP23469 700 aa6.68□□□□□ -1.34
CCDC140-202ENST00000440903 TNNT2P45379 298 aaPredicted RBP6.68□□□□□ -1.34
CCDC140-202ENST00000440903 AMPHP49418 695 aa6.68□□□□□ -1.34
CCDC140-202ENST00000440903 DSG2Q14126 1118 aa6.68□□□□□ -1.34
CCDC140-202ENST00000440903 UPF1Q92900 1129 aaKnown RBP eCLIP6.68□□□□□ -1.34
CCDC140-202ENST00000440903 PRDM11Q9NQV5 511 aa6.68□□□□□ -1.34
CCDC140-202ENST00000440903 FLT4P35916 1363 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms