RNA–Protein interactions for RNA: ENST00000434418.2

LINC01090-202, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 5 BASIC

Gene LINC01090, Length 560 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-202ENST00000434418 MSS51Q4VC12 460 aa15.61■□□□□ 0.09
LINC01090-202ENST00000434418 SLC6A16Q9GZN6 736 aa15.61■□□□□ 0.09
LINC01090-202ENST00000434418 KIF3BO15066 747 aa15.6■□□□□ 0.09
LINC01090-202ENST00000434418 CEP170BQ9Y4F5 1589 aaPredicted RBP15.6■□□□□ 0.09
LINC01090-202ENST00000434418 PTPRTO14522 1441 aa15.6■□□□□ 0.09
LINC01090-202ENST00000434418 MAP3K1Q13233 1512 aa15.59■□□□□ 0.09
LINC01090-202ENST00000434418 PPP2R2DQ66LE6 453 aa15.59■□□□□ 0.09
LINC01090-202ENST00000434418 SPDYE5A6NIY4 337 aa15.58■□□□□ 0.08
LINC01090-202ENST00000434418 IFFO2Q5TF58 517 aa15.58■□□□□ 0.08
LINC01090-202ENST00000434418 TSC1Q92574 1164 aa15.58■□□□□ 0.08
LINC01090-202ENST00000434418 KDM5DQ9BY66 1539 aa15.58■□□□□ 0.08
LINC01090-202ENST00000434418 RFC5P40937 340 aa15.57■□□□□ 0.08
LINC01090-202ENST00000434418 PPP1R18Q6NYC8 613 aa15.57■□□□□ 0.08
LINC01090-202ENST00000434418 MYOM3Q5VTT5 1437 aa15.57■□□□□ 0.08
LINC01090-202ENST00000434418 PPEF1O14829 653 aaPredicted RBP15.56■□□□□ 0.08
LINC01090-202ENST00000434418 TSPY4P0CV99 314 aa15.55■□□□□ 0.08
LINC01090-202ENST00000434418 TSPY10P0CW01 314 aa15.55■□□□□ 0.08
LINC01090-202ENST00000434418 MAST1Q9Y2H9 1570 aa15.54■□□□□ 0.08
LINC01090-202ENST00000434418 DXOO77932 396 aaKnown RBP15.54■□□□□ 0.08
LINC01090-202ENST00000434418 JUNDP17535 347 aa15.54■□□□□ 0.08
LINC01090-202ENST00000434418 LTBP4Q8N2S1 1624 aa15.54■□□□□ 0.08
LINC01090-202ENST00000434418 MMP16P51512 607 aa15.53■□□□□ 0.08
LINC01090-202ENST00000434418 PZPP20742 1482 aa15.52■□□□□ 0.08
LINC01090-202ENST00000434418 MIA2Q96PC5 1412 aa15.52■□□□□ 0.08
LINC01090-202ENST00000434418 WASHC2CQ9Y4E1 1318 aa15.52■□□□□ 0.08
LINC01090-202ENST00000434418 A0A0G2JS52 829 aa15.52■□□□□ 0.08
LINC01090-202ENST00000434418 RNF223E7ERA6 249 aa15.52■□□□□ 0.08
LINC01090-202ENST00000434418 DNMT1P26358 1616 aaKnown RBP15.52■□□□□ 0.08
LINC01090-202ENST00000434418 RNF17Q9BXT8 1623 aaKnown RBP15.52■□□□□ 0.08
LINC01090-202ENST00000434418 FAM135AQ9P2D6 1515 aa15.52■□□□□ 0.07
LINC01090-202ENST00000434418 A2ML1A8K2U0 1454 aa15.52■□□□□ 0.07
LINC01090-202ENST00000434418 PLA2R1Q13018 1463 aa15.52■□□□□ 0.07
LINC01090-202ENST00000434418 TNRQ92752 1358 aa15.51■□□□□ 0.07
LINC01090-202ENST00000434418 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.51■□□□□ 0.07
LINC01090-202ENST00000434418 TCOF1Q13428 1488 aaKnown RBP15.51■□□□□ 0.07
LINC01090-202ENST00000434418 CROCC2H7BZ55 1655 aa15.51■□□□□ 0.07
LINC01090-202ENST00000434418 PER1O15534 1290 aaPredicted RBP15.5■□□□□ 0.07
LINC01090-202ENST00000434418 AP1G2O75843 785 aa15.5■□□□□ 0.07
LINC01090-202ENST00000434418 PTPN23Q9H3S7 1636 aa15.5■□□□□ 0.07
LINC01090-202ENST00000434418 CTDSPL2Q05D32 466 aa15.49■□□□□ 0.07
LINC01090-202ENST00000434418 FCF1Q9Y324 198 aaKnown RBP15.49■□□□□ 0.07
LINC01090-202ENST00000434418 MROH1Q8NDA8 1641 aa15.49■□□□□ 0.07
LINC01090-202ENST00000434418 EIF2AK4Q9P2K8 1649 aaKnown RBP15.49■□□□□ 0.07
LINC01090-202ENST00000434418 ABCC3O15438 1527 aa15.48■□□□□ 0.07
LINC01090-202ENST00000434418 ZNF335Q9H4Z2 1342 aaPredicted RBP15.48■□□□□ 0.07
LINC01090-202ENST00000434418 HELBQ8NG08 1087 aaPredicted RBP15.48■□□□□ 0.07
LINC01090-202ENST00000434418 POLR1AO95602 1720 aaPredicted RBP15.48■□□□□ 0.07
LINC01090-202ENST00000434418 ZC3H13Q5T200 1668 aaKnown RBP15.48■□□□□ 0.07
LINC01090-202ENST00000434418 CEP152O94986 1710 aa15.47■□□□□ 0.07
LINC01090-202ENST00000434418 DESI1Q6ICB0 168 aa15.47■□□□□ 0.07
LINC01090-202ENST00000434418 GGCXP38435 758 aa15.46■□□□□ 0.07
LINC01090-202ENST00000434418 ABCC5O15440 1437 aa15.45■□□□□ 0.06
LINC01090-202ENST00000434418 DUOX2Q9NRD8 1548 aa15.45■□□□□ 0.06
LINC01090-202ENST00000434418 PLA2G2CQ5R387 149 aa15.45■□□□□ 0.06
LINC01090-202ENST00000434418 LYPD8Q6UX82 237 aa15.45■□□□□ 0.06
LINC01090-202ENST00000434418 NEURL4Q96JN8 1562 aa15.45■□□□□ 0.06
LINC01090-202ENST00000434418 FGD6Q6ZV73 1430 aa15.44■□□□□ 0.06
LINC01090-202ENST00000434418 USP17L8P0C7I0 530 aa15.44■□□□□ 0.06
LINC01090-202ENST00000434418 LRRN4Q8WUT4 740 aa15.44■□□□□ 0.06
LINC01090-202ENST00000434418 NUDT12Q9BQG2 462 aa15.44■□□□□ 0.06
LINC01090-202ENST00000434418 KIF15Q9NS87 1388 aa15.44■□□□□ 0.06
LINC01090-202ENST00000434418 SHANK2Q9UPX8 1470 aa15.44■□□□□ 0.06
LINC01090-202ENST00000434418 DAPK1P53355 1430 aa15.43■□□□□ 0.06
LINC01090-202ENST00000434418 UGGT1Q9NYU2 1555 aa15.42■□□□□ 0.06
LINC01090-202ENST00000434418 NLRP1Q9C000 1473 aa15.42■□□□□ 0.06
LINC01090-202ENST00000434418 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.42■□□□□ 0.06
LINC01090-202ENST00000434418 PTPRNQ16849 979 aa15.42■□□□□ 0.06
LINC01090-202ENST00000434418 CCDC24Q8N4L8 307 aa15.42■□□□□ 0.06
LINC01090-202ENST00000434418 RRP7BPQ9NSQ0 103 aa15.42■□□□□ 0.06
LINC01090-202ENST00000434418 SPATA31D1Q6ZQQ2 1576 aa15.41■□□□□ 0.06
LINC01090-202ENST00000434418 ERVK-7P63135 1459 aa15.41■□□□□ 0.06
LINC01090-202ENST00000434418 IQSEC2Q5JU85 1478 aa15.41■□□□□ 0.06
LINC01090-202ENST00000434418 ANKLE1Q8NAG6 615 aa15.41■□□□□ 0.06
LINC01090-202ENST00000434418 CFAP65Q6ZU64 1925 aaKnown RBP15.41■□□□□ 0.06
LINC01090-202ENST00000434418 PRDM15P57071 1507 aaPredicted RBP15.4■□□□□ 0.06
LINC01090-202ENST00000434418 CCNYL3P0C7X3 344 aa15.4■□□□□ 0.06
LINC01090-202ENST00000434418 TMEM259Q4ZIN3 620 aa15.4■□□□□ 0.06
LINC01090-202ENST00000434418 HMX1Q9NP08 348 aaPredicted RBP15.4■□□□□ 0.06
LINC01090-202ENST00000434418 MAP10Q9P2G4 905 aa15.39■□□□□ 0.05
LINC01090-202ENST00000434418 ERBINQ96RT1 1412 aa15.39■□□□□ 0.05
LINC01090-202ENST00000434418 SNRKQ9NRH2 765 aa15.38■□□□□ 0.05
LINC01090-202ENST00000434418 CHIC2Q9UKJ5 165 aa15.38■□□□□ 0.05
LINC01090-202ENST00000434418 DEPDC5O75140 1603 aa15.37■□□□□ 0.05
LINC01090-202ENST00000434418 EMID1Q96A84 441 aaPredicted RBP15.37■□□□□ 0.05
LINC01090-202ENST00000434418 F12P00748 615 aaPredicted RBP15.36■□□□□ 0.05
LINC01090-202ENST00000434418 PTCRAQ6ISU1 281 aaPredicted RBP15.36■□□□□ 0.05
LINC01090-202ENST00000434418 ANKLE2Q86XL3 938 aa15.36■□□□□ 0.05
LINC01090-202ENST00000434418 THEMISQ8N1K5 641 aaPredicted RBP15.36■□□□□ 0.05
LINC01090-202ENST00000434418 UBAP1LF5GYI3 381 aa15.35■□□□□ 0.05
LINC01090-202ENST00000434418 ANKRD30AQ9BXX3 1397 aa15.35■□□□□ 0.05
LINC01090-202ENST00000434418 IQGAP1P46940 1657 aa15.35■□□□□ 0.05
LINC01090-202ENST00000434418 NPHP4O75161 1426 aaPredicted RBP15.34■□□□□ 0.05
LINC01090-202ENST00000434418 UBR1Q8IWV7 1749 aa15.34■□□□□ 0.05
LINC01090-202ENST00000434418 VWDEQ8N2E2 1590 aa15.34■□□□□ 0.05
LINC01090-202ENST00000434418 CTHP32929 405 aa15.34■□□□□ 0.05
LINC01090-202ENST00000434418 EVA1BQ9NVM1 165 aa15.34■□□□□ 0.05
LINC01090-202ENST00000434418 FAM50AQ14320 339 aaKnown RBP15.33■□□□□ 0.04
LINC01090-202ENST00000434418 EPS8L1Q8TE68 723 aa15.33■□□□□ 0.04
LINC01090-202ENST00000434418 KCNH2Q12809 1159 aa15.32■□□□□ 0.04
LINC01090-202ENST00000434418 MTMR14Q8NCE2 650 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms