RNA–Protein interactions for RNA: ENST00000434424.5

PTPRK-212, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 555 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-212ENST00000434424 ZIC2O95409 532 aaPredicted RBP11.77□□□□□ -0.53
PTPRK-212ENST00000434424 SCARF1Q14162 830 aa11.77□□□□□ -0.53
PTPRK-212ENST00000434424 CCDC180Q9P1Z9 1646 aa11.76□□□□□ -0.53
PTPRK-212ENST00000434424 ZSCAN1Q8NBB4 408 aa11.76□□□□□ -0.53
PTPRK-212ENST00000434424 GNEQ9Y223 722 aaKnown RBP11.76□□□□□ -0.53
PTPRK-212ENST00000434424 NR1H3Q13133 447 aa11.75□□□□□ -0.53
PTPRK-212ENST00000434424 ELOAQ14241 798 aaKnown RBP11.75□□□□□ -0.53
PTPRK-212ENST00000434424 NR5A1Q13285 461 aa11.74□□□□□ -0.53
PTPRK-212ENST00000434424 AGERQ15109 404 aa11.73□□□□□ -0.53
PTPRK-212ENST00000434424 KANK4Q5T7N3 995 aaPredicted RBP11.73□□□□□ -0.53
PTPRK-212ENST00000434424 SH3RF1Q7Z6J0 888 aa11.73□□□□□ -0.53
PTPRK-212ENST00000434424 BPHLQ86WA6 291 aaPredicted RBP11.73□□□□□ -0.53
PTPRK-212ENST00000434424 C1QTNF2Q9BXJ5 285 aa11.73□□□□□ -0.53
PTPRK-212ENST00000434424 CCER1Q8TC90 406 aaPredicted RBP11.72□□□□□ -0.53
PTPRK-212ENST00000434424 C6orf118Q5T5N4 469 aa11.71□□□□□ -0.53
PTPRK-212ENST00000434424 NFATC2IPQ8NCF5 419 aa11.71□□□□□ -0.53
PTPRK-212ENST00000434424 VSIG8P0DPA2 414 aa11.7□□□□□ -0.54
PTPRK-212ENST00000434424 ZBBXA8MT70 800 aa11.69□□□□□ -0.54
PTPRK-212ENST00000434424 FBXO45P0C2W1 286 aa11.69□□□□□ -0.54
PTPRK-212ENST00000434424 TMEM164Q5U3C3 297 aa11.69□□□□□ -0.54
PTPRK-212ENST00000434424 SH3BP5LQ7L8J4 393 aa11.69□□□□□ -0.54
PTPRK-212ENST00000434424 MEIOBQ8N635 442 aa11.69□□□□□ -0.54
PTPRK-212ENST00000434424 ZMIZ1Q9ULJ6 1067 aa11.68□□□□□ -0.54
PTPRK-212ENST00000434424 NOVA2Q9UNW9 492 aaKnown RBP11.68□□□□□ -0.54
PTPRK-212ENST00000434424 FAM181BA6NEQ2 426 aa11.67□□□□□ -0.54
PTPRK-212ENST00000434424 PIK3CDO00329 1044 aa11.67□□□□□ -0.54
PTPRK-212ENST00000434424 SKIP12755 728 aa11.67□□□□□ -0.54
PTPRK-212ENST00000434424 STK32AQ8WU08 396 aa11.67□□□□□ -0.54
PTPRK-212ENST00000434424 USP17L3A6NCW0 530 aa11.66□□□□□ -0.54
PTPRK-212ENST00000434424 USP17L4A6NCW7 530 aa11.66□□□□□ -0.54
PTPRK-212ENST00000434424 MAN1A2O60476 641 aa11.66□□□□□ -0.54
PTPRK-212ENST00000434424 FSHRP23945 695 aa11.66□□□□□ -0.54
PTPRK-212ENST00000434424 USP17L2Q6R6M4 530 aa11.66□□□□□ -0.54
PTPRK-212ENST00000434424 USP17L1Q7RTZ2 530 aa11.66□□□□□ -0.54
PTPRK-212ENST00000434424 TRMT44Q8IYL2 757 aaKnown RBP11.66□□□□□ -0.54
PTPRK-212ENST00000434424 LINC00528Q8N1L1 170 aa11.66□□□□□ -0.54
PTPRK-212ENST00000434424 ARMC2Q8NEN0 867 aa11.66□□□□□ -0.54
PTPRK-212ENST00000434424 FKBPLQ9UIM3 349 aa11.66□□□□□ -0.54
PTPRK-212ENST00000434424 MAP4K5Q9Y4K4 846 aa11.66□□□□□ -0.54
PTPRK-212ENST00000434424 TXNDC2Q86VQ3 553 aa11.65□□□□□ -0.54
PTPRK-212ENST00000434424 PLEKHM2Q8IWE5 1019 aa11.65□□□□□ -0.54
PTPRK-212ENST00000434424 SOS2Q07890 1332 aaPredicted RBP11.64□□□□□ -0.55
PTPRK-212ENST00000434424 USP17L5A8MUK1 530 aa11.64□□□□□ -0.55
PTPRK-212ENST00000434424 BMP2P12643 396 aa11.64□□□□□ -0.55
PTPRK-212ENST00000434424 NBPF14Q5TI25 921 aa11.64□□□□□ -0.55
PTPRK-212ENST00000434424 DNMT3LQ9UJW3 386 aa11.64□□□□□ -0.55
PTPRK-212ENST00000434424 MAGEB6P1A0A0J9YX57 407 aa11.63□□□□□ -0.55
PTPRK-212ENST00000434424 IGSF3O75054 1194 aa11.63□□□□□ -0.55
PTPRK-212ENST00000434424 PPFIA3O75145 1194 aa11.63□□□□□ -0.55
PTPRK-212ENST00000434424 VASH1Q7L8A9 365 aaPredicted RBP11.63□□□□□ -0.55
PTPRK-212ENST00000434424 ZC3H4Q9UPT8 1303 aaKnown RBP11.62□□□□□ -0.55
PTPRK-212ENST00000434424 FAM196BA6NMK8 535 aa11.62□□□□□ -0.55
PTPRK-212ENST00000434424 ARID4AP29374 1257 aaPredicted RBP11.62□□□□□ -0.55
PTPRK-212ENST00000434424 LARP1Q6PKG0 1096 aaKnown RBP11.61□□□□□ -0.55
PTPRK-212ENST00000434424 USP17L15C9J2P7 530 aa11.6□□□□□ -0.55
PTPRK-212ENST00000434424 USP17L10C9JJH3 530 aa11.6□□□□□ -0.55
PTPRK-212ENST00000434424 USP17L13C9JLJ4 530 aa11.6□□□□□ -0.55
PTPRK-212ENST00000434424 USP17L12C9JPN9 530 aa11.6□□□□□ -0.55
PTPRK-212ENST00000434424 USP17L11C9JVI0 530 aa11.6□□□□□ -0.55
PTPRK-212ENST00000434424 USP17L21D6R901 530 aa11.6□□□□□ -0.55
PTPRK-212ENST00000434424 USP17L18D6R9N7 530 aa11.6□□□□□ -0.55
PTPRK-212ENST00000434424 USP17L22D6RA61 530 aa11.6□□□□□ -0.55
PTPRK-212ENST00000434424 USP17L17D6RBQ6 530 aa11.6□□□□□ -0.55
PTPRK-212ENST00000434424 USP17L19D6RCP7 530 aa11.6□□□□□ -0.55
PTPRK-212ENST00000434424 USP17L20D6RJB6 530 aa11.6□□□□□ -0.55
PTPRK-212ENST00000434424 UPP2O95045 317 aa11.6□□□□□ -0.55
PTPRK-212ENST00000434424 USP17L24Q0WX57 530 aa11.6□□□□□ -0.55
PTPRK-212ENST00000434424 ERFEQ4G0M1 354 aa11.6□□□□□ -0.55
PTPRK-212ENST00000434424 PHLDB3Q6NSJ2 640 aa11.6□□□□□ -0.55
PTPRK-212ENST00000434424 CARD14Q9BXL6 1004 aa11.6□□□□□ -0.55
PTPRK-212ENST00000434424 MKRN1Q9UHC7 482 aaKnown RBP11.6□□□□□ -0.55
PTPRK-212ENST00000434424 SSFA2P28290 1259 aa11.59□□□□□ -0.55
PTPRK-212ENST00000434424 CCDC116Q8IYX3 515 aa11.59□□□□□ -0.55
PTPRK-212ENST00000434424 DEPDC4Q8N2C3 294 aa11.59□□□□□ -0.55
PTPRK-212ENST00000434424 ZNF592Q92610 1267 aa11.59□□□□□ -0.55
PTPRK-212ENST00000434424 LOC105371045A0A1W2PR82 267 aa11.58□□□□□ -0.56
PTPRK-212ENST00000434424 ERCC3P19447 782 aa11.58□□□□□ -0.56
PTPRK-212ENST00000434424 FAM200AQ8TCP9 573 aa11.58□□□□□ -0.56
PTPRK-212ENST00000434424 EMILIN1Q9Y6C2 1016 aa11.58□□□□□ -0.56
PTPRK-212ENST00000434424 RBM47A0AV96 593 aaKnown RBP11.57□□□□□ -0.56
PTPRK-212ENST00000434424 ATP5J2-PTCD1G3V325 749 aa11.57□□□□□ -0.56
PTPRK-212ENST00000434424 SLFNL1Q499Z3 407 aa11.57□□□□□ -0.56
PTPRK-212ENST00000434424 TSEN34Q9BSV6 310 aaKnown RBP11.57□□□□□ -0.56
PTPRK-212ENST00000434424 RASA1P20936 1047 aa11.56□□□□□ -0.56
PTPRK-212ENST00000434424 MCCD1P59942 119 aaPredicted RBP11.56□□□□□ -0.56
PTPRK-212ENST00000434424 CRTC2Q53ET0 693 aaPredicted RBP11.56□□□□□ -0.56
PTPRK-212ENST00000434424 GPKOWQ92917 476 aaPredicted RBP eCLIP11.56□□□□□ -0.56
PTPRK-212ENST00000434424 CDCA7Q9BWT1 371 aaPredicted RBP11.56□□□□□ -0.56
PTPRK-212ENST00000434424 SHROOM4Q9ULL8 1493 aa11.56□□□□□ -0.56
PTPRK-212ENST00000434424 LZTS3O60299 673 aaPredicted RBP11.55□□□□□ -0.56
PTPRK-212ENST00000434424 CBLBQ13191 982 aa11.55□□□□□ -0.56
PTPRK-212ENST00000434424 PTK7Q13308 1070 aa11.55□□□□□ -0.56
PTPRK-212ENST00000434424 PPP1R26Q5T8A7 1209 aaPredicted RBP11.55□□□□□ -0.56
PTPRK-212ENST00000434424 CLP1Q92989 425 aaKnown RBP11.55□□□□□ -0.56
PTPRK-212ENST00000434424 CEP126Q9P2H0 1117 aa11.55□□□□□ -0.56
PTPRK-212ENST00000434424 UNCXA6NJT0 531 aa11.54□□□□□ -0.56
PTPRK-212ENST00000434424 NCOA4Q13772 614 aa11.54□□□□□ -0.56
PTPRK-212ENST00000434424 Q6ZVU0 165 aa11.54□□□□□ -0.56
PTPRK-212ENST00000434424 RNF135Q8IUD6 432 aa11.54□□□□□ -0.56
PTPRK-212ENST00000434424 GPR161Q8N6U8 529 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms