RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 SEC24BO95487 1268 aa17.68■□□□□ 0.42
HOXC4-202ENST00000430889 API5Q9BZZ5 524 aaKnown RBP17.68■□□□□ 0.42
HOXC4-202ENST00000430889 TRPM3Q9HCF6 1732 aaPredicted RBP17.68■□□□□ 0.42
HOXC4-202ENST00000430889 CHMP4BQ9H444 224 aaKnown RBP17.67■□□□□ 0.42
HOXC4-202ENST00000430889 FOXO3O43524 673 aa17.67■□□□□ 0.42
HOXC4-202ENST00000430889 FAM208AQ9UK61 1670 aaKnown RBP17.66■□□□□ 0.42
HOXC4-202ENST00000430889 HTATSF1O43719 755 aaKnown RBP17.66■□□□□ 0.42
HOXC4-202ENST00000430889 NUCB1Q02818 461 aa17.66■□□□□ 0.42
HOXC4-202ENST00000430889 KRT24Q2M2I5 525 aa17.66■□□□□ 0.42
HOXC4-202ENST00000430889 ABTB2Q8N961 1025 aa17.66■□□□□ 0.42
HOXC4-202ENST00000430889 GAS2L2Q8NHY3 880 aa17.66■□□□□ 0.42
HOXC4-202ENST00000430889 SLIT3O75094 1523 aa17.65■□□□□ 0.42
HOXC4-202ENST00000430889 HAP1P54257 671 aaPredicted RBP17.65■□□□□ 0.42
HOXC4-202ENST00000430889 CACNA1FO60840 1977 aa17.65■□□□□ 0.42
HOXC4-202ENST00000430889 MSH6P52701 1360 aa17.65■□□□□ 0.42
HOXC4-202ENST00000430889 INTS3Q68E01 1043 aaKnown RBP17.64■□□□□ 0.42
HOXC4-202ENST00000430889 RGPD2P0DJD1 1756 aa17.64■□□□□ 0.41
HOXC4-202ENST00000430889 N4BP2Q86UW6 1770 aaPredicted RBP17.64■□□□□ 0.41
HOXC4-202ENST00000430889 NUTM2GQ5VZR2 741 aa17.64■□□□□ 0.41
HOXC4-202ENST00000430889 SIRT2Q8IXJ6 389 aa17.64■□□□□ 0.41
HOXC4-202ENST00000430889 MED1Q15648 1581 aaPredicted RBP17.63■□□□□ 0.41
HOXC4-202ENST00000430889 KIF1AQ12756 1690 aa17.63■□□□□ 0.41
HOXC4-202ENST00000430889 CAMTA1Q9Y6Y1 1673 aa17.63■□□□□ 0.41
HOXC4-202ENST00000430889 NCAPD2Q15021 1401 aa17.62■□□□□ 0.41
HOXC4-202ENST00000430889 IP6K1Q92551 441 aa17.61■□□□□ 0.41
HOXC4-202ENST00000430889 RBM33Q96EV2 1170 aaKnown RBP17.61■□□□□ 0.41
HOXC4-202ENST00000430889 MST1RQ04912 1400 aa17.61■□□□□ 0.41
HOXC4-202ENST00000430889 PTPRCP08575 1304 aa17.61■□□□□ 0.41
HOXC4-202ENST00000430889 GCC1Q96CN9 775 aa17.61■□□□□ 0.41
HOXC4-202ENST00000430889 ATP10DQ9P241 1426 aa17.61■□□□□ 0.41
HOXC4-202ENST00000430889 LMO7Q8WWI1 1683 aa17.6■□□□□ 0.41
HOXC4-202ENST00000430889 TBC1D32Q96NH3 1257 aa17.6■□□□□ 0.41
HOXC4-202ENST00000430889 MAP3K5Q99683 1374 aa17.6■□□□□ 0.41
HOXC4-202ENST00000430889 CHD1LQ86WJ1 897 aa17.59■□□□□ 0.41
HOXC4-202ENST00000430889 RTF1Q92541 710 aaKnown RBP17.59■□□□□ 0.41
HOXC4-202ENST00000430889 C1orf115Q9H7X2 142 aa17.58■□□□□ 0.41
HOXC4-202ENST00000430889 ALS2Q96Q42 1657 aa17.58■□□□□ 0.4
HOXC4-202ENST00000430889 KDM3BQ7LBC6 1761 aa17.58■□□□□ 0.4
HOXC4-202ENST00000430889 GNAT3A8MTJ3 354 aa17.58■□□□□ 0.4
HOXC4-202ENST00000430889 BABAM1Q9NWV8 329 aa17.58■□□□□ 0.4
HOXC4-202ENST00000430889 TSPYL4Q9UJ04 414 aa17.58■□□□□ 0.4
HOXC4-202ENST00000430889 STRCP1A6NGW2 1772 aa17.57■□□□□ 0.4
HOXC4-202ENST00000430889 NBR1Q14596 966 aa17.57■□□□□ 0.4
HOXC4-202ENST00000430889 ESCO1Q5FWF5 840 aa17.57■□□□□ 0.4
HOXC4-202ENST00000430889 MIS18AQ9NYP9 233 aa17.57■□□□□ 0.4
HOXC4-202ENST00000430889 CEMIPQ8WUJ3 1361 aa17.56■□□□□ 0.4
HOXC4-202ENST00000430889 SLC4A3P48751 1232 aa17.56■□□□□ 0.4
HOXC4-202ENST00000430889 KCNH5Q8NCM2 988 aa17.56■□□□□ 0.4
HOXC4-202ENST00000430889 IL17REQ8NFR9 667 aa17.56■□□□□ 0.4
HOXC4-202ENST00000430889 SOS1Q07889 1333 aaPredicted RBP17.56■□□□□ 0.4
HOXC4-202ENST00000430889 C1orf167Q5SNV9 1468 aa17.55■□□□□ 0.4
HOXC4-202ENST00000430889 PSME1Q06323 249 aa17.55■□□□□ 0.4
HOXC4-202ENST00000430889 LNPKQ9C0E8 428 aa17.55■□□□□ 0.4
HOXC4-202ENST00000430889 ORAI2Q96SN7 254 aa17.54■□□□□ 0.4
HOXC4-202ENST00000430889 NBPF6Q5VWK0 638 aa17.53■□□□□ 0.4
HOXC4-202ENST00000430889 ANKRD44Q8N8A2 993 aa17.53■□□□□ 0.4
HOXC4-202ENST00000430889 NBPF4Q96M43 638 aa17.53■□□□□ 0.4
HOXC4-202ENST00000430889 SLC4A2P04920 1241 aa17.52■□□□□ 0.4
HOXC4-202ENST00000430889 BMP2KLQ5H9B9 411 aa17.52■□□□□ 0.4
HOXC4-202ENST00000430889 G2E3Q7L622 706 aa17.52■□□□□ 0.4
HOXC4-202ENST00000430889 ARHGEF25Q86VW2 580 aa17.52■□□□□ 0.4
HOXC4-202ENST00000430889 DCTPP1Q9H773 170 aa17.52■□□□□ 0.4
HOXC4-202ENST00000430889 LMTK3Q96Q04 1460 aa17.52■□□□□ 0.4
HOXC4-202ENST00000430889 ADAMTS7Q9UKP4 1686 aa17.52■□□□□ 0.39
HOXC4-202ENST00000430889 C14orf37Q86TY3 774 aa17.52■□□□□ 0.39
HOXC4-202ENST00000430889 LTV1Q96GA3 475 aaPredicted RBP17.52■□□□□ 0.39
HOXC4-202ENST00000430889 USP35Q9P2H5 1018 aa17.52■□□□□ 0.39
HOXC4-202ENST00000430889 RGPD5Q99666 1765 aa17.51■□□□□ 0.39
HOXC4-202ENST00000430889 USHBP1Q8N6Y0 703 aa17.51■□□□□ 0.39
HOXC4-202ENST00000430889 UPF2Q9HAU5 1272 aaKnown RBP17.51■□□□□ 0.39
HOXC4-202ENST00000430889 CRYBG1Q9Y4K1 1723 aa17.5■□□□□ 0.39
HOXC4-202ENST00000430889 SIPA1L3O60292 1781 aaPredicted RBP17.5■□□□□ 0.39
HOXC4-202ENST00000430889 TAF7Q15545 349 aaPredicted RBP17.5■□□□□ 0.39
HOXC4-202ENST00000430889 ANKRD45Q5TZF3 282 aa17.5■□□□□ 0.39
HOXC4-202ENST00000430889 CEP85Q6P2H3 762 aa17.5■□□□□ 0.39
HOXC4-202ENST00000430889 RPAP2Q8IXW5 612 aaPredicted RBP17.5■□□□□ 0.39
HOXC4-202ENST00000430889 DCCP43146 1447 aa17.5■□□□□ 0.39
HOXC4-202ENST00000430889 PXDNLA1KZ92 1463 aa17.5■□□□□ 0.39
HOXC4-202ENST00000430889 GCP02774 474 aa17.49■□□□□ 0.39
HOXC4-202ENST00000430889 NCOA3Q9Y6Q9 1424 aa17.49■□□□□ 0.39
HOXC4-202ENST00000430889 MEIS3Q99687 375 aa17.48■□□□□ 0.39
HOXC4-202ENST00000430889 OVOS2A0A0G2JMS6 1433 aa17.48■□□□□ 0.39
HOXC4-202ENST00000430889 PROSER2Q86WR7 435 aaPredicted RBP17.48■□□□□ 0.39
HOXC4-202ENST00000430889 C19orf44Q9H6X5 657 aa17.48■□□□□ 0.39
HOXC4-202ENST00000430889 DAXXQ9UER7 740 aaPredicted RBP17.48■□□□□ 0.39
HOXC4-202ENST00000430889 COL18A1P39060 1754 aa17.47■□□□□ 0.39
HOXC4-202ENST00000430889 CCT4P50991 539 aaKnown RBP17.47■□□□□ 0.39
HOXC4-202ENST00000430889 PXDNQ92626 1479 aa17.46■□□□□ 0.39
HOXC4-202ENST00000430889 CCDC30Q5VVM6 783 aa17.46■□□□□ 0.39
HOXC4-202ENST00000430889 C22orf23Q9BZE7 217 aa17.46■□□□□ 0.39
HOXC4-202ENST00000430889 TUBGCP6Q96RT7 1819 aa17.45■□□□□ 0.38
HOXC4-202ENST00000430889 RBM25P49756 843 aaKnown RBP17.45■□□□□ 0.38
HOXC4-202ENST00000430889 FLIIQ13045 1269 aa17.45■□□□□ 0.38
HOXC4-202ENST00000430889 BECN1Q14457 450 aa17.45■□□□□ 0.38
HOXC4-202ENST00000430889 RTL5Q5HYW3 569 aaPredicted RBP17.45■□□□□ 0.38
HOXC4-202ENST00000430889 KRT28Q7Z3Y7 464 aa17.45■□□□□ 0.38
HOXC4-202ENST00000430889 STK31Q9BXU1 1019 aa17.45■□□□□ 0.38
HOXC4-202ENST00000430889 ABCC6O95255 1503 aa17.44■□□□□ 0.38
HOXC4-202ENST00000430889 XIRP1Q702N8 1843 aaKnown RBP17.44■□□□□ 0.38
HOXC4-202ENST00000430889 F6X3S4 739 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms