RNA–Protein interactions for RNA: ENST00000434436.7

MBD3-202, Transcript of methyl-CpG binding domain protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MBD3, Length 2,439 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-202ENST00000434436 SLC4A3P48751 1232 aa30.03■■■□□ 2.4
MBD3-202ENST00000434436 C14orf37Q86TY3 774 aa30.02■■■□□ 2.4
MBD3-202ENST00000434436 GAS2L2Q8NHY3 880 aa30.02■■■□□ 2.4
MBD3-202ENST00000434436 C1orf115Q9H7X2 142 aa30.02■■■□□ 2.4
MBD3-202ENST00000434436 LTN1O94822 1766 aa30.02■■■□□ 2.4
MBD3-202ENST00000434436 RTF1Q92541 710 aaKnown RBP30.02■■■□□ 2.4
MBD3-202ENST00000434436 MIS18AQ9NYP9 233 aa30.01■■■□□ 2.39
MBD3-202ENST00000434436 HAP1P54257 671 aaPredicted RBP30.01■■■□□ 2.39
MBD3-202ENST00000434436 NUCB1Q02818 461 aa30■■■□□ 2.39
MBD3-202ENST00000434436 ESCO1Q5FWF5 840 aa29.99■■■□□ 2.39
MBD3-202ENST00000434436 RGS12O14924 1447 aa29.99■■■□□ 2.39
MBD3-202ENST00000434436 RTL1A6NKG5 1358 aa29.97■■■□□ 2.39
MBD3-202ENST00000434436 NFAT5O94916 1531 aa29.97■■■□□ 2.39
MBD3-202ENST00000434436 LRRC37A3O60309 1634 aa29.97■■■□□ 2.39
MBD3-202ENST00000434436 SIRT2Q8IXJ6 389 aa29.97■■■□□ 2.39
MBD3-202ENST00000434436 LTV1Q96GA3 475 aaPredicted RBP29.97■■■□□ 2.39
MBD3-202ENST00000434436 TSPYL4Q9UJ04 414 aa29.96■■■□□ 2.39
MBD3-202ENST00000434436 HTATSF1O43719 755 aaKnown RBP29.95■■■□□ 2.38
MBD3-202ENST00000434436 PSME1Q06323 249 aa29.95■■■□□ 2.38
MBD3-202ENST00000434436 INTS3Q68E01 1043 aaKnown RBP29.95■■■□□ 2.38
MBD3-202ENST00000434436 CHD1LQ86WJ1 897 aa29.93■■■□□ 2.38
MBD3-202ENST00000434436 LNPKQ9C0E8 428 aa29.93■■■□□ 2.38
MBD3-202ENST00000434436 DAXXQ9UER7 740 aaPredicted RBP29.93■■■□□ 2.38
MBD3-202ENST00000434436 IP6K1Q92551 441 aa29.92■■■□□ 2.38
MBD3-202ENST00000434436 GNAT3A8MTJ3 354 aa29.92■■■□□ 2.38
MBD3-202ENST00000434436 GCC1Q96CN9 775 aa29.92■■■□□ 2.38
MBD3-202ENST00000434436 ORAI2Q96SN7 254 aa29.9■■■□□ 2.38
MBD3-202ENST00000434436 PTPRCP08575 1304 aa29.9■■■□□ 2.38
MBD3-202ENST00000434436 USHBP1Q8N6Y0 703 aa29.9■■■□□ 2.38
MBD3-202ENST00000434436 MSH6P52701 1360 aa29.89■■■□□ 2.38
MBD3-202ENST00000434436 TBC1D32Q96NH3 1257 aa29.89■■■□□ 2.38
MBD3-202ENST00000434436 SLC4A2P04920 1241 aa29.88■■■□□ 2.37
MBD3-202ENST00000434436 MAP3K5Q99683 1374 aa29.88■■■□□ 2.37
MBD3-202ENST00000434436 UPF2Q9HAU5 1272 aaKnown RBP29.87■■■□□ 2.37
MBD3-202ENST00000434436 ANKRD45Q5TZF3 282 aa29.87■■■□□ 2.37
MBD3-202ENST00000434436 IL17REQ8NFR9 667 aa29.87■■■□□ 2.37
MBD3-202ENST00000434436 PHRF1Q9P1Y6 1649 aaKnown RBP29.85■■■□□ 2.37
MBD3-202ENST00000434436 KCNH5Q8NCM2 988 aa29.85■■■□□ 2.37
MBD3-202ENST00000434436 G2E3Q7L622 706 aa29.84■■■□□ 2.37
MBD3-202ENST00000434436 RGPD2P0DJD1 1756 aa29.84■■■□□ 2.37
MBD3-202ENST00000434436 NBPF6Q5VWK0 638 aa29.83■■■□□ 2.37
MBD3-202ENST00000434436 NBPF4Q96M43 638 aa29.83■■■□□ 2.37
MBD3-202ENST00000434436 XPCQ01831 940 aaPredicted RBP29.83■■■□□ 2.37
MBD3-202ENST00000434436 RTL5Q5HYW3 569 aaPredicted RBP29.82■■■□□ 2.36
MBD3-202ENST00000434436 ATP10DQ9P241 1426 aa29.82■■■□□ 2.36
MBD3-202ENST00000434436 PROSER2Q86WR7 435 aaPredicted RBP29.81■■■□□ 2.36
MBD3-202ENST00000434436 ZBTB7CA1YPR0 619 aa29.8■■■□□ 2.36
MBD3-202ENST00000434436 SLIT3O75094 1523 aa29.79■■■□□ 2.36
MBD3-202ENST00000434436 FAM208AQ9UK61 1670 aaKnown RBP29.79■■■□□ 2.36
MBD3-202ENST00000434436 TRPM3Q9HCF6 1732 aaPredicted RBP29.79■■■□□ 2.36
MBD3-202ENST00000434436 ANKRD44Q8N8A2 993 aa29.79■■■□□ 2.36
MBD3-202ENST00000434436 TAF7Q15545 349 aaPredicted RBP29.78■■■□□ 2.36
MBD3-202ENST00000434436 DCTPP1Q9H773 170 aa29.77■■■□□ 2.36
MBD3-202ENST00000434436 GCP02774 474 aa29.77■■■□□ 2.36
MBD3-202ENST00000434436 MEIS3Q99687 375 aa29.77■■■□□ 2.36
MBD3-202ENST00000434436 MFAP1P55081 439 aaKnown RBP29.76■■■□□ 2.36
MBD3-202ENST00000434436 BABAM1Q9NWV8 329 aa29.76■■■□□ 2.36
MBD3-202ENST00000434436 BMP2KLQ5H9B9 411 aa29.76■■■□□ 2.35
MBD3-202ENST00000434436 CEP85Q6P2H3 762 aa29.75■■■□□ 2.35
MBD3-202ENST00000434436 ARHGEF25Q86VW2 580 aa29.75■■■□□ 2.35
MBD3-202ENST00000434436 F6X3S4 739 aa29.75■■■□□ 2.35
MBD3-202ENST00000434436 LRRC59Q96AG4 307 aaKnown RBP29.75■■■□□ 2.35
MBD3-202ENST00000434436 C1orf167Q5SNV9 1468 aa29.75■■■□□ 2.35
MBD3-202ENST00000434436 RPAP2Q8IXW5 612 aaPredicted RBP29.74■■■□□ 2.35
MBD3-202ENST00000434436 CACNA1FO60840 1977 aa29.74■■■□□ 2.35
MBD3-202ENST00000434436 CEMIPQ8WUJ3 1361 aa29.73■■■□□ 2.35
MBD3-202ENST00000434436 BECN1Q14457 450 aa29.73■■■□□ 2.35
MBD3-202ENST00000434436 STK31Q9BXU1 1019 aa29.73■■■□□ 2.35
MBD3-202ENST00000434436 C22orf23Q9BZE7 217 aa29.73■■■□□ 2.35
MBD3-202ENST00000434436 USP35Q9P2H5 1018 aa29.73■■■□□ 2.35
MBD3-202ENST00000434436 CCDC30Q5VVM6 783 aa29.72■■■□□ 2.35
MBD3-202ENST00000434436 KIF1AQ12756 1690 aa29.72■■■□□ 2.35
MBD3-202ENST00000434436 PLEKHG5O94827 1062 aa29.72■■■□□ 2.35
MBD3-202ENST00000434436 KRT28Q7Z3Y7 464 aa29.72■■■□□ 2.35
MBD3-202ENST00000434436 C19orf44Q9H6X5 657 aa29.71■■■□□ 2.35
MBD3-202ENST00000434436 MED1Q15648 1581 aaPredicted RBP29.71■■■□□ 2.35
MBD3-202ENST00000434436 SOS1Q07889 1333 aaPredicted RBP29.71■■■□□ 2.35
MBD3-202ENST00000434436 LMOD2Q6P5Q4 547 aa29.71■■■□□ 2.35
MBD3-202ENST00000434436 SLC4A10Q6U841 1118 aa29.71■■■□□ 2.35
MBD3-202ENST00000434436 CCT4P50991 539 aaKnown RBP29.7■■■□□ 2.35
MBD3-202ENST00000434436 NECTIN2Q92692 538 aa29.7■■■□□ 2.35
MBD3-202ENST00000434436 FLIIQ13045 1269 aa29.69■■■□□ 2.34
MBD3-202ENST00000434436 LGR6Q9HBX8 967 aa29.69■■■□□ 2.34
MBD3-202ENST00000434436 LMO7Q8WWI1 1683 aa29.69■■■□□ 2.34
MBD3-202ENST00000434436 DEKP35659 375 aaKnown RBP29.69■■■□□ 2.34
MBD3-202ENST00000434436 NCAPD2Q15021 1401 aa29.68■■■□□ 2.34
MBD3-202ENST00000434436 NFKBIBQ15653 356 aa29.67■■■□□ 2.34
MBD3-202ENST00000434436 TBC1D2Q9BYX2 928 aa29.66■■■□□ 2.34
MBD3-202ENST00000434436 STRCP1A6NGW2 1772 aa29.66■■■□□ 2.34
MBD3-202ENST00000434436 PLEKHM2Q8IWE5 1019 aa29.65■■■□□ 2.34
MBD3-202ENST00000434436 KDM3BQ7LBC6 1761 aa29.65■■■□□ 2.34
MBD3-202ENST00000434436 FKBP5Q13451 457 aaPredicted RBP29.64■■■□□ 2.34
MBD3-202ENST00000434436 ANKRD24Q8TF21 1146 aa29.64■■■□□ 2.34
MBD3-202ENST00000434436 DNAJC5Q9H3Z4 198 aa29.64■■■□□ 2.34
MBD3-202ENST00000434436 ALS2Q96Q42 1657 aa29.64■■■□□ 2.34
MBD3-202ENST00000434436 AXIN2Q9Y2T1 843 aa29.63■■■□□ 2.33
MBD3-202ENST00000434436 MST1RQ04912 1400 aa29.63■■■□□ 2.33
MBD3-202ENST00000434436 CAMTA1Q9Y6Y1 1673 aa29.63■■■□□ 2.33
MBD3-202ENST00000434436 PLEKHO1Q53GL0 409 aaPredicted RBP29.63■■■□□ 2.33
MBD3-202ENST00000434436 AKAP4Q5JQC9 854 aa29.63■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms