RNA–Protein interactions for RNA: ENST00000429456.1

LINC01238-203, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 2,170 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-203ENST00000429456 TTC22Q5TAA0 569 aa14.27□□□□□ -0.12
LINC01238-203ENST00000429456 RPAP2Q8IXW5 612 aaPredicted RBP14.27□□□□□ -0.12
LINC01238-203ENST00000429456 GBP4Q96PP9 640 aa14.27□□□□□ -0.12
LINC01238-203ENST00000429456 RBM42Q9BTD8 480 aaKnown RBP14.27□□□□□ -0.12
LINC01238-203ENST00000429456 NALCNQ8IZF0 1738 aa14.27□□□□□ -0.12
LINC01238-203ENST00000429456 KCNA4P22459 653 aa14.27□□□□□ -0.13
LINC01238-203ENST00000429456 KRT24Q2M2I5 525 aa14.27□□□□□ -0.13
LINC01238-203ENST00000429456 RRAGDQ9NQL2 400 aaPredicted RBP14.27□□□□□ -0.13
LINC01238-203ENST00000429456 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.27□□□□□ -0.13
LINC01238-203ENST00000429456 ISY1Q9ULR0 285 aaKnown RBP14.27□□□□□ -0.13
LINC01238-203ENST00000429456 PEAK1Q9H792 1746 aa14.27□□□□□ -0.13
LINC01238-203ENST00000429456 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.27□□□□□ -0.13
LINC01238-203ENST00000429456 ARXQ96QS3 562 aa14.26□□□□□ -0.13
LINC01238-203ENST00000429456 PANK2Q9BZ23 570 aa14.26□□□□□ -0.13
LINC01238-203ENST00000429456 PTPRCP08575 1304 aa14.26□□□□□ -0.13
LINC01238-203ENST00000429456 PLEKHG3A1L390 1219 aa14.26□□□□□ -0.13
LINC01238-203ENST00000429456 CEP85Q6P2H3 762 aa14.26□□□□□ -0.13
LINC01238-203ENST00000429456 TMEM2Q9UHN6 1383 aa14.25□□□□□ -0.13
LINC01238-203ENST00000429456 PTMSP20962 102 aa14.25□□□□□ -0.13
LINC01238-203ENST00000429456 ADAMTS13Q76LX8 1427 aa14.25□□□□□ -0.13
LINC01238-203ENST00000429456 MCM10Q7L590 875 aa14.25□□□□□ -0.13
LINC01238-203ENST00000429456 UBR1Q8IWV7 1749 aa14.25□□□□□ -0.13
LINC01238-203ENST00000429456 ACEP12821 1306 aa14.25□□□□□ -0.13
LINC01238-203ENST00000429456 RTL1A6NKG5 1358 aa14.25□□□□□ -0.13
LINC01238-203ENST00000429456 TNRQ92752 1358 aa14.25□□□□□ -0.13
LINC01238-203ENST00000429456 CRB1P82279 1406 aa14.25□□□□□ -0.13
LINC01238-203ENST00000429456 HSP90AA1P07900 732 aaKnown RBP14.24□□□□□ -0.13
LINC01238-203ENST00000429456 C16orf71Q8IYS4 520 aaPredicted RBP14.24□□□□□ -0.13
LINC01238-203ENST00000429456 GAS2L2Q8NHY3 880 aa14.24□□□□□ -0.13
LINC01238-203ENST00000429456 ESF1Q9H501 851 aaKnown RBP14.24□□□□□ -0.13
LINC01238-203ENST00000429456 MSH6P52701 1360 aa14.24□□□□□ -0.13
LINC01238-203ENST00000429456 USP31Q70CQ4 1352 aa14.24□□□□□ -0.13
LINC01238-203ENST00000429456 USP6P35125 1406 aa14.24□□□□□ -0.13
LINC01238-203ENST00000429456 SKOR2Q2VWA4 1001 aaPredicted RBP14.24□□□□□ -0.13
LINC01238-203ENST00000429456 RABEP1Q15276 862 aa14.23□□□□□ -0.13
LINC01238-203ENST00000429456 HSP90AB2PQ58FF8 381 aa14.23□□□□□ -0.13
LINC01238-203ENST00000429456 CLEC17AQ6ZS10 378 aa14.23□□□□□ -0.13
LINC01238-203ENST00000429456 GRPEL1Q9HAV7 217 aa14.23□□□□□ -0.13
LINC01238-203ENST00000429456 FOXD4L1Q9NU39 408 aa14.23□□□□□ -0.13
LINC01238-203ENST00000429456 USP26Q9BXU7 913 aa14.23□□□□□ -0.13
LINC01238-203ENST00000429456 OTUD7AQ8TE49 926 aaPredicted RBP14.22□□□□□ -0.13
LINC01238-203ENST00000429456 MEIS3Q99687 375 aa14.22□□□□□ -0.13
LINC01238-203ENST00000429456 ARHGEF10O15013 1369 aa14.21□□□□□ -0.13
LINC01238-203ENST00000429456 SSH2Q76I76 1423 aa14.21□□□□□ -0.13
LINC01238-203ENST00000429456 SSFA2P28290 1259 aa14.21□□□□□ -0.13
LINC01238-203ENST00000429456 FMN2Q9NZ56 1722 aa14.2□□□□□ -0.14
LINC01238-203ENST00000429456 SMARCA5O60264 1052 aaPredicted RBP14.2□□□□□ -0.14
LINC01238-203ENST00000429456 SLC4A2P04920 1241 aa14.2□□□□□ -0.14
LINC01238-203ENST00000429456 SDSP20132 328 aa14.2□□□□□ -0.14
LINC01238-203ENST00000429456 PKNOX2Q96KN3 472 aa14.2□□□□□ -0.14
LINC01238-203ENST00000429456 PLEKHG1Q9ULL1 1385 aa14.19□□□□□ -0.14
LINC01238-203ENST00000429456 MAP3K19Q56UN5 1328 aa14.19□□□□□ -0.14
LINC01238-203ENST00000429456 GAS2L3Q86XJ1 694 aa14.19□□□□□ -0.14
LINC01238-203ENST00000429456 AK9Q5TCS8 1911 aa14.18□□□□□ -0.14
LINC01238-203ENST00000429456 NUTM2FA1L443 756 aa14.17□□□□□ -0.14
LINC01238-203ENST00000429456 HMMRO75330 724 aa14.17□□□□□ -0.14
LINC01238-203ENST00000429456 MTHFSDQ2M296 383 aaKnown RBP14.17□□□□□ -0.14
LINC01238-203ENST00000429456 CASC1Q6TDU7 716 aa14.17□□□□□ -0.14
LINC01238-203ENST00000429456 TTC21AQ8NDW8 1320 aa14.17□□□□□ -0.14
LINC01238-203ENST00000429456 GOLGA6L22H0YM25 854 aa14.17□□□□□ -0.14
LINC01238-203ENST00000429456 FOXO3O43524 673 aa14.17□□□□□ -0.14
LINC01238-203ENST00000429456 BAG4O95429 457 aaKnown RBP14.17□□□□□ -0.14
LINC01238-203ENST00000429456 LTKP29376 864 aa14.17□□□□□ -0.14
LINC01238-203ENST00000429456 G2E3Q7L622 706 aa14.17□□□□□ -0.14
LINC01238-203ENST00000429456 MIS18AQ9NYP9 233 aa14.17□□□□□ -0.14
LINC01238-203ENST00000429456 RIMS1Q86UR5 1692 aaKnown RBP14.17□□□□□ -0.14
LINC01238-203ENST00000429456 PTPRUQ92729 1446 aa14.17□□□□□ -0.14
LINC01238-203ENST00000429456 KDRP35968 1356 aa14.17□□□□□ -0.14
LINC01238-203ENST00000429456 CLCN1P35523 988 aa14.16□□□□□ -0.14
LINC01238-203ENST00000429456 CCT4P50991 539 aaKnown RBP14.16□□□□□ -0.14
LINC01238-203ENST00000429456 OSBPL3Q9H4L5 887 aa14.16□□□□□ -0.14
LINC01238-203ENST00000429456 TSPYL4Q9UJ04 414 aa14.16□□□□□ -0.14
LINC01238-203ENST00000429456 SBNO1A3KN83 1393 aa14.16□□□□□ -0.14
LINC01238-203ENST00000429456 APBB1O00213 710 aa14.16□□□□□ -0.14
LINC01238-203ENST00000429456 CYP2E1P05181 493 aaPredicted RBP14.16□□□□□ -0.14
LINC01238-203ENST00000429456 RTF1Q92541 710 aaKnown RBP14.16□□□□□ -0.14
LINC01238-203ENST00000429456 FLT4P35916 1363 aa14.15□□□□□ -0.14
LINC01238-203ENST00000429456 NUCB2P80303 420 aa14.15□□□□□ -0.14
LINC01238-203ENST00000429456 KIF13AQ9H1H9 1805 aa14.15□□□□□ -0.14
LINC01238-203ENST00000429456 SOX12O15370 315 aa14.15□□□□□ -0.15
LINC01238-203ENST00000429456 REC8O95072 547 aa14.15□□□□□ -0.15
LINC01238-203ENST00000429456 KLHL40Q2TBA0 621 aa14.15□□□□□ -0.15
LINC01238-203ENST00000429456 F6X3S4 739 aa14.14□□□□□ -0.15
LINC01238-203ENST00000429456 CWC22Q9HCG8 908 aaKnown RBP14.14□□□□□ -0.15
LINC01238-203ENST00000429456 IBTKQ9P2D0 1353 aaPredicted RBP14.14□□□□□ -0.15
LINC01238-203ENST00000429456 IGSF1Q8N6C5 1336 aa14.14□□□□□ -0.15
LINC01238-203ENST00000429456 ERC2O15083 957 aa14.13□□□□□ -0.15
LINC01238-203ENST00000429456 ST18O60284 1047 aa14.13□□□□□ -0.15
LINC01238-203ENST00000429456 PDE1AP54750 535 aa14.13□□□□□ -0.15
LINC01238-203ENST00000429456 SLC4A10Q6U841 1118 aa14.13□□□□□ -0.15
LINC01238-203ENST00000429456 CEP170BQ9Y4F5 1589 aaPredicted RBP14.13□□□□□ -0.15
LINC01238-203ENST00000429456 LRRC37A3O60309 1634 aa14.13□□□□□ -0.15
LINC01238-203ENST00000429456 EYA1Q99502 592 aa14.13□□□□□ -0.15
LINC01238-203ENST00000429456 TUBGCP6Q96RT7 1819 aa14.13□□□□□ -0.15
LINC01238-203ENST00000429456 HTATSF1O43719 755 aaKnown RBP14.12□□□□□ -0.15
LINC01238-203ENST00000429456 GNAI2P04899 355 aa14.12□□□□□ -0.15
LINC01238-203ENST00000429456 SALL3Q9BXA9 1300 aa14.12□□□□□ -0.15
LINC01238-203ENST00000429456 DDX49Q9Y6V7 483 aaKnown RBP14.12□□□□□ -0.15
LINC01238-203ENST00000429456 FAM208AQ9UK61 1670 aaKnown RBP14.11□□□□□ -0.15
LINC01238-203ENST00000429456 XRN1Q8IZH2 1706 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms