RNA–Protein interactions for RNA: ENST00000440126.7

APP-209, Transcript of amyloid beta precursor protein, humanhuman

TSL 2 BASIC

Gene APP, Length 2,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-209ENST00000440126 IPO8O15397 1037 aaKnown RBP9.97□□□□□ -0.81
APP-209ENST00000440126 SPRYD3Q8NCJ5 442 aa9.97□□□□□ -0.81
APP-209ENST00000440126 ZNF428Q96B54 188 aa9.97□□□□□ -0.81
APP-209ENST00000440126 NAP1L2Q9ULW6 460 aaPredicted RBP9.97□□□□□ -0.81
APP-209ENST00000440126 NRKQ7Z2Y5 1582 aa9.97□□□□□ -0.81
APP-209ENST00000440126 TOPAZ1Q8N9V7 1692 aa9.97□□□□□ -0.81
APP-209ENST00000440126 F6X3S4 739 aa9.97□□□□□ -0.81
APP-209ENST00000440126 PSME1Q06323 249 aa9.97□□□□□ -0.81
APP-209ENST00000440126 LRRC59Q96AG4 307 aaKnown RBP9.97□□□□□ -0.81
APP-209ENST00000440126 CT47B1P0C2W7 299 aaPredicted RBP9.96□□□□□ -0.81
APP-209ENST00000440126 SLC4A10Q6U841 1118 aa9.96□□□□□ -0.81
APP-209ENST00000440126 G2E3Q7L622 706 aa9.96□□□□□ -0.81
APP-209ENST00000440126 FAM43AQ8N2R8 423 aa9.96□□□□□ -0.81
APP-209ENST00000440126 SSH2Q76I76 1423 aa9.96□□□□□ -0.82
APP-209ENST00000440126 HOXC9P31274 260 aa9.96□□□□□ -0.82
APP-209ENST00000440126 TSPYL4Q9UJ04 414 aa9.96□□□□□ -0.82
APP-209ENST00000440126 USP19O94966 1318 aa9.95□□□□□ -0.82
APP-209ENST00000440126 MFAP1P55081 439 aaKnown RBP9.95□□□□□ -0.82
APP-209ENST00000440126 LMOD3Q0VAK6 560 aa9.95□□□□□ -0.82
APP-209ENST00000440126 ANKRD45Q5TZF3 282 aa9.95□□□□□ -0.82
APP-209ENST00000440126 RTF1Q92541 710 aaKnown RBP9.95□□□□□ -0.82
APP-209ENST00000440126 CALD1Q05682 793 aaKnown RBP9.95□□□□□ -0.82
APP-209ENST00000440126 ALDH1L2Q3SY69 923 aa9.95□□□□□ -0.82
APP-209ENST00000440126 PTCH1Q13635 1447 aa9.95□□□□□ -0.82
APP-209ENST00000440126 PIK3C2AO00443 1686 aa9.95□□□□□ -0.82
APP-209ENST00000440126 FLT4P35916 1363 aa9.94□□□□□ -0.82
APP-209ENST00000440126 ZBTB7BO15156 539 aaPredicted RBP9.94□□□□□ -0.82
APP-209ENST00000440126 HSPA2P54652 639 aa9.94□□□□□ -0.82
APP-209ENST00000440126 SIRT2Q8IXJ6 389 aa9.94□□□□□ -0.82
APP-209ENST00000440126 USP31Q70CQ4 1352 aa9.94□□□□□ -0.82
APP-209ENST00000440126 SLC4A2P04920 1241 aa9.94□□□□□ -0.82
APP-209ENST00000440126 BBXQ8WY36 941 aaPredicted RBP9.94□□□□□ -0.82
APP-209ENST00000440126 TTC21AQ8NDW8 1320 aa9.94□□□□□ -0.82
APP-209ENST00000440126 RRP9O43818 475 aaKnown RBP9.93□□□□□ -0.82
APP-209ENST00000440126 SBNO1A3KN83 1393 aa9.93□□□□□ -0.82
APP-209ENST00000440126 HSP90AA2PQ14568 343 aaPredicted RBP9.93□□□□□ -0.82
APP-209ENST00000440126 ARXQ96QS3 562 aa9.93□□□□□ -0.82
APP-209ENST00000440126 SLKQ9H2G2 1235 aaPredicted RBP9.93□□□□□ -0.82
APP-209ENST00000440126 CHL1O00533 1208 aa9.92□□□□□ -0.82
APP-209ENST00000440126 XRN1Q8IZH2 1706 aaKnown RBP9.92□□□□□ -0.82
APP-209ENST00000440126 NBPF6Q5VWK0 638 aa9.92□□□□□ -0.82
APP-209ENST00000440126 PROSER2Q86WR7 435 aaPredicted RBP9.92□□□□□ -0.82
APP-209ENST00000440126 NBPF4Q96M43 638 aa9.92□□□□□ -0.82
APP-209ENST00000440126 NALCNQ8IZF0 1738 aa9.92□□□□□ -0.82
APP-209ENST00000440126 ZC3H6P61129 1189 aaKnown RBP9.92□□□□□ -0.82
APP-209ENST00000440126 C16orf71Q8IYS4 520 aaPredicted RBP9.92□□□□□ -0.82
APP-209ENST00000440126 NAP1L5Q96NT1 182 aaPredicted RBP9.92□□□□□ -0.82
APP-209ENST00000440126 MEIS3Q99687 375 aa9.92□□□□□ -0.82
APP-209ENST00000440126 SMARCA5O60264 1052 aaPredicted RBP9.91□□□□□ -0.82
APP-209ENST00000440126 ANXA1P04083 346 aa9.91□□□□□ -0.82
APP-209ENST00000440126 HDAC1Q13547 482 aaPredicted RBP9.91□□□□□ -0.82
APP-209ENST00000440126 IL17REQ8NFR9 667 aa9.91□□□□□ -0.82
APP-209ENST00000440126 TULP1O00294 542 aaPredicted RBP9.91□□□□□ -0.82
APP-209ENST00000440126 CABLES1Q8TDN4 633 aa9.91□□□□□ -0.82
APP-209ENST00000440126 OTUD7AQ8TE49 926 aaPredicted RBP9.91□□□□□ -0.82
APP-209ENST00000440126 DDRGK1Q96HY6 314 aa9.91□□□□□ -0.82
APP-209ENST00000440126 LGR6Q9HBX8 967 aa9.91□□□□□ -0.82
APP-209ENST00000440126 IGSF1Q8N6C5 1336 aa9.91□□□□□ -0.82
APP-209ENST00000440126 KCNQ3O43525 872 aa9.9□□□□□ -0.82
APP-209ENST00000440126 EIF2S2P20042 333 aaKnown RBP9.9□□□□□ -0.82
APP-209ENST00000440126 SMC5Q8IY18 1101 aa9.9□□□□□ -0.82
APP-209ENST00000440126 ABCC4O15439 1325 aa9.9□□□□□ -0.82
APP-209ENST00000440126 PIK3R4Q99570 1358 aa9.9□□□□□ -0.82
APP-209ENST00000440126 MSH6P52701 1360 aa9.9□□□□□ -0.82
APP-209ENST00000440126 CRB1P82279 1406 aa9.9□□□□□ -0.82
APP-209ENST00000440126 CHD1LQ86WJ1 897 aa9.9□□□□□ -0.82
APP-209ENST00000440126 FMN2Q9NZ56 1722 aa9.89□□□□□ -0.83
APP-209ENST00000440126 MPRIPQ6WCQ1 1025 aa9.89□□□□□ -0.83
APP-209ENST00000440126 ARHGEF10O15013 1369 aa9.89□□□□□ -0.83
APP-209ENST00000440126 API5Q9BZZ5 524 aaKnown RBP9.89□□□□□ -0.83
APP-209ENST00000440126 GNAT3A8MTJ3 354 aa9.88□□□□□ -0.83
APP-209ENST00000440126 NUCB1Q02818 461 aa9.88□□□□□ -0.83
APP-209ENST00000440126 GSE1Q14687 1217 aa9.88□□□□□ -0.83
APP-209ENST00000440126 AXIN2Q9Y2T1 843 aa9.88□□□□□ -0.83
APP-209ENST00000440126 NPHP4O75161 1426 aaPredicted RBP9.88□□□□□ -0.83
APP-209ENST00000440126 FKBP5Q13451 457 aaPredicted RBP9.88□□□□□ -0.83
APP-209ENST00000440126 TSHZ3Q63HK5 1081 aa9.88□□□□□ -0.83
APP-209ENST00000440126 GAS2L2Q8NHY3 880 aa9.88□□□□□ -0.83
APP-209ENST00000440126 RGPD1P0DJD0 1748 aa9.87□□□□□ -0.83
APP-209ENST00000440126 CHD2O14647 1828 aaKnown RBP9.87□□□□□ -0.83
APP-209ENST00000440126 RGPD2P0DJD1 1756 aa9.87□□□□□ -0.83
APP-209ENST00000440126 GCP02774 474 aa9.87□□□□□ -0.83
APP-209ENST00000440126 PHAXQ9H814 394 aaKnown RBP9.87□□□□□ -0.83
APP-209ENST00000440126 MARF1Q9Y4F3 1742 aaKnown RBP9.86□□□□□ -0.83
APP-209ENST00000440126 CHRNA2Q15822 529 aa9.86□□□□□ -0.83
APP-209ENST00000440126 ARHGAP45Q92619 1136 aa9.86□□□□□ -0.83
APP-209ENST00000440126 UPF2Q9HAU5 1272 aaKnown RBP9.86□□□□□ -0.83
APP-209ENST00000440126 RGS12O14924 1447 aa9.86□□□□□ -0.83
APP-209ENST00000440126 KDRP35968 1356 aa9.86□□□□□ -0.83
APP-209ENST00000440126 ANKARQ7Z5J8 1434 aa9.86□□□□□ -0.83
APP-209ENST00000440126 PRAMEF22A3QJZ6 481 aa9.86□□□□□ -0.83
APP-209ENST00000440126 FRAT2O75474 233 aaPredicted RBP9.86□□□□□ -0.83
APP-209ENST00000440126 KRT28Q7Z3Y7 464 aa9.86□□□□□ -0.83
APP-209ENST00000440126 PLCD3Q8N3E9 789 aa9.86□□□□□ -0.83
APP-209ENST00000440126 ADGRL3Q9HAR2 1447 aa9.85□□□□□ -0.83
APP-209ENST00000440126 NFKBIBQ15653 356 aa9.85□□□□□ -0.83
APP-209ENST00000440126 ZNF530Q6P9A1 599 aaPredicted RBP9.85□□□□□ -0.83
APP-209ENST00000440126 IP6K1Q92551 441 aa9.85□□□□□ -0.83
APP-209ENST00000440126 TBC1D32Q96NH3 1257 aa9.85□□□□□ -0.83
APP-209ENST00000440126 LTN1O94822 1766 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms