RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 ANTXR1Q9H6X2 564 aa15.18■□□□□ 0.02
HDAC8-214ENST00000439122 KIAA0232Q92628 1395 aa15.18■□□□□ 0.02
HDAC8-214ENST00000439122 INTS3Q68E01 1043 aaKnown RBP15.17■□□□□ 0.02
HDAC8-214ENST00000439122 KIF24Q5T7B8 1368 aa15.17■□□□□ 0.02
HDAC8-214ENST00000439122 KCNA6P17658 529 aa15.17■□□□□ 0.02
HDAC8-214ENST00000439122 NUTM2GQ5VZR2 741 aa15.17■□□□□ 0.02
HDAC8-214ENST00000439122 EYA1Q99502 592 aa15.17■□□□□ 0.02
HDAC8-214ENST00000439122 FMN2Q9NZ56 1722 aa15.16■□□□□ 0.02
HDAC8-214ENST00000439122 CRB1P82279 1406 aa15.16■□□□□ 0.02
HDAC8-214ENST00000439122 TSPYL4Q9UJ04 414 aa15.16■□□□□ 0.02
HDAC8-214ENST00000439122 SLC4A2P04920 1241 aa15.15■□□□□ 0.02
HDAC8-214ENST00000439122 PTPRCP08575 1304 aa15.15■□□□□ 0.02
HDAC8-214ENST00000439122 RIMS1Q86UR5 1692 aaKnown RBP15.15■□□□□ 0.02
HDAC8-214ENST00000439122 PIK3C2AO00443 1686 aa15.14■□□□□ 0.01
HDAC8-214ENST00000439122 KDRP35968 1356 aa15.14■□□□□ 0.01
HDAC8-214ENST00000439122 RGS12O14924 1447 aa15.14■□□□□ 0.01
HDAC8-214ENST00000439122 GAS2L2Q8NHY3 880 aa15.14■□□□□ 0.01
HDAC8-214ENST00000439122 IGSF1Q8N6C5 1336 aa15.14■□□□□ 0.01
HDAC8-214ENST00000439122 CEP170BQ9Y4F5 1589 aaPredicted RBP15.13■□□□□ 0.01
HDAC8-214ENST00000439122 RBM25P49756 843 aaKnown RBP15.13■□□□□ 0.01
HDAC8-214ENST00000439122 HSCBQ8IWL3 235 aa15.13■□□□□ 0.01
HDAC8-214ENST00000439122 ABTB2Q8N961 1025 aa15.13■□□□□ 0.01
HDAC8-214ENST00000439122 DCTPP1Q9H773 170 aa15.13■□□□□ 0.01
HDAC8-214ENST00000439122 MSH6P52701 1360 aa15.13■□□□□ 0.01
HDAC8-214ENST00000439122 XRN1Q8IZH2 1706 aaKnown RBP15.13■□□□□ 0.01
HDAC8-214ENST00000439122 ANKARQ7Z5J8 1434 aa15.12■□□□□ 0.01
HDAC8-214ENST00000439122 TBC1D9Q6ZT07 1266 aa15.12■□□□□ 0.01
HDAC8-214ENST00000439122 C14orf37Q86TY3 774 aa15.12■□□□□ 0.01
HDAC8-214ENST00000439122 ANKRD44Q8N8A2 993 aa15.12■□□□□ 0.01
HDAC8-214ENST00000439122 HOXC9P31274 260 aa15.11■□□□□ 0.01
HDAC8-214ENST00000439122 RPAP2Q8IXW5 612 aaPredicted RBP15.11■□□□□ 0.01
HDAC8-214ENST00000439122 LTV1Q96GA3 475 aaPredicted RBP15.11■□□□□ 0.01
HDAC8-214ENST00000439122 MEIS3Q99687 375 aa15.11■□□□□ 0.01
HDAC8-214ENST00000439122 TRHP20396 242 aaPredicted RBP15.1■□□□□ 0.01
HDAC8-214ENST00000439122 CEP85Q6P2H3 762 aa15.1■□□□□ 0.01
HDAC8-214ENST00000439122 SLC4A10Q6U841 1118 aa15.1■□□□□ 0.01
HDAC8-214ENST00000439122 ATP10DQ9P241 1426 aa15.1■□□□□ 0.01
HDAC8-214ENST00000439122 PLEKHM2Q8IWE5 1019 aa15.1■□□□□ 0.01
HDAC8-214ENST00000439122 RTL1A6NKG5 1358 aa15.09■□□□□ 0.01
HDAC8-214ENST00000439122 G2E3Q7L622 706 aa15.09■□□□□ 0.01
HDAC8-214ENST00000439122 GNAT3A8MTJ3 354 aa15.09■□□□□ 0.01
HDAC8-214ENST00000439122 F6X3S4 739 aa15.09■□□□□ 0.01
HDAC8-214ENST00000439122 APBB1O00213 710 aa15.09■□□□□ 0.01
HDAC8-214ENST00000439122 CDC45O75419 566 aa15.08■□□□□ 0
HDAC8-214ENST00000439122 GSPT1P15170 499 aaKnown RBP15.08■□□□□ 0
HDAC8-214ENST00000439122 C16orf71Q8IYS4 520 aaPredicted RBP15.08■□□□□ 0
HDAC8-214ENST00000439122 HTATSF1O43719 755 aaKnown RBP15.08■□□□□ 0
HDAC8-214ENST00000439122 RBM33Q96EV2 1170 aaKnown RBP15.08■□□□□ 0
HDAC8-214ENST00000439122 STK31Q9BXU1 1019 aa15.08■□□□□ 0
HDAC8-214ENST00000439122 CHMP5Q9NZZ3 219 aa15.07■□□□□ 0
HDAC8-214ENST00000439122 SNX21Q969T3 373 aa15.06■□□□□ 0
HDAC8-214ENST00000439122 CCT4P50991 539 aaKnown RBP15.06■□□□□ 0
HDAC8-214ENST00000439122 PHF8Q9UPP1 1060 aa15.06■□□□□ 0
HDAC8-214ENST00000439122 SMARCA5O60264 1052 aaPredicted RBP15.05■□□□□ 0
HDAC8-214ENST00000439122 TTC22Q5TAA0 569 aa15.05■□□□□ 0
HDAC8-214ENST00000439122 ANKLE2Q86XL3 938 aa15.05■□□□□ 0
HDAC8-214ENST00000439122 OTUD7AQ8TE49 926 aaPredicted RBP15.05■□□□□ 0
HDAC8-214ENST00000439122 NECTIN2Q92692 538 aa15.05■□□□□ 0
HDAC8-214ENST00000439122 KIF2CQ99661 725 aa15.05■□□□□ 0
HDAC8-214ENST00000439122 HMMRO75330 724 aa15.05■□□□□ -0
HDAC8-214ENST00000439122 USHBP1Q8N6Y0 703 aa15.05■□□□□ -0
HDAC8-214ENST00000439122 MARF1Q9Y4F3 1742 aaKnown RBP15.05■□□□□ -0
HDAC8-214ENST00000439122 HSP90AB1P08238 724 aaKnown RBP15.04■□□□□ -0
HDAC8-214ENST00000439122 CCDC30Q5VVM6 783 aa15.04■□□□□ -0
HDAC8-214ENST00000439122 MAP3K5Q99683 1374 aa15.04■□□□□ -0
HDAC8-214ENST00000439122 FKBP5Q13451 457 aaPredicted RBP15.04■□□□□ -0
HDAC8-214ENST00000439122 IL27Q8NEV9 243 aa15.04■□□□□ -0
HDAC8-214ENST00000439122 IL17REQ8NFR9 667 aa15.04■□□□□ -0
HDAC8-214ENST00000439122 FLIIQ13045 1269 aa15.03■□□□□ -0
HDAC8-214ENST00000439122 NWD1Q149M9 1564 aa15.03■□□□□ -0
HDAC8-214ENST00000439122 MCM4P33991 863 aa15.02■□□□□ -0
HDAC8-214ENST00000439122 TAF7Q15545 349 aaPredicted RBP15.02■□□□□ -0
HDAC8-214ENST00000439122 ESCO1Q5FWF5 840 aa15.02■□□□□ -0
HDAC8-214ENST00000439122 ZBTB7CA1YPR0 619 aa15.01□□□□□ -0.01
HDAC8-214ENST00000439122 GNAI2P04899 355 aa15.01□□□□□ -0.01
HDAC8-214ENST00000439122 HSP90AA1P07900 732 aaKnown RBP15.01□□□□□ -0.01
HDAC8-214ENST00000439122 PSME1Q06323 249 aa15.01□□□□□ -0.01
HDAC8-214ENST00000439122 BRPF3Q9ULD4 1205 aa15.01□□□□□ -0.01
HDAC8-214ENST00000439122 EIF5BO60841 1220 aaKnown RBP15.01□□□□□ -0.01
HDAC8-214ENST00000439122 RBM42Q9BTD8 480 aaKnown RBP15.01□□□□□ -0.01
HDAC8-214ENST00000439122 NCOA3Q9Y6Q9 1424 aa15.01□□□□□ -0.01
HDAC8-214ENST00000439122 LRRC37A3O60309 1634 aa15.01□□□□□ -0.01
HDAC8-214ENST00000439122 CD2BP2O95400 341 aaKnown RBP15□□□□□ -0.01
HDAC8-214ENST00000439122 CHD2O14647 1828 aaKnown RBP15□□□□□ -0.01
HDAC8-214ENST00000439122 SDSP20132 328 aa15□□□□□ -0.01
HDAC8-214ENST00000439122 IP6K1Q92551 441 aa15□□□□□ -0.01
HDAC8-214ENST00000439122 USP54Q70EL1 1684 aa15□□□□□ -0.01
HDAC8-214ENST00000439122 SETD1BQ9UPS6 1966 aaKnown RBP15□□□□□ -0.01
HDAC8-214ENST00000439122 CASC1Q6TDU7 716 aa14.99□□□□□ -0.01
HDAC8-214ENST00000439122 LTN1O94822 1766 aa14.99□□□□□ -0.01
HDAC8-214ENST00000439122 K7ELQ4 463 aaPredicted RBP14.98□□□□□ -0.01
HDAC8-214ENST00000439122 GNAI3P08754 354 aa14.98□□□□□ -0.01
HDAC8-214ENST00000439122 DDIT3P35638 169 aa14.98□□□□□ -0.01
HDAC8-214ENST00000439122 FOXD4L1Q9NU39 408 aa14.98□□□□□ -0.01
HDAC8-214ENST00000439122 BABAM1Q9NWV8 329 aa14.98□□□□□ -0.01
HDAC8-214ENST00000439122 EXOC6BQ9Y2D4 811 aa14.98□□□□□ -0.01
HDAC8-214ENST00000439122 PLEKHG5O94827 1062 aa14.98□□□□□ -0.01
HDAC8-214ENST00000439122 NBPF6Q5VWK0 638 aa14.98□□□□□ -0.01
HDAC8-214ENST00000439122 NBPF4Q96M43 638 aa14.98□□□□□ -0.01
HDAC8-214ENST00000439122 FAM208AQ9UK61 1670 aaKnown RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms