RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 ZSCAN23Q3MJ62 389 aa12.15□□□□□ -0.46
CDC42SE1-202ENST00000439374 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.15□□□□□ -0.46
CDC42SE1-202ENST00000439374 CHMP4BQ9H444 224 aaKnown RBP12.15□□□□□ -0.46
CDC42SE1-202ENST00000439374 MROH2AA6NES4 1674 aa12.15□□□□□ -0.46
CDC42SE1-202ENST00000439374 UPF3BQ9BZI7 483 aaKnown RBP12.15□□□□□ -0.46
CDC42SE1-202ENST00000439374 IFT57Q9NWB7 429 aa12.15□□□□□ -0.46
CDC42SE1-202ENST00000439374 IL1RAPL2Q9NP60 686 aa12.14□□□□□ -0.47
CDC42SE1-202ENST00000439374 TULP4Q9NRJ4 1543 aa12.14□□□□□ -0.47
CDC42SE1-202ENST00000439374 MLH3Q9UHC1 1453 aa12.14□□□□□ -0.47
CDC42SE1-202ENST00000439374 INO80Q9ULG1 1556 aaPredicted RBP12.14□□□□□ -0.47
CDC42SE1-202ENST00000439374 LTKP29376 864 aa12.14□□□□□ -0.47
CDC42SE1-202ENST00000439374 AAMPQ13685 434 aa12.14□□□□□ -0.47
CDC42SE1-202ENST00000439374 ALDH1L2Q3SY69 923 aa12.14□□□□□ -0.47
CDC42SE1-202ENST00000439374 CASC1Q6TDU7 716 aa12.14□□□□□ -0.47
CDC42SE1-202ENST00000439374 LAMC1P11047 1609 aa12.14□□□□□ -0.47
CDC42SE1-202ENST00000439374 AK9Q5TCS8 1911 aa12.13□□□□□ -0.47
CDC42SE1-202ENST00000439374 TTC12Q9H892 705 aaPredicted RBP12.13□□□□□ -0.47
CDC42SE1-202ENST00000439374 CCDC9Q9Y3X0 531 aaKnown RBP12.13□□□□□ -0.47
CDC42SE1-202ENST00000439374 NEK4P51957 841 aa12.13□□□□□ -0.47
CDC42SE1-202ENST00000439374 SIRT2Q8IXJ6 389 aa12.13□□□□□ -0.47
CDC42SE1-202ENST00000439374 TTC21BQ7Z4L5 1316 aa12.13□□□□□ -0.47
CDC42SE1-202ENST00000439374 RAB3GAP1Q15042 981 aa12.13□□□□□ -0.47
CDC42SE1-202ENST00000439374 ABCA9Q8IUA7 1624 aa12.13□□□□□ -0.47
CDC42SE1-202ENST00000439374 PRR36Q9H6K5 1346 aa12.12□□□□□ -0.47
CDC42SE1-202ENST00000439374 CDC45O75419 566 aa12.12□□□□□ -0.47
CDC42SE1-202ENST00000439374 MTHFSDQ2M296 383 aaKnown RBP12.12□□□□□ -0.47
CDC42SE1-202ENST00000439374 SKOR2Q2VWA4 1001 aaPredicted RBP12.12□□□□□ -0.47
CDC42SE1-202ENST00000439374 GCC1Q96CN9 775 aa12.12□□□□□ -0.47
CDC42SE1-202ENST00000439374 ZNF692Q9BU19 519 aaPredicted RBP12.12□□□□□ -0.47
CDC42SE1-202ENST00000439374 ADGRB3O60242 1522 aa12.12□□□□□ -0.47
CDC42SE1-202ENST00000439374 USP25Q9UHP3 1055 aa12.12□□□□□ -0.47
CDC42SE1-202ENST00000439374 ZMYM3Q14202 1370 aa12.11□□□□□ -0.47
CDC42SE1-202ENST00000439374 NPHP1O15259 732 aa12.11□□□□□ -0.47
CDC42SE1-202ENST00000439374 ANO2Q9NQ90 1003 aa12.11□□□□□ -0.47
CDC42SE1-202ENST00000439374 MROH1Q8NDA8 1641 aa12.11□□□□□ -0.47
CDC42SE1-202ENST00000439374 GLI2P10070 1586 aa12.11□□□□□ -0.47
CDC42SE1-202ENST00000439374 IL16Q14005 1332 aa12.11□□□□□ -0.47
CDC42SE1-202ENST00000439374 QRICH2Q9H0J4 1663 aa12.1□□□□□ -0.47
CDC42SE1-202ENST00000439374 PUS7Q96PZ0 661 aaKnown RBP12.1□□□□□ -0.47
CDC42SE1-202ENST00000439374 MYOM1P52179 1685 aa12.1□□□□□ -0.47
CDC42SE1-202ENST00000439374 FBXW7Q969H0 707 aa12.1□□□□□ -0.47
CDC42SE1-202ENST00000439374 OFD1O75665 1012 aa12.09□□□□□ -0.47
CDC42SE1-202ENST00000439374 AIMP1Q12904 312 aaKnown RBP12.09□□□□□ -0.47
CDC42SE1-202ENST00000439374 MAP3K19Q56UN5 1328 aa12.09□□□□□ -0.47
CDC42SE1-202ENST00000439374 ADGRB1O14514 1584 aa12.09□□□□□ -0.47
CDC42SE1-202ENST00000439374 ESCO1Q5FWF5 840 aa12.09□□□□□ -0.47
CDC42SE1-202ENST00000439374 HECW2Q9P2P5 1572 aa12.09□□□□□ -0.47
CDC42SE1-202ENST00000439374 HMMRO75330 724 aa12.09□□□□□ -0.47
CDC42SE1-202ENST00000439374 PSME1Q06323 249 aa12.09□□□□□ -0.47
CDC42SE1-202ENST00000439374 ZNF592Q92610 1267 aa12.09□□□□□ -0.47
CDC42SE1-202ENST00000439374 TRERF1Q96PN7 1200 aa12.09□□□□□ -0.47
CDC42SE1-202ENST00000439374 NUTM1Q86Y26 1132 aa12.08□□□□□ -0.48
CDC42SE1-202ENST00000439374 ARAP3Q8WWN8 1544 aa12.08□□□□□ -0.48
CDC42SE1-202ENST00000439374 EYA1Q99502 592 aa12.08□□□□□ -0.48
CDC42SE1-202ENST00000439374 TMEM63CQ9P1W3 806 aa12.08□□□□□ -0.48
CDC42SE1-202ENST00000439374 FIBPO43427 364 aa12.07□□□□□ -0.48
CDC42SE1-202ENST00000439374 BMP2KLQ5H9B9 411 aa12.07□□□□□ -0.48
CDC42SE1-202ENST00000439374 SDSP20132 328 aa12.07□□□□□ -0.48
CDC42SE1-202ENST00000439374 PLEKHM2Q8IWE5 1019 aa12.07□□□□□ -0.48
CDC42SE1-202ENST00000439374 FRMPD1Q5SYB0 1578 aa12.07□□□□□ -0.48
CDC42SE1-202ENST00000439374 RIMBP3CA6NJZ7 1639 aa12.07□□□□□ -0.48
CDC42SE1-202ENST00000439374 RIMBP3BA6NNM3 1639 aa12.07□□□□□ -0.48
CDC42SE1-202ENST00000439374 RIMBP3Q9UFD9 1639 aa12.07□□□□□ -0.48
CDC42SE1-202ENST00000439374 SURF6O75683 361 aaKnown RBP12.07□□□□□ -0.48
CDC42SE1-202ENST00000439374 KIAA2012Q0VF49 1180 aa12.07□□□□□ -0.48
CDC42SE1-202ENST00000439374 DRC7Q8IY82 874 aa12.07□□□□□ -0.48
CDC42SE1-202ENST00000439374 VWDEQ8N2E2 1590 aa12.06□□□□□ -0.48
CDC42SE1-202ENST00000439374 NLRP1Q9C000 1473 aa12.06□□□□□ -0.48
CDC42SE1-202ENST00000439374 GSPT1P15170 499 aaKnown RBP12.06□□□□□ -0.48
CDC42SE1-202ENST00000439374 KLHL40Q2TBA0 621 aa12.06□□□□□ -0.48
CDC42SE1-202ENST00000439374 HDGFL1Q5TGJ6 251 aa12.06□□□□□ -0.48
CDC42SE1-202ENST00000439374 GPT2Q8TD30 523 aa12.06□□□□□ -0.48
CDC42SE1-202ENST00000439374 A0A0G2JS52 829 aa12.06□□□□□ -0.48
CDC42SE1-202ENST00000439374 ST18O60284 1047 aa12.06□□□□□ -0.48
CDC42SE1-202ENST00000439374 HAP1P54257 671 aaPredicted RBP12.06□□□□□ -0.48
CDC42SE1-202ENST00000439374 INTS3Q68E01 1043 aaKnown RBP12.06□□□□□ -0.48
CDC42SE1-202ENST00000439374 VGLL3A8MV65 326 aa12.05□□□□□ -0.48
CDC42SE1-202ENST00000439374 TEFQ10587 303 aa12.05□□□□□ -0.48
CDC42SE1-202ENST00000439374 MPRIPQ6WCQ1 1025 aa12.05□□□□□ -0.48
CDC42SE1-202ENST00000439374 KIF2CQ99661 725 aa12.05□□□□□ -0.48
CDC42SE1-202ENST00000439374 LRRFIP2Q9Y608 721 aaKnown RBP12.05□□□□□ -0.48
CDC42SE1-202ENST00000439374 ROBO2Q9HCK4 1378 aa12.05□□□□□ -0.48
CDC42SE1-202ENST00000439374 FOSBP53539 338 aa12.05□□□□□ -0.48
CDC42SE1-202ENST00000439374 LRRC59Q96AG4 307 aaKnown RBP12.05□□□□□ -0.48
CDC42SE1-202ENST00000439374 NRXN1Q9ULB1 1477 aa12.05□□□□□ -0.48
CDC42SE1-202ENST00000439374 HCLS1P14317 486 aaPredicted RBP12.05□□□□□ -0.48
CDC42SE1-202ENST00000439374 KCNA6P17658 529 aa12.05□□□□□ -0.48
CDC42SE1-202ENST00000439374 PPP4R3BQ5MIZ7 849 aa12.05□□□□□ -0.48
CDC42SE1-202ENST00000439374 CEP85Q6P2H3 762 aa12.05□□□□□ -0.48
CDC42SE1-202ENST00000439374 CAMSAP1Q5T5Y3 1602 aa12.04□□□□□ -0.48
CDC42SE1-202ENST00000439374 TNRQ92752 1358 aa12.04□□□□□ -0.48
CDC42SE1-202ENST00000439374 GADD45BO75293 160 aaPredicted RBP12.04□□□□□ -0.48
CDC42SE1-202ENST00000439374 GNAI2P04899 355 aa12.04□□□□□ -0.48
CDC42SE1-202ENST00000439374 PHAXQ9H814 394 aaKnown RBP12.04□□□□□ -0.48
CDC42SE1-202ENST00000439374 ZNF330Q9Y3S2 320 aaPredicted RBP12.04□□□□□ -0.48
CDC42SE1-202ENST00000439374 DEPDC5O75140 1603 aa12.04□□□□□ -0.48
CDC42SE1-202ENST00000439374 KCNJ4P48050 445 aa12.04□□□□□ -0.48
CDC42SE1-202ENST00000439374 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.04□□□□□ -0.487e-17■■■□□ 16.2
CDC42SE1-202ENST00000439374 NEO1Q92859 1461 aa12.04□□□□□ -0.48
CDC42SE1-202ENST00000439374 PPFIA3O75145 1194 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms