RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 MCM4P33991 863 aa12.99□□□□□ -0.33
CLSTN1-203ENST00000435891 HSCBQ8IWL3 235 aa12.99□□□□□ -0.33
CLSTN1-203ENST00000435891 PLEKHG3A1L390 1219 aa12.99□□□□□ -0.33
CLSTN1-203ENST00000435891 CHMP5Q9NZZ3 219 aa12.99□□□□□ -0.33
CLSTN1-203ENST00000435891 OTUD7AQ8TE49 926 aaPredicted RBP12.98□□□□□ -0.33
CLSTN1-203ENST00000435891 GZF1Q9H116 711 aaPredicted RBP12.98□□□□□ -0.33
CLSTN1-203ENST00000435891 MAP3K19Q56UN5 1328 aa12.98□□□□□ -0.33
CLSTN1-203ENST00000435891 CHMP4BQ9H444 224 aaKnown RBP12.98□□□□□ -0.33
CLSTN1-203ENST00000435891 INTS3Q68E01 1043 aaKnown RBP12.97□□□□□ -0.33
CLSTN1-203ENST00000435891 PLEKHM2Q8IWE5 1019 aa12.97□□□□□ -0.33
CLSTN1-203ENST00000435891 ATP10DQ9P241 1426 aa12.97□□□□□ -0.33
CLSTN1-203ENST00000435891 DDIT3P35638 169 aa12.97□□□□□ -0.33
CLSTN1-203ENST00000435891 MEIS3Q99687 375 aa12.97□□□□□ -0.33
CLSTN1-203ENST00000435891 FOXD4L1Q9NU39 408 aa12.97□□□□□ -0.33
CLSTN1-203ENST00000435891 APBB1O00213 710 aa12.96□□□□□ -0.33
CLSTN1-203ENST00000435891 DCTPP1Q9H773 170 aa12.96□□□□□ -0.33
CLSTN1-203ENST00000435891 MSH6P52701 1360 aa12.96□□□□□ -0.33
CLSTN1-203ENST00000435891 NCOA3Q9Y6Q9 1424 aa12.96□□□□□ -0.33
CLSTN1-203ENST00000435891 TOPAZ1Q8N9V7 1692 aa12.96□□□□□ -0.33
CLSTN1-203ENST00000435891 MTHFSDQ2M296 383 aaKnown RBP12.96□□□□□ -0.33
CLSTN1-203ENST00000435891 RIMS1Q86UR5 1692 aaKnown RBP12.96□□□□□ -0.34
CLSTN1-203ENST00000435891 PLEKHG1Q9ULL1 1385 aa12.96□□□□□ -0.34
CLSTN1-203ENST00000435891 AMOTL2Q9Y2J4 779 aa12.96□□□□□ -0.34
CLSTN1-203ENST00000435891 SSH2Q76I76 1423 aa12.96□□□□□ -0.34
CLSTN1-203ENST00000435891 SMARCA5O60264 1052 aaPredicted RBP12.95□□□□□ -0.34
CLSTN1-203ENST00000435891 G2E3Q7L622 706 aa12.95□□□□□ -0.34
CLSTN1-203ENST00000435891 SNX21Q969T3 373 aa12.95□□□□□ -0.34
CLSTN1-203ENST00000435891 CRB1P82279 1406 aa12.95□□□□□ -0.34
CLSTN1-203ENST00000435891 USP31Q70CQ4 1352 aa12.95□□□□□ -0.34
CLSTN1-203ENST00000435891 SLC4A2P04920 1241 aa12.95□□□□□ -0.34
CLSTN1-203ENST00000435891 CEP85Q6P2H3 762 aa12.95□□□□□ -0.34
CLSTN1-203ENST00000435891 F6X3S4 739 aa12.94□□□□□ -0.34
CLSTN1-203ENST00000435891 ANKRD44Q8N8A2 993 aa12.94□□□□□ -0.34
CLSTN1-203ENST00000435891 RGPD1P0DJD0 1748 aa12.94□□□□□ -0.34
CLSTN1-203ENST00000435891 RTL1A6NKG5 1358 aa12.94□□□□□ -0.34
CLSTN1-203ENST00000435891 NALCNQ8IZF0 1738 aa12.93□□□□□ -0.34
CLSTN1-203ENST00000435891 NUTM2GQ5VZR2 741 aa12.93□□□□□ -0.34
CLSTN1-203ENST00000435891 TRAK2O60296 914 aa12.93□□□□□ -0.34
CLSTN1-203ENST00000435891 HSP90AB1P08238 724 aaKnown RBP12.93□□□□□ -0.34
CLSTN1-203ENST00000435891 EYA1Q99502 592 aa12.93□□□□□ -0.34
CLSTN1-203ENST00000435891 RRAGDQ9NQL2 400 aaPredicted RBP12.93□□□□□ -0.34
CLSTN1-203ENST00000435891 KIAA0232Q92628 1395 aa12.93□□□□□ -0.34
CLSTN1-203ENST00000435891 CDC45O75419 566 aa12.92□□□□□ -0.34
CLSTN1-203ENST00000435891 KIF24Q5T7B8 1368 aa12.92□□□□□ -0.34
CLSTN1-203ENST00000435891 CEP170BQ9Y4F5 1589 aaPredicted RBP12.92□□□□□ -0.34
CLSTN1-203ENST00000435891 TTC22Q5TAA0 569 aa12.92□□□□□ -0.34
CLSTN1-203ENST00000435891 SLC4A10Q6U841 1118 aa12.92□□□□□ -0.34
CLSTN1-203ENST00000435891 NGDNQ8NEJ9 315 aaKnown RBP12.92□□□□□ -0.34
CLSTN1-203ENST00000435891 TNPO1Q92973 898 aaKnown RBP12.92□□□□□ -0.34
CLSTN1-203ENST00000435891 TSPYL4Q9UJ04 414 aa12.92□□□□□ -0.34
CLSTN1-203ENST00000435891 RGPD8O14715 1765 aaPredicted RBP12.92□□□□□ -0.34
CLSTN1-203ENST00000435891 RRP9O43818 475 aaKnown RBP12.91□□□□□ -0.34
CLSTN1-203ENST00000435891 GAS2L2Q8NHY3 880 aa12.9□□□□□ -0.34
CLSTN1-203ENST00000435891 XRCC6P12956 609 aaKnown RBP eCLIP12.9□□□□□ -0.34
CLSTN1-203ENST00000435891 PTPRCP08575 1304 aa12.9□□□□□ -0.34
CLSTN1-203ENST00000435891 AMPHP49418 695 aa12.9□□□□□ -0.34
CLSTN1-203ENST00000435891 RBM10P98175 930 aaKnown RBP12.9□□□□□ -0.34
CLSTN1-203ENST00000435891 RPAP2Q8IXW5 612 aaPredicted RBP12.9□□□□□ -0.34
CLSTN1-203ENST00000435891 NECTIN2Q92692 538 aa12.9□□□□□ -0.34
CLSTN1-203ENST00000435891 PANK2Q9BZ23 570 aa12.9□□□□□ -0.34
CLSTN1-203ENST00000435891 EID1Q9Y6B2 187 aa12.9□□□□□ -0.34
CLSTN1-203ENST00000435891 ARHGEF10O15013 1369 aa12.9□□□□□ -0.35
CLSTN1-203ENST00000435891 FLT4P35916 1363 aa12.9□□□□□ -0.35
CLSTN1-203ENST00000435891 SDSP20132 328 aa12.89□□□□□ -0.35
CLSTN1-203ENST00000435891 K7ELQ4 463 aaPredicted RBP12.89□□□□□ -0.35
CLSTN1-203ENST00000435891 RTF1Q92541 710 aaKnown RBP12.89□□□□□ -0.35
CLSTN1-203ENST00000435891 SBNO1A3KN83 1393 aa12.89□□□□□ -0.35
CLSTN1-203ENST00000435891 FSD2A1L4K1 749 aa12.89□□□□□ -0.35
CLSTN1-203ENST00000435891 KDRP35968 1356 aa12.89□□□□□ -0.35
CLSTN1-203ENST00000435891 IGSF1Q8N6C5 1336 aa12.88□□□□□ -0.35
CLSTN1-203ENST00000435891 TTC21AQ8NDW8 1320 aa12.88□□□□□ -0.35
CLSTN1-203ENST00000435891 NLRP6P59044 892 aa12.88□□□□□ -0.35
CLSTN1-203ENST00000435891 ARID3AQ99856 593 aa12.88□□□□□ -0.35
CLSTN1-203ENST00000435891 RAB3GAP1Q15042 981 aa12.88□□□□□ -0.35
CLSTN1-203ENST00000435891 HAP1P54257 671 aaPredicted RBP12.87□□□□□ -0.35
CLSTN1-203ENST00000435891 TSHZ3Q63HK5 1081 aa12.87□□□□□ -0.35
CLSTN1-203ENST00000435891 USP26Q9BXU7 913 aa12.87□□□□□ -0.35
CLSTN1-203ENST00000435891 TBX22Q9Y458 520 aa12.87□□□□□ -0.35
CLSTN1-203ENST00000435891 PIK3C2AO00443 1686 aa12.87□□□□□ -0.35
CLSTN1-203ENST00000435891 DIP2AQ14689 1571 aa12.87□□□□□ -0.35
CLSTN1-203ENST00000435891 FMN2Q9NZ56 1722 aa12.87□□□□□ -0.35
CLSTN1-203ENST00000435891 GOLGA6L3A6NEY3 463 aa12.87□□□□□ -0.35
CLSTN1-203ENST00000435891 LTV1Q96GA3 475 aaPredicted RBP12.87□□□□□ -0.35
CLSTN1-203ENST00000435891 SSFA2P28290 1259 aa12.86□□□□□ -0.35
CLSTN1-203ENST00000435891 KCNA6P17658 529 aa12.86□□□□□ -0.35
CLSTN1-203ENST00000435891 L1TD1Q5T7N2 865 aaKnown RBP12.86□□□□□ -0.35
CLSTN1-203ENST00000435891 EXOC6BQ9Y2D4 811 aa12.86□□□□□ -0.35
CLSTN1-203ENST00000435891 RBM33Q96EV2 1170 aaKnown RBP12.85□□□□□ -0.35
CLSTN1-203ENST00000435891 DDX11L8A8MPP1 907 aa12.85□□□□□ -0.35
CLSTN1-203ENST00000435891 USHBP1Q8N6Y0 703 aa12.85□□□□□ -0.35
CLSTN1-203ENST00000435891 ARHGAP23Q9P227 1491 aa12.85□□□□□ -0.35
CLSTN1-203ENST00000435891 HOXC9P31274 260 aa12.85□□□□□ -0.35
CLSTN1-203ENST00000435891 IL17REQ8NFR9 667 aa12.85□□□□□ -0.35
CLSTN1-203ENST00000435891 CIZ1Q9ULV3 898 aaPredicted RBP12.85□□□□□ -0.35
CLSTN1-203ENST00000435891 AK9Q5TCS8 1911 aa12.84□□□□□ -0.35
CLSTN1-203ENST00000435891 SLIT1O75093 1534 aa12.84□□□□□ -0.35
CLSTN1-203ENST00000435891 FLIIQ13045 1269 aa12.84□□□□□ -0.35
CLSTN1-203ENST00000435891 PNMA6EA0A0J9YXQ4 647 aa12.83□□□□□ -0.36
CLSTN1-203ENST00000435891 FKBP5Q13451 457 aaPredicted RBP12.83□□□□□ -0.36
CLSTN1-203ENST00000435891 PDE1AP54750 535 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms