RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 SMC5Q8IY18 1101 aa20.52■□□□□ 0.88
MBD4-203ENST00000429544 NBR1Q14596 966 aa20.52■□□□□ 0.88
MBD4-203ENST00000429544 GAS2L2Q8NHY3 880 aa20.52■□□□□ 0.88
MBD4-203ENST00000429544 KIAA0232Q92628 1395 aa20.52■□□□□ 0.87
MBD4-203ENST00000429544 SEC24BO95487 1268 aa20.51■□□□□ 0.87
MBD4-203ENST00000429544 CHMP4BQ9H444 224 aaKnown RBP20.51■□□□□ 0.87
MBD4-203ENST00000429544 C1orf115Q9H7X2 142 aa20.51■□□□□ 0.87
MBD4-203ENST00000429544 MIS18AQ9NYP9 233 aa20.51■□□□□ 0.87
MBD4-203ENST00000429544 PSME1Q06323 249 aa20.5■□□□□ 0.87
MBD4-203ENST00000429544 RTL1A6NKG5 1358 aa20.49■□□□□ 0.87
MBD4-203ENST00000429544 NFAT5O94916 1531 aa20.49■□□□□ 0.87
MBD4-203ENST00000429544 HAP1P54257 671 aaPredicted RBP20.49■□□□□ 0.87
MBD4-203ENST00000429544 LRRC37A3O60309 1634 aa20.49■□□□□ 0.87
MBD4-203ENST00000429544 USP19O94966 1318 aa20.49■□□□□ 0.87
MBD4-203ENST00000429544 TSPYL4Q9UJ04 414 aa20.48■□□□□ 0.87
MBD4-203ENST00000429544 SLC4A3P48751 1232 aa20.46■□□□□ 0.87
MBD4-203ENST00000429544 USHBP1Q8N6Y0 703 aa20.46■□□□□ 0.87
MBD4-203ENST00000429544 RGS12O14924 1447 aa20.46■□□□□ 0.87
MBD4-203ENST00000429544 NUCB1Q02818 461 aa20.45■□□□□ 0.86
MBD4-203ENST00000429544 ORAI2Q96SN7 254 aa20.45■□□□□ 0.86
MBD4-203ENST00000429544 ZBTB7CA1YPR0 619 aa20.45■□□□□ 0.86
MBD4-203ENST00000429544 DAXXQ9UER7 740 aaPredicted RBP20.45■□□□□ 0.86
MBD4-203ENST00000429544 GNAT3A8MTJ3 354 aa20.44■□□□□ 0.86
MBD4-203ENST00000429544 HTATSF1O43719 755 aaKnown RBP20.44■□□□□ 0.86
MBD4-203ENST00000429544 IP6K1Q92551 441 aa20.44■□□□□ 0.86
MBD4-203ENST00000429544 XPCQ01831 940 aaPredicted RBP20.43■□□□□ 0.86
MBD4-203ENST00000429544 LNPKQ9C0E8 428 aa20.43■□□□□ 0.86
MBD4-203ENST00000429544 MAP3K5Q99683 1374 aa20.43■□□□□ 0.86
MBD4-203ENST00000429544 RGPD2P0DJD1 1756 aa20.43■□□□□ 0.86
MBD4-203ENST00000429544 MSH6P52701 1360 aa20.42■□□□□ 0.86
MBD4-203ENST00000429544 PROSER2Q86WR7 435 aaPredicted RBP20.42■□□□□ 0.86
MBD4-203ENST00000429544 INTS3Q68E01 1043 aaKnown RBP20.42■□□□□ 0.86
MBD4-203ENST00000429544 CHD1LQ86WJ1 897 aa20.42■□□□□ 0.86
MBD4-203ENST00000429544 SIRT2Q8IXJ6 389 aa20.42■□□□□ 0.86
MBD4-203ENST00000429544 PTPRCP08575 1304 aa20.41■□□□□ 0.86
MBD4-203ENST00000429544 PLEKHG5O94827 1062 aa20.41■□□□□ 0.86
MBD4-203ENST00000429544 KCNH5Q8NCM2 988 aa20.41■□□□□ 0.86
MBD4-203ENST00000429544 GCC1Q96CN9 775 aa20.41■□□□□ 0.86
MBD4-203ENST00000429544 PHRF1Q9P1Y6 1649 aaKnown RBP20.4■□□□□ 0.86
MBD4-203ENST00000429544 SLC4A2P04920 1241 aa20.4■□□□□ 0.86
MBD4-203ENST00000429544 UPF2Q9HAU5 1272 aaKnown RBP20.4■□□□□ 0.86
MBD4-203ENST00000429544 TRPM3Q9HCF6 1732 aaPredicted RBP20.39■□□□□ 0.85
MBD4-203ENST00000429544 ANKRD45Q5TZF3 282 aa20.39■□□□□ 0.85
MBD4-203ENST00000429544 FAM208AQ9UK61 1670 aaKnown RBP20.38■□□□□ 0.85
MBD4-203ENST00000429544 NBPF6Q5VWK0 638 aa20.38■□□□□ 0.85
MBD4-203ENST00000429544 IL17REQ8NFR9 667 aa20.38■□□□□ 0.85
MBD4-203ENST00000429544 NBPF4Q96M43 638 aa20.38■□□□□ 0.85
MBD4-203ENST00000429544 LMOD2Q6P5Q4 547 aa20.37■□□□□ 0.85
MBD4-203ENST00000429544 SLIT3O75094 1523 aa20.37■□□□□ 0.85
MBD4-203ENST00000429544 KIF1AQ12756 1690 aa20.37■□□□□ 0.85
MBD4-203ENST00000429544 G2E3Q7L622 706 aa20.36■□□□□ 0.85
MBD4-203ENST00000429544 TBC1D32Q96NH3 1257 aa20.36■□□□□ 0.85
MBD4-203ENST00000429544 C1orf167Q5SNV9 1468 aa20.35■□□□□ 0.85
MBD4-203ENST00000429544 LRRC59Q96AG4 307 aaKnown RBP20.35■□□□□ 0.85
MBD4-203ENST00000429544 GCP02774 474 aa20.34■□□□□ 0.85
MBD4-203ENST00000429544 RTL5Q5HYW3 569 aaPredicted RBP20.34■□□□□ 0.85
MBD4-203ENST00000429544 ATP10DQ9P241 1426 aa20.34■□□□□ 0.85
MBD4-203ENST00000429544 DNAJC5Q9H3Z4 198 aa20.34■□□□□ 0.85
MBD4-203ENST00000429544 TAF7Q15545 349 aaPredicted RBP20.33■□□□□ 0.85
MBD4-203ENST00000429544 KRT28Q7Z3Y7 464 aa20.33■□□□□ 0.85
MBD4-203ENST00000429544 STK31Q9BXU1 1019 aa20.33■□□□□ 0.85
MBD4-203ENST00000429544 F6X3S4 739 aa20.32■□□□□ 0.84
MBD4-203ENST00000429544 MFAP1P55081 439 aaKnown RBP20.32■□□□□ 0.84
MBD4-203ENST00000429544 ARHGEF25Q86VW2 580 aa20.32■□□□□ 0.84
MBD4-203ENST00000429544 MEIS3Q99687 375 aa20.32■□□□□ 0.84
MBD4-203ENST00000429544 NECTIN2Q92692 538 aa20.32■□□□□ 0.84
MBD4-203ENST00000429544 C19orf44Q9H6X5 657 aa20.32■□□□□ 0.84
MBD4-203ENST00000429544 STRCP1A6NGW2 1772 aa20.32■□□□□ 0.84
MBD4-203ENST00000429544 SLC4A10Q6U841 1118 aa20.31■□□□□ 0.84
MBD4-203ENST00000429544 ANKRD44Q8N8A2 993 aa20.31■□□□□ 0.84
MBD4-203ENST00000429544 CACNA1FO60840 1977 aa20.31■□□□□ 0.84
MBD4-203ENST00000429544 LMO7Q8WWI1 1683 aa20.31■□□□□ 0.84
MBD4-203ENST00000429544 CCDC30Q5VVM6 783 aa20.31■□□□□ 0.84
MBD4-203ENST00000429544 BABAM1Q9NWV8 329 aa20.3■□□□□ 0.84
MBD4-203ENST00000429544 CEP85Q6P2H3 762 aa20.3■□□□□ 0.84
MBD4-203ENST00000429544 MED1Q15648 1581 aaPredicted RBP20.29■□□□□ 0.84
MBD4-203ENST00000429544 CEMIPQ8WUJ3 1361 aa20.29■□□□□ 0.84
MBD4-203ENST00000429544 RGPD5Q99666 1765 aa20.29■□□□□ 0.84
MBD4-203ENST00000429544 BECN1Q14457 450 aa20.29■□□□□ 0.84
MBD4-203ENST00000429544 DCTPP1Q9H773 170 aa20.29■□□□□ 0.84
MBD4-203ENST00000429544 ALS2Q96Q42 1657 aa20.28■□□□□ 0.84
MBD4-203ENST00000429544 CCT4P50991 539 aaKnown RBP20.28■□□□□ 0.84
MBD4-203ENST00000429544 BMP2KLQ5H9B9 411 aa20.28■□□□□ 0.84
MBD4-203ENST00000429544 RPAP2Q8IXW5 612 aaPredicted RBP20.28■□□□□ 0.84
MBD4-203ENST00000429544 ANKRD24Q8TF21 1146 aa20.28■□□□□ 0.84
MBD4-203ENST00000429544 FLIIQ13045 1269 aa20.28■□□□□ 0.84
MBD4-203ENST00000429544 ZNF530Q6P9A1 599 aaPredicted RBP20.28■□□□□ 0.84
MBD4-203ENST00000429544 LGR6Q9HBX8 967 aa20.28■□□□□ 0.84
MBD4-203ENST00000429544 KDM3BQ7LBC6 1761 aa20.27■□□□□ 0.84
MBD4-203ENST00000429544 TMEM94Q12767 1356 aa20.27■□□□□ 0.84
MBD4-203ENST00000429544 C22orf23Q9BZE7 217 aa20.27■□□□□ 0.84
MBD4-203ENST00000429544 SOS1Q07889 1333 aaPredicted RBP20.27■□□□□ 0.84
MBD4-203ENST00000429544 MST1RQ04912 1400 aa20.27■□□□□ 0.83
MBD4-203ENST00000429544 CAMTA1Q9Y6Y1 1673 aa20.26■□□□□ 0.83
MBD4-203ENST00000429544 ATF3P18847 181 aa20.26■□□□□ 0.83
MBD4-203ENST00000429544 FKBP5Q13451 457 aaPredicted RBP20.26■□□□□ 0.83
MBD4-203ENST00000429544 NCAPD2Q15021 1401 aa20.26■□□□□ 0.83
MBD4-203ENST00000429544 PLEKHO1Q53GL0 409 aaPredicted RBP20.26■□□□□ 0.83
MBD4-203ENST00000429544 BCL11AQ9H165 835 aa20.25■□□□□ 0.83
MBD4-203ENST00000429544 PXDNQ92626 1479 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms