RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 AEBP1Q8IUX7 1158 aa15.19■□□□□ 0.02
CPNE4-201ENST00000429747 KIF3AQ9Y496 699 aa15.18■□□□□ 0.02
CPNE4-201ENST00000429747 MAP7D2Q96T17 732 aa15.18■□□□□ 0.02
CPNE4-201ENST00000429747 ANKRD44Q8N8A2 993 aa15.18■□□□□ 0.02
CPNE4-201ENST00000429747 DDX54Q8TDD1 881 aaKnown RBP15.18■□□□□ 0.02
CPNE4-201ENST00000429747 FSD1Q9BTV5 496 aa15.18■□□□□ 0.02
CPNE4-201ENST00000429747 USP19O94966 1318 aa15.18■□□□□ 0.02
CPNE4-201ENST00000429747 SASS6Q6UVJ0 657 aa15.17■□□□□ 0.02
CPNE4-201ENST00000429747 PLEKHM2Q8IWE5 1019 aa15.17■□□□□ 0.02
CPNE4-201ENST00000429747 ZGPATQ8N5A5 531 aaKnown RBP15.17■□□□□ 0.02
CPNE4-201ENST00000429747 SAMD9LQ8IVG5 1584 aa15.17■□□□□ 0.02
CPNE4-201ENST00000429747 DDX58O95786 925 aaKnown RBP15.17■□□□□ 0.02
CPNE4-201ENST00000429747 PSME1Q06323 249 aa15.17■□□□□ 0.02
CPNE4-201ENST00000429747 OTUD7AQ8TE49 926 aaPredicted RBP15.17■□□□□ 0.02
CPNE4-201ENST00000429747 PUS7Q96PZ0 661 aaKnown RBP15.17■□□□□ 0.02
CPNE4-201ENST00000429747 LRRFIP2Q9Y608 721 aaKnown RBP15.17■□□□□ 0.02
CPNE4-201ENST00000429747 DCTPP1Q9H773 170 aa15.16■□□□□ 0.02
CPNE4-201ENST00000429747 TMX3Q96JJ7 454 aa15.16■□□□□ 0.02
CPNE4-201ENST00000429747 ANTXR1Q9H6X2 564 aa15.16■□□□□ 0.02
CPNE4-201ENST00000429747 CYP46A1Q9Y6A2 500 aa15.16■□□□□ 0.02
CPNE4-201ENST00000429747 PRDM15P57071 1507 aaPredicted RBP15.16■□□□□ 0.02
CPNE4-201ENST00000429747 TAF7LQ5H9L4 462 aa15.15■□□□□ 0.02
CPNE4-201ENST00000429747 RIC3Q7Z5B4 369 aa15.15■□□□□ 0.02
CPNE4-201ENST00000429747 JAKMIP1Q96N16 626 aaKnown RBP15.15■□□□□ 0.02
CPNE4-201ENST00000429747 LETM1O95202 739 aaPredicted RBP15.15■□□□□ 0.02
CPNE4-201ENST00000429747 TRIM5Q9C035 493 aa15.15■□□□□ 0.02
CPNE4-201ENST00000429747 ATP10AO60312 1499 aa15.15■□□□□ 0.02
CPNE4-201ENST00000429747 STK3Q13188 491 aa15.15■□□□□ 0.02
CPNE4-201ENST00000429747 HSP90AB2PQ58FF8 381 aa15.15■□□□□ 0.02
CPNE4-201ENST00000429747 ERVK-7P63135 1459 aa15.15■□□□□ 0.02
CPNE4-201ENST00000429747 ABCA8O94911 1581 aa15.14■□□□□ 0.01
CPNE4-201ENST00000429747 TPM4P67936 248 aa15.14■□□□□ 0.01
CPNE4-201ENST00000429747 PKNOX2Q96KN3 472 aa15.14■□□□□ 0.01
CPNE4-201ENST00000429747 ABCC2Q92887 1545 aa15.14■□□□□ 0.01
CPNE4-201ENST00000429747 PTPRCP08575 1304 aa15.14■□□□□ 0.01
CPNE4-201ENST00000429747 PRIM1P49642 420 aaKnown RBP15.14■□□□□ 0.01
CPNE4-201ENST00000429747 FERMT3Q86UX7 667 aa15.14■□□□□ 0.01
CPNE4-201ENST00000429747 SIL1Q9H173 461 aa15.14■□□□□ 0.01
CPNE4-201ENST00000429747 PDE1AP54750 535 aa15.14■□□□□ 0.01
CPNE4-201ENST00000429747 FLIIQ13045 1269 aa15.14■□□□□ 0.01
CPNE4-201ENST00000429747 CASTP20810 708 aaKnown RBP15.14■□□□□ 0.01
CPNE4-201ENST00000429747 PSMA5P28066 241 aa15.13■□□□□ 0.01
CPNE4-201ENST00000429747 CEBPZQ03701 1054 aaKnown RBP15.13■□□□□ 0.01
CPNE4-201ENST00000429747 LARP1BQ659C4 914 aaKnown RBP15.13■□□□□ 0.01
CPNE4-201ENST00000429747 UBE2Q2Q8WVN8 375 aa15.13■□□□□ 0.01
CPNE4-201ENST00000429747 USP25Q9UHP3 1055 aa15.13■□□□□ 0.01
CPNE4-201ENST00000429747 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.13■□□□□ 0.01
CPNE4-201ENST00000429747 CCDC83Q8IWF9 413 aa15.13■□□□□ 0.01
CPNE4-201ENST00000429747 NCKAP5LQ9HCH0 1330 aa15.13■□□□□ 0.01
CPNE4-201ENST00000429747 CEP85Q6P2H3 762 aa15.12■□□□□ 0.01
CPNE4-201ENST00000429747 MTERF4Q7Z6M4 381 aaKnown RBP15.12■□□□□ 0.01
CPNE4-201ENST00000429747 GNAT3A8MTJ3 354 aa15.12■□□□□ 0.01
CPNE4-201ENST00000429747 HMGN5P82970 282 aaKnown RBP15.12■□□□□ 0.01
CPNE4-201ENST00000429747 PDRG1Q9NUG6 133 aa15.12■□□□□ 0.01
CPNE4-201ENST00000429747 PDCP20941 246 aa15.12■□□□□ 0.01
CPNE4-201ENST00000429747 CDK11BP21127 795 aaKnown RBP15.12■□□□□ 0.01
CPNE4-201ENST00000429747 USP26Q9BXU7 913 aa15.12■□□□□ 0.01
CPNE4-201ENST00000429747 ASXL2Q76L83 1435 aa15.12■□□□□ 0.01
CPNE4-201ENST00000429747 CCDC192P0DO97 292 aa15.11■□□□□ 0.01
CPNE4-201ENST00000429747 TRHP20396 242 aaPredicted RBP15.11■□□□□ 0.01
CPNE4-201ENST00000429747 NEUROD6Q96NK8 337 aa15.11■□□□□ 0.01
CPNE4-201ENST00000429747 AACSQ86V21 672 aa15.11■□□□□ 0.01
CPNE4-201ENST00000429747 SPG7Q9UQ90 795 aa15.11■□□□□ 0.01
CPNE4-201ENST00000429747 KRT85P78386 507 aa15.1■□□□□ 0.01
CPNE4-201ENST00000429747 CCDC73Q6ZRK6 1079 aa15.1■□□□□ 0.01
CPNE4-201ENST00000429747 TTC5Q8N0Z6 440 aa15.1■□□□□ 0.01
CPNE4-201ENST00000429747 USHBP1Q8N6Y0 703 aa15.1■□□□□ 0.01
CPNE4-201ENST00000429747 KIF1BPQ96EK5 621 aa15.1■□□□□ 0.01
CPNE4-201ENST00000429747 PRPF40BQ6NWY9 871 aaKnown RBP15.1■□□□□ 0.01
CPNE4-201ENST00000429747 ZNF530Q6P9A1 599 aaPredicted RBP15.1■□□□□ 0.01
CPNE4-201ENST00000429747 DNAJC2Q99543 621 aaKnown RBP15.1■□□□□ 0.01
CPNE4-201ENST00000429747 EIF4A2Q14240 407 aaKnown RBP15.09■□□□□ 0.01
CPNE4-201ENST00000429747 LRSAM1Q6UWE0 723 aa15.09■□□□□ 0.01
CPNE4-201ENST00000429747 TAF7Q15545 349 aaPredicted RBP15.09■□□□□ 0.01
CPNE4-201ENST00000429747 GAS2L3Q86XJ1 694 aa15.09■□□□□ 0.01
CPNE4-201ENST00000429747 SYNMO15061 1565 aa15.09■□□□□ 0.01
CPNE4-201ENST00000429747 ESYT1Q9BSJ8 1104 aa15.08■□□□□ 0.01
CPNE4-201ENST00000429747 TNMDQ9H2S6 317 aa15.08■□□□□ 0.01
CPNE4-201ENST00000429747 TOMM22Q9NS69 142 aa15.08■□□□□ 0.01
CPNE4-201ENST00000429747 UGGT1Q9NYU2 1555 aa15.08■□□□□ 0.01
CPNE4-201ENST00000429747 CAMK4Q16566 473 aa15.08■□□□□ 0
CPNE4-201ENST00000429747 BLOC1S2Q6QNY1 142 aa15.08■□□□□ 0
CPNE4-201ENST00000429747 ZNF518AQ6AHZ1 1483 aa15.08■□□□□ 0
CPNE4-201ENST00000429747 CCDC183Q5T5S1 534 aa15.08■□□□□ 0
CPNE4-201ENST00000429747 TRPM1Q7Z4N2 1603 aa15.08■□□□□ 0
CPNE4-201ENST00000429747 SBNO2Q9Y2G9 1366 aa15.08■□□□□ 0
CPNE4-201ENST00000429747 CFAP65Q6ZU64 1925 aaKnown RBP15.08■□□□□ 0
CPNE4-201ENST00000429747 CPLX1O14810 134 aa15.07■□□□□ 0
CPNE4-201ENST00000429747 FOXO3O43524 673 aa15.07■□□□□ 0
CPNE4-201ENST00000429747 SDF4Q9BRK5 362 aa15.07■□□□□ 0
CPNE4-201ENST00000429747 ERC1Q8IUD2 1116 aa15.07■□□□□ 0
CPNE4-201ENST00000429747 PLEKHF1Q96S99 279 aa15.07■□□□□ 0
CPNE4-201ENST00000429747 PDCL3Q9H2J4 239 aa15.07■□□□□ 0
CPNE4-201ENST00000429747 KDM5AP29375 1690 aaKnown RBP15.07■□□□□ 0
CPNE4-201ENST00000429747 CD2BP2O95400 341 aaKnown RBP15.07■□□□□ 0
CPNE4-201ENST00000429747 TPD52L1Q16890 204 aaPredicted RBP15.07■□□□□ 0
CPNE4-201ENST00000429747 ZNF771Q7L3S4 317 aaPredicted RBP15.07■□□□□ 0
CPNE4-201ENST00000429747 ATP7AQ04656 1500 aa15.07■□□□□ 0
CPNE4-201ENST00000429747 ACEP12821 1306 aa15.07■□□□□ 0
CPNE4-201ENST00000429747 GLRX3O76003 335 aaKnown RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms