RNA–Protein interactions for RNA: ENST00000430824.2

CAPN8-204, Transcript of calpain 8, humanhuman

TSL 5

Gene CAPN8, Length 695 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-204ENST00000430824 KAT6BQ8WYB5 2073 aa17.2■□□□□ 0.34
CAPN8-204ENST00000430824 BCL11BQ9C0K0 894 aaPredicted RBP17.19■□□□□ 0.34
CAPN8-204ENST00000430824 IGSF1Q8N6C5 1336 aa17.18■□□□□ 0.34
CAPN8-204ENST00000430824 DDX10Q13206 875 aaKnown RBP17.17■□□□□ 0.34
CAPN8-204ENST00000430824 ACSBG1Q96GR2 724 aa17.17■□□□□ 0.34
CAPN8-204ENST00000430824 SHANK3Q9BYB0 1731 aa17.17■□□□□ 0.34
CAPN8-204ENST00000430824 IL13P35225 146 aa17.16■□□□□ 0.34
CAPN8-204ENST00000430824 EZH2Q15910 746 aaKnown RBP17.16■□□□□ 0.34
CAPN8-204ENST00000430824 PTF1AQ7RTS3 328 aa17.16■□□□□ 0.34
CAPN8-204ENST00000430824 CAMKK2Q96RR4 588 aa17.16■□□□□ 0.34
CAPN8-204ENST00000430824 PCDH11XQ9BZA7 1347 aa17.16■□□□□ 0.34
CAPN8-204ENST00000430824 PCDH11YQ9BZA8 1340 aa17.16■□□□□ 0.34
CAPN8-204ENST00000430824 KCNQ2O43526 872 aa17.15■□□□□ 0.34
CAPN8-204ENST00000430824 SPG7Q9UQ90 795 aa17.15■□□□□ 0.34
CAPN8-204ENST00000430824 NHSQ6T4R5 1651 aa17.14■□□□□ 0.33
CAPN8-204ENST00000430824 DIAPH1O60610 1272 aaKnown RBP17.14■□□□□ 0.33
CAPN8-204ENST00000430824 PARD3Q8TEW0 1356 aa17.14■□□□□ 0.33
CAPN8-204ENST00000430824 PKD1L3Q7Z443 1732 aa17.13■□□□□ 0.33
CAPN8-204ENST00000430824 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.13■□□□□ 0.33
CAPN8-204ENST00000430824 PLSCR1O15162 318 aa17.12■□□□□ 0.33
CAPN8-204ENST00000430824 PPP2R1AP30153 589 aa17.12■□□□□ 0.33
CAPN8-204ENST00000430824 SULT6B1Q6IMI4 303 aa17.12■□□□□ 0.33
CAPN8-204ENST00000430824 AEBP1Q8IUX7 1158 aa17.12■□□□□ 0.33
CAPN8-204ENST00000430824 CYP27B1O15528 508 aa17.11■□□□□ 0.33
CAPN8-204ENST00000430824 SYTL4Q96C24 671 aaPredicted RBP17.11■□□□□ 0.33
CAPN8-204ENST00000430824 CFAP53Q96M91 514 aa17.11■□□□□ 0.33
CAPN8-204ENST00000430824 PRIM1P49642 420 aaKnown RBP17.1■□□□□ 0.33
CAPN8-204ENST00000430824 PLEKHG2Q9H7P9 1386 aa17.1■□□□□ 0.33
CAPN8-204ENST00000430824 DOT1LQ8TEK3 1739 aa17.1■□□□□ 0.33
CAPN8-204ENST00000430824 PLEKHO1Q53GL0 409 aaPredicted RBP17.09■□□□□ 0.33
CAPN8-204ENST00000430824 COL3A1P02461 1466 aaPredicted RBP17.09■□□□□ 0.33
CAPN8-204ENST00000430824 RGPD3A6NKT7 1758 aaPredicted RBP17.09■□□□□ 0.33
CAPN8-204ENST00000430824 RGPD4Q7Z3J3 1758 aa17.09■□□□□ 0.33
CAPN8-204ENST00000430824 BTAF1O14981 1849 aa17.09■□□□□ 0.33
CAPN8-204ENST00000430824 RREB1Q92766 1687 aa17.08■□□□□ 0.32
CAPN8-204ENST00000430824 KDRP35968 1356 aa17.08■□□□□ 0.32
CAPN8-204ENST00000430824 IFNL2Q8IZJ0 200 aa17.08■□□□□ 0.32
CAPN8-204ENST00000430824 U2SURPO15042 1029 aaKnown RBP17.07■□□□□ 0.32
CAPN8-204ENST00000430824 HMOX1P09601 288 aa17.07■□□□□ 0.32
CAPN8-204ENST00000430824 PHKG2P15735 406 aa17.07■□□□□ 0.32
CAPN8-204ENST00000430824 AMOTQ4VCS5 1084 aa17.07■□□□□ 0.32
CAPN8-204ENST00000430824 NKX1-1Q15270 411 aaPredicted RBP17.06■□□□□ 0.32
CAPN8-204ENST00000430824 NUP188Q5SRE5 1749 aa17.06■□□□□ 0.32
CAPN8-204ENST00000430824 TXNRD1Q16881 649 aa17.05■□□□□ 0.32
CAPN8-204ENST00000430824 ZNF530Q6P9A1 599 aaPredicted RBP17.05■□□□□ 0.32
CAPN8-204ENST00000430824 PROM2Q8N271 834 aa17.05■□□□□ 0.32
CAPN8-204ENST00000430824 ZNF316A6NFI3 1004 aaPredicted RBP17.04■□□□□ 0.32
CAPN8-204ENST00000430824 RALBP1Q15311 655 aa17.04■□□□□ 0.32
CAPN8-204ENST00000430824 NBPF14Q5TI25 921 aa17.04■□□□□ 0.32
CAPN8-204ENST00000430824 NUDCQ9Y266 331 aa17.04■□□□□ 0.32
CAPN8-204ENST00000430824 PSDA5PKW4 1024 aaPredicted RBP17.03■□□□□ 0.32
CAPN8-204ENST00000430824 C1orf141Q5JVX7 400 aa17.03■□□□□ 0.32
CAPN8-204ENST00000430824 MPRIPQ6WCQ1 1025 aa17.03■□□□□ 0.32
CAPN8-204ENST00000430824 ITGB4P16144 1822 aa17.03■□□□□ 0.32
CAPN8-204ENST00000430824 TOGARAM1Q9Y4F4 1720 aa17.02■□□□□ 0.32
CAPN8-204ENST00000430824 HSP90AB1P08238 724 aaKnown RBP17.02■□□□□ 0.32
CAPN8-204ENST00000430824 R3HDM1Q15032 1099 aaKnown RBP17.02■□□□□ 0.32
CAPN8-204ENST00000430824 DCAF5Q96JK2 942 aa17■□□□□ 0.31
CAPN8-204ENST00000430824 TMOD3Q9NYL9 352 aa17■□□□□ 0.31
CAPN8-204ENST00000430824 U2AF1L5P0DN76 240 aaPredicted RBP16.99■□□□□ 0.31
CAPN8-204ENST00000430824 U2AF1Q01081 240 aaKnown RBP eCLIP16.99■□□□□ 0.31
CAPN8-204ENST00000430824 PIGBQ92521 554 aa16.99■□□□□ 0.31
CAPN8-204ENST00000430824 ERVV-2B6SEH9 535 aa16.98■□□□□ 0.31
CAPN8-204ENST00000430824 AKAP4Q5JQC9 854 aa16.98■□□□□ 0.31
CAPN8-204ENST00000430824 SLC27A3Q5K4L6 730 aa16.98■□□□□ 0.31
CAPN8-204ENST00000430824 MYBBP1AQ9BQG0 1328 aaKnown RBP16.97■□□□□ 0.31
CAPN8-204ENST00000430824 LY75O60449 1722 aa16.97■□□□□ 0.31
CAPN8-204ENST00000430824 MTHFSDQ2M296 383 aaKnown RBP16.97■□□□□ 0.31
CAPN8-204ENST00000430824 SMARCC1Q92922 1105 aaPredicted RBP16.97■□□□□ 0.31
CAPN8-204ENST00000430824 ANO8Q9HCE9 1232 aaPredicted RBP16.97■□□□□ 0.31
CAPN8-204ENST00000430824 LRRC4BQ9NT99 713 aa16.97■□□□□ 0.31
CAPN8-204ENST00000430824 STK32BQ9NY57 414 aa16.97■□□□□ 0.31
CAPN8-204ENST00000430824 KDM6AO15550 1401 aaPredicted RBP16.96■□□□□ 0.31
CAPN8-204ENST00000430824 PRKAR2BP31323 418 aa16.96■□□□□ 0.31
CAPN8-204ENST00000430824 RSPH6AQ9H0K4 717 aa16.96■□□□□ 0.31
CAPN8-204ENST00000430824 PALLDQ8WX93 1383 aa16.95■□□□□ 0.3
CAPN8-204ENST00000430824 FCHSD2O94868 740 aa16.95■□□□□ 0.3
CAPN8-204ENST00000430824 KCNQ4P56696 695 aa16.95■□□□□ 0.3
CAPN8-204ENST00000430824 CABP4P57796 275 aa16.95■□□□□ 0.3
CAPN8-204ENST00000430824 CCNL1Q9UK58 526 aaPredicted RBP16.95■□□□□ 0.3
CAPN8-204ENST00000430824 SLC15A2Q16348 729 aa16.94■□□□□ 0.3
CAPN8-204ENST00000430824 GAS2L2Q8NHY3 880 aa16.94■□□□□ 0.3
CAPN8-204ENST00000430824 PRKRIP1Q9H875 184 aaPredicted RBP16.94■□□□□ 0.3
CAPN8-204ENST00000430824 SCN11AQ9UI33 1791 aa16.93■□□□□ 0.3
CAPN8-204ENST00000430824 ASAP1Q9ULH1 1129 aa16.93■□□□□ 0.3
CAPN8-204ENST00000430824 PAPPAQ13219 1627 aa16.92■□□□□ 0.3
CAPN8-204ENST00000430824 RNMTO43148 476 aaKnown RBP16.92■□□□□ 0.3
CAPN8-204ENST00000430824 PHACTR3Q96KR7 559 aa16.92■□□□□ 0.3
CAPN8-204ENST00000430824 LGR6Q9HBX8 967 aa16.92■□□□□ 0.3
CAPN8-204ENST00000430824 NFATC2IPQ8NCF5 419 aa16.91■□□□□ 0.3
CAPN8-204ENST00000430824 ATG3Q9NT62 314 aa16.91■□□□□ 0.3
CAPN8-204ENST00000430824 VIRMAQ69YN4 1812 aaKnown RBP16.91■□□□□ 0.3
CAPN8-204ENST00000430824 MAP3K5Q99683 1374 aa16.9■□□□□ 0.3
CAPN8-204ENST00000430824 GNAT3A8MTJ3 354 aa16.9■□□□□ 0.3
CAPN8-204ENST00000430824 HMGB2P26583 209 aaKnown RBP16.9■□□□□ 0.3
CAPN8-204ENST00000430824 ZNF827Q17R98 1081 aa16.9■□□□□ 0.3
CAPN8-204ENST00000430824 LOC102724428A0A0B4J2F2 783 aa16.89■□□□□ 0.29
CAPN8-204ENST00000430824 NEFMP07197 916 aa16.89■□□□□ 0.29
CAPN8-204ENST00000430824 SIK1P57059 783 aa16.89■□□□□ 0.29
CAPN8-204ENST00000430824 AKT1S1Q96B36 256 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms