RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 SETD1BQ9UPS6 1966 aaKnown RBP18.53■□□□□ 0.56
RFTN1-203ENST00000432519 NWD1Q149M9 1564 aa18.53■□□□□ 0.56
RFTN1-203ENST00000432519 XPCQ01831 940 aaPredicted RBP18.53■□□□□ 0.56
RFTN1-203ENST00000432519 ESCO1Q5FWF5 840 aa18.53■□□□□ 0.56
RFTN1-203ENST00000432519 NUCB1Q02818 461 aa18.52■□□□□ 0.56
RFTN1-203ENST00000432519 ZNF142P52746 1687 aaPredicted RBP18.52■□□□□ 0.55
RFTN1-203ENST00000432519 ORAI2Q96SN7 254 aa18.51■□□□□ 0.55
RFTN1-203ENST00000432519 G2E3Q7L622 706 aa18.5■□□□□ 0.55
RFTN1-203ENST00000432519 RTF1Q92541 710 aaKnown RBP18.5■□□□□ 0.55
RFTN1-203ENST00000432519 TSPYL4Q9UJ04 414 aa18.5■□□□□ 0.55
RFTN1-203ENST00000432519 CHD1LQ86WJ1 897 aa18.49■□□□□ 0.55
RFTN1-203ENST00000432519 API5Q9BZZ5 524 aaKnown RBP18.49■□□□□ 0.55
RFTN1-203ENST00000432519 ZBTB7CA1YPR0 619 aa18.48■□□□□ 0.55
RFTN1-203ENST00000432519 KIAA0232Q92628 1395 aa18.48■□□□□ 0.55
RFTN1-203ENST00000432519 SLC4A2P04920 1241 aa18.48■□□□□ 0.55
RFTN1-203ENST00000432519 ANKRD45Q5TZF3 282 aa18.48■□□□□ 0.55
RFTN1-203ENST00000432519 IL17REQ8NFR9 667 aa18.47■□□□□ 0.55
RFTN1-203ENST00000432519 TBC1D32Q96NH3 1257 aa18.47■□□□□ 0.55
RFTN1-203ENST00000432519 ADGRL3Q9HAR2 1447 aa18.47■□□□□ 0.55
RFTN1-203ENST00000432519 PSME1Q06323 249 aa18.47■□□□□ 0.55
RFTN1-203ENST00000432519 BCL11AQ9H165 835 aa18.47■□□□□ 0.55
RFTN1-203ENST00000432519 NPHP4O75161 1426 aaPredicted RBP18.46■□□□□ 0.55
RFTN1-203ENST00000432519 LTN1O94822 1766 aa18.46■□□□□ 0.55
RFTN1-203ENST00000432519 GAS2L2Q8NHY3 880 aa18.46■□□□□ 0.55
RFTN1-203ENST00000432519 DAXXQ9UER7 740 aaPredicted RBP18.46■□□□□ 0.55
RFTN1-203ENST00000432519 F6X3S4 739 aa18.46■□□□□ 0.54
RFTN1-203ENST00000432519 INTS3Q68E01 1043 aaKnown RBP18.46■□□□□ 0.54
RFTN1-203ENST00000432519 NECTIN2Q92692 538 aa18.46■□□□□ 0.54
RFTN1-203ENST00000432519 NBPF6Q5VWK0 638 aa18.45■□□□□ 0.54
RFTN1-203ENST00000432519 NBPF4Q96M43 638 aa18.45■□□□□ 0.54
RFTN1-203ENST00000432519 USP54Q70EL1 1684 aa18.45■□□□□ 0.54
RFTN1-203ENST00000432519 MFAP1P55081 439 aaKnown RBP18.45■□□□□ 0.54
RFTN1-203ENST00000432519 MSH6P52701 1360 aa18.44■□□□□ 0.54
RFTN1-203ENST00000432519 MEIS3Q99687 375 aa18.44■□□□□ 0.54
RFTN1-203ENST00000432519 GNAT3A8MTJ3 354 aa18.44■□□□□ 0.54
RFTN1-203ENST00000432519 DEKP35659 375 aaKnown RBP18.44■□□□□ 0.54
RFTN1-203ENST00000432519 LRRC59Q96AG4 307 aaKnown RBP18.44■□□□□ 0.54
RFTN1-203ENST00000432519 NFAT5O94916 1531 aa18.43■□□□□ 0.54
RFTN1-203ENST00000432519 RTL5Q5HYW3 569 aaPredicted RBP18.42■□□□□ 0.54
RFTN1-203ENST00000432519 IP6K1Q92551 441 aa18.42■□□□□ 0.54
RFTN1-203ENST00000432519 ATP10DQ9P241 1426 aa18.42■□□□□ 0.54
RFTN1-203ENST00000432519 KIF24Q5T7B8 1368 aa18.42■□□□□ 0.54
RFTN1-203ENST00000432519 GCC1Q96CN9 775 aa18.41■□□□□ 0.54
RFTN1-203ENST00000432519 RGPD2P0DJD1 1756 aa18.41■□□□□ 0.54
RFTN1-203ENST00000432519 LMOD2Q6P5Q4 547 aa18.41■□□□□ 0.54
RFTN1-203ENST00000432519 SLC4A10Q6U841 1118 aa18.4■□□□□ 0.54
RFTN1-203ENST00000432519 LRRC37A3O60309 1634 aa18.4■□□□□ 0.54
RFTN1-203ENST00000432519 MAP3K5Q99683 1374 aa18.4■□□□□ 0.54
RFTN1-203ENST00000432519 NFKBIBQ15653 356 aa18.4■□□□□ 0.54
RFTN1-203ENST00000432519 C16orf71Q8IYS4 520 aaPredicted RBP18.39■□□□□ 0.54
RFTN1-203ENST00000432519 UPF2Q9HAU5 1272 aaKnown RBP18.39■□□□□ 0.54
RFTN1-203ENST00000432519 RTL1A6NKG5 1358 aa18.39■□□□□ 0.53
RFTN1-203ENST00000432519 CHMP4BQ9H444 224 aaKnown RBP18.39■□□□□ 0.53
RFTN1-203ENST00000432519 LGR6Q9HBX8 967 aa18.39■□□□□ 0.53
RFTN1-203ENST00000432519 PTPRCP08575 1304 aa18.39■□□□□ 0.53
RFTN1-203ENST00000432519 CEP85Q6P2H3 762 aa18.38■□□□□ 0.53
RFTN1-203ENST00000432519 TBC1D2Q9BYX2 928 aa18.38■□□□□ 0.53
RFTN1-203ENST00000432519 C22orf23Q9BZE7 217 aa18.38■□□□□ 0.53
RFTN1-203ENST00000432519 GCP02774 474 aa18.37■□□□□ 0.53
RFTN1-203ENST00000432519 OTUD7AQ8TE49 926 aaPredicted RBP18.37■□□□□ 0.53
RFTN1-203ENST00000432519 HTATSF1O43719 755 aaKnown RBP18.37■□□□□ 0.53
RFTN1-203ENST00000432519 HAP1P54257 671 aaPredicted RBP18.37■□□□□ 0.53
RFTN1-203ENST00000432519 PROSER2Q86WR7 435 aaPredicted RBP18.37■□□□□ 0.53
RFTN1-203ENST00000432519 SLKQ9H2G2 1235 aaPredicted RBP18.37■□□□□ 0.53
RFTN1-203ENST00000432519 DCTPP1Q9H773 170 aa18.37■□□□□ 0.53
RFTN1-203ENST00000432519 APBB1O00213 710 aa18.36■□□□□ 0.53
RFTN1-203ENST00000432519 ANKRD44Q8N8A2 993 aa18.36■□□□□ 0.53
RFTN1-203ENST00000432519 DDX17Q92841 729 aaKnown RBP18.36■□□□□ 0.53
RFTN1-203ENST00000432519 AXIN2Q9Y2T1 843 aa18.36■□□□□ 0.53
RFTN1-203ENST00000432519 SMARCA5O60264 1052 aaPredicted RBP18.35■□□□□ 0.53
RFTN1-203ENST00000432519 TAF7Q15545 349 aaPredicted RBP18.35■□□□□ 0.53
RFTN1-203ENST00000432519 BMP2KLQ5H9B9 411 aa18.35■□□□□ 0.53
RFTN1-203ENST00000432519 KCNQ3O43525 872 aa18.35■□□□□ 0.53
RFTN1-203ENST00000432519 GSPT1P15170 499 aaKnown RBP18.34■□□□□ 0.53
RFTN1-203ENST00000432519 FLIIQ13045 1269 aa18.34■□□□□ 0.53
RFTN1-203ENST00000432519 ARHGEF25Q86VW2 580 aa18.34■□□□□ 0.53
RFTN1-203ENST00000432519 SPRYD3Q8NCJ5 442 aa18.34■□□□□ 0.53
RFTN1-203ENST00000432519 FRAT2O75474 233 aaPredicted RBP18.34■□□□□ 0.53
RFTN1-203ENST00000432519 PLEKHM2Q8IWE5 1019 aa18.34■□□□□ 0.53
RFTN1-203ENST00000432519 KCNH5Q8NCM2 988 aa18.33■□□□□ 0.53
RFTN1-203ENST00000432519 FKBP5Q13451 457 aaPredicted RBP18.32■□□□□ 0.52
RFTN1-203ENST00000432519 CEMIPQ8WUJ3 1361 aa18.32■□□□□ 0.52
RFTN1-203ENST00000432519 MPRIPQ6WCQ1 1025 aa18.32■□□□□ 0.52
RFTN1-203ENST00000432519 KRT28Q7Z3Y7 464 aa18.32■□□□□ 0.52
RFTN1-203ENST00000432519 STK31Q9BXU1 1019 aa18.32■□□□□ 0.52
RFTN1-203ENST00000432519 PHAXQ9H814 394 aaKnown RBP18.32■□□□□ 0.52
RFTN1-203ENST00000432519 FAM208AQ9UK61 1670 aaKnown RBP18.31■□□□□ 0.52
RFTN1-203ENST00000432519 TBC1D9Q6ZT07 1266 aa18.31■□□□□ 0.52
RFTN1-203ENST00000432519 RPAP2Q8IXW5 612 aaPredicted RBP18.31■□□□□ 0.52
RFTN1-203ENST00000432519 BECN1Q14457 450 aa18.3■□□□□ 0.52
RFTN1-203ENST00000432519 CCDC30Q5VVM6 783 aa18.3■□□□□ 0.52
RFTN1-203ENST00000432519 USP35Q9P2H5 1018 aa18.3■□□□□ 0.52
RFTN1-203ENST00000432519 C1orf167Q5SNV9 1468 aa18.3■□□□□ 0.52
RFTN1-203ENST00000432519 PXDNQ92626 1479 aa18.3■□□□□ 0.52
RFTN1-203ENST00000432519 ANTXR1Q9H6X2 564 aa18.3■□□□□ 0.52
RFTN1-203ENST00000432519 ZC3H6P61129 1189 aaKnown RBP18.29■□□□□ 0.52
RFTN1-203ENST00000432519 ANKRD24Q8TF21 1146 aa18.29■□□□□ 0.52
RFTN1-203ENST00000432519 TRPM3Q9HCF6 1732 aaPredicted RBP18.28■□□□□ 0.52
RFTN1-203ENST00000432519 EIF2S2P20042 333 aaKnown RBP18.28■□□□□ 0.52
RFTN1-203ENST00000432519 ZNF530Q6P9A1 599 aaPredicted RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms