RNA–Protein interactions for RNA: ENST00000440571.5

CNOT3-203, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 1,125 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-203ENST00000440571 BAG6P46379 1132 aa30.31■■■□□ 2.44
CNOT3-203ENST00000440571 RGPD2P0DJD1 1756 aa30.31■■■□□ 2.44
CNOT3-203ENST00000440571 PARD3Q8TEW0 1356 aa30.3■■■□□ 2.44
CNOT3-203ENST00000440571 APBA3O96018 575 aa30.3■■■□□ 2.44
CNOT3-203ENST00000440571 DEFB132Q7Z7B7 95 aa30.3■■■□□ 2.44
CNOT3-203ENST00000440571 BCL9O00512 1426 aa30.3■■■□□ 2.44
CNOT3-203ENST00000440571 BCL11BQ9C0K0 894 aaPredicted RBP30.29■■■□□ 2.44
CNOT3-203ENST00000440571 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.29■■■□□ 2.44
CNOT3-203ENST00000440571 AEBP1Q8IUX7 1158 aa30.28■■■□□ 2.44
CNOT3-203ENST00000440571 WNK3Q9BYP7 1800 aa30.27■■■□□ 2.44
CNOT3-203ENST00000440571 U2SURPO15042 1029 aaKnown RBP30.27■■■□□ 2.44
CNOT3-203ENST00000440571 ACSBG1Q96GR2 724 aa30.27■■■□□ 2.44
CNOT3-203ENST00000440571 PCDH11XQ9BZA7 1347 aa30.26■■■□□ 2.44
CNOT3-203ENST00000440571 PCDH11YQ9BZA8 1340 aa30.26■■■□□ 2.44
CNOT3-203ENST00000440571 NUDCQ9Y266 331 aa30.26■■■□□ 2.43
CNOT3-203ENST00000440571 PLEKHO1Q53GL0 409 aaPredicted RBP30.25■■■□□ 2.43
CNOT3-203ENST00000440571 HMOX1P09601 288 aa30.24■■■□□ 2.43
CNOT3-203ENST00000440571 EN1Q05925 392 aaPredicted RBP30.24■■■□□ 2.43
CNOT3-203ENST00000440571 CYP27B1O15528 508 aa30.23■■■□□ 2.43
CNOT3-203ENST00000440571 KCNQ2O43526 872 aa30.23■■■□□ 2.43
CNOT3-203ENST00000440571 PTF1AQ7RTS3 328 aa30.23■■■□□ 2.43
CNOT3-203ENST00000440571 AMOTQ4VCS5 1084 aa30.22■■■□□ 2.43
CNOT3-203ENST00000440571 IFNL2Q8IZJ0 200 aa30.2■■■□□ 2.43
CNOT3-203ENST00000440571 KDRP35968 1356 aa30.19■■■□□ 2.42
CNOT3-203ENST00000440571 PRIM1P49642 420 aaKnown RBP30.19■■■□□ 2.42
CNOT3-203ENST00000440571 SYTL4Q96C24 671 aaPredicted RBP30.18■■■□□ 2.42
CNOT3-203ENST00000440571 PLEKHG2Q9H7P9 1386 aa30.17■■■□□ 2.42
CNOT3-203ENST00000440571 EZH2Q15910 746 aaKnown RBP30.17■■■□□ 2.42
CNOT3-203ENST00000440571 CAMKK2Q96RR4 588 aa30.17■■■□□ 2.42
CNOT3-203ENST00000440571 PRKRIP1Q9H875 184 aaPredicted RBP30.17■■■□□ 2.42
CNOT3-203ENST00000440571 COL3A1P02461 1466 aaPredicted RBP30.17■■■□□ 2.42
CNOT3-203ENST00000440571 MYBBP1AQ9BQG0 1328 aaKnown RBP30.17■■■□□ 2.42
CNOT3-203ENST00000440571 PHKG2P15735 406 aa30.16■■■□□ 2.42
CNOT3-203ENST00000440571 NKX1-1Q15270 411 aaPredicted RBP30.16■■■□□ 2.42
CNOT3-203ENST00000440571 PLSCR1O15162 318 aa30.15■■■□□ 2.42
CNOT3-203ENST00000440571 U2AF1L5P0DN76 240 aaPredicted RBP30.15■■■□□ 2.42
CNOT3-203ENST00000440571 U2AF1Q01081 240 aaKnown RBP eCLIP30.15■■■□□ 2.42
CNOT3-203ENST00000440571 ZNF530Q6P9A1 599 aaPredicted RBP30.15■■■□□ 2.42
CNOT3-203ENST00000440571 C1orf141Q5JVX7 400 aa30.12■■■□□ 2.41
CNOT3-203ENST00000440571 RGPD1P0DJD0 1748 aa30.11■■■□□ 2.41
CNOT3-203ENST00000440571 HSP90AB1P08238 724 aaKnown RBP30.11■■■□□ 2.41
CNOT3-203ENST00000440571 FCHSD2O94868 740 aa30.08■■■□□ 2.41
CNOT3-203ENST00000440571 MPRIPQ6WCQ1 1025 aa30.07■■■□□ 2.4
CNOT3-203ENST00000440571 MTHFSDQ2M296 383 aaKnown RBP30.06■■■□□ 2.4
CNOT3-203ENST00000440571 DCAF5Q96JK2 942 aa30.06■■■□□ 2.4
CNOT3-203ENST00000440571 RSPH6AQ9H0K4 717 aa30.06■■■□□ 2.4
CNOT3-203ENST00000440571 PRKAR2BP31323 418 aa30.05■■■□□ 2.4
CNOT3-203ENST00000440571 AKAP4Q5JQC9 854 aa30.05■■■□□ 2.4
CNOT3-203ENST00000440571 ANP32CO43423 234 aa30.04■■■□□ 2.4
CNOT3-203ENST00000440571 PKD1L3Q7Z443 1732 aa30.02■■■□□ 2.4
CNOT3-203ENST00000440571 SHANK3Q9BYB0 1731 aa30.02■■■□□ 2.4
CNOT3-203ENST00000440571 TNS1Q9HBL0 1735 aaKnown RBP30.02■■■□□ 2.4
CNOT3-203ENST00000440571 ERVV-2B6SEH9 535 aa30.02■■■□□ 2.4
CNOT3-203ENST00000440571 TXNRD1Q16881 649 aa30.02■■■□□ 2.4
CNOT3-203ENST00000440571 PROM2Q8N271 834 aa30.02■■■□□ 2.4
CNOT3-203ENST00000440571 SBF2Q86WG5 1849 aa30.01■■■□□ 2.4
CNOT3-203ENST00000440571 GAS2L2Q8NHY3 880 aa30.01■■■□□ 2.39
CNOT3-203ENST00000440571 PIGBQ92521 554 aa30.01■■■□□ 2.39
CNOT3-203ENST00000440571 PHACTR3Q96KR7 559 aa30.01■■■□□ 2.39
CNOT3-203ENST00000440571 TMOD3Q9NYL9 352 aa30.01■■■□□ 2.39
CNOT3-203ENST00000440571 NBPF14Q5TI25 921 aa29.99■■■□□ 2.39
CNOT3-203ENST00000440571 PNNQ9H307 717 aaKnown RBP29.99■■■□□ 2.39
CNOT3-203ENST00000440571 NEFMP07197 916 aa29.98■■■□□ 2.39
CNOT3-203ENST00000440571 CABP4P57796 275 aa29.98■■■□□ 2.39
CNOT3-203ENST00000440571 KAT6BQ8WYB5 2073 aa29.98■■■□□ 2.39
CNOT3-203ENST00000440571 NHSQ6T4R5 1651 aa29.97■■■□□ 2.39
CNOT3-203ENST00000440571 SMARCC1Q92922 1105 aaPredicted RBP29.95■■■□□ 2.39
CNOT3-203ENST00000440571 LGR6Q9HBX8 967 aa29.95■■■□□ 2.39
CNOT3-203ENST00000440571 GNAT3A8MTJ3 354 aa29.93■■■□□ 2.38
CNOT3-203ENST00000440571 RNMTO43148 476 aaKnown RBP29.93■■■□□ 2.38
CNOT3-203ENST00000440571 WDR43Q15061 677 aaKnown RBP eCLIP29.93■■■□□ 2.38
CNOT3-203ENST00000440571 SLC27A3Q5K4L6 730 aa29.93■■■□□ 2.38
CNOT3-203ENST00000440571 NFATC2IPQ8NCF5 419 aa29.92■■■□□ 2.38
CNOT3-203ENST00000440571 KDM6AO15550 1401 aaPredicted RBP29.91■■■□□ 2.38
CNOT3-203ENST00000440571 PLEKHF1Q96S99 279 aa29.9■■■□□ 2.38
CNOT3-203ENST00000440571 ASAP1Q9ULH1 1129 aa29.9■■■□□ 2.38
CNOT3-203ENST00000440571 DOT1LQ8TEK3 1739 aa29.89■■■□□ 2.38
CNOT3-203ENST00000440571 LRRC4BQ9NT99 713 aa29.89■■■□□ 2.38
CNOT3-203ENST00000440571 R3HDM1Q15032 1099 aaKnown RBP29.88■■■□□ 2.37
CNOT3-203ENST00000440571 ATG3Q9NT62 314 aa29.88■■■□□ 2.37
CNOT3-203ENST00000440571 CCNL1Q9UK58 526 aaPredicted RBP29.88■■■□□ 2.37
CNOT3-203ENST00000440571 PSDA5PKW4 1024 aaPredicted RBP29.87■■■□□ 2.37
CNOT3-203ENST00000440571 KCNQ4P56696 695 aa29.87■■■□□ 2.37
CNOT3-203ENST00000440571 SLC52A2Q9HAB3 445 aa29.87■■■□□ 2.37
CNOT3-203ENST00000440571 PALLDQ8WX93 1383 aa29.87■■■□□ 2.37
CNOT3-203ENST00000440571 MAP3K5Q99683 1374 aa29.87■■■□□ 2.37
CNOT3-203ENST00000440571 IL17REQ8NFR9 667 aa29.86■■■□□ 2.37
CNOT3-203ENST00000440571 RTF1Q92541 710 aaKnown RBP29.86■■■□□ 2.37
CNOT3-203ENST00000440571 ADAMTS8Q9UP79 889 aa29.86■■■□□ 2.37
CNOT3-203ENST00000440571 BTAF1O14981 1849 aa29.86■■■□□ 2.37
CNOT3-203ENST00000440571 MAPK8IP3Q9UPT6 1336 aa29.86■■■□□ 2.37
CNOT3-203ENST00000440571 STK32BQ9NY57 414 aa29.85■■■□□ 2.37
CNOT3-203ENST00000440571 HMGB2P26583 209 aaKnown RBP29.84■■■□□ 2.37
CNOT3-203ENST00000440571 HTATSF1O43719 755 aaKnown RBP29.82■■■□□ 2.36
CNOT3-203ENST00000440571 TEFQ10587 303 aa29.82■■■□□ 2.36
CNOT3-203ENST00000440571 CCDC184Q52MB2 194 aa29.82■■■□□ 2.36
CNOT3-203ENST00000440571 ANO8Q9HCE9 1232 aaPredicted RBP29.82■■■□□ 2.36
CNOT3-203ENST00000440571 LOC102724428A0A0B4J2F2 783 aa29.81■■■□□ 2.36
CNOT3-203ENST00000440571 SIK1P57059 783 aa29.81■■■□□ 2.36
CNOT3-203ENST00000440571 NFE2L2Q16236 605 aa29.81■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms