RNA–Protein interactions for RNA: ENST00000428650.5

STRC-201, Transcript of stereocilin, humanhuman

TSL 5

Gene STRC, Length 5,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-201ENST00000428650 CCDC191Q8NCU4 936 aa16.98■□□□□ 0.31
STRC-201ENST00000428650 CEP131Q9UPN4 1083 aa16.98■□□□□ 0.31
STRC-201ENST00000428650 GLRX3O76003 335 aaKnown RBP16.97■□□□□ 0.31
STRC-201ENST00000428650 ME1P48163 572 aa16.97■□□□□ 0.31
STRC-201ENST00000428650 IL16Q14005 1332 aa16.97■□□□□ 0.31
STRC-201ENST00000428650 MEX3CQ5U5Q3 659 aaKnown RBP16.97■□□□□ 0.31
STRC-201ENST00000428650 KCNH5Q8NCM2 988 aa16.97■□□□□ 0.31
STRC-201ENST00000428650 SCAF11Q99590 1463 aaKnown RBP16.97■□□□□ 0.31
STRC-201ENST00000428650 CABP4P57796 275 aa16.97■□□□□ 0.31
STRC-201ENST00000428650 MSH5O43196 834 aa16.96■□□□□ 0.31
STRC-201ENST00000428650 BRPF3Q9ULD4 1205 aa16.96■□□□□ 0.31
STRC-201ENST00000428650 CDK13Q14004 1512 aaKnown RBP16.96■□□□□ 0.31
STRC-201ENST00000428650 RARSP54136 660 aaKnown RBP16.96■□□□□ 0.31
STRC-201ENST00000428650 ESCO1Q5FWF5 840 aa16.96■□□□□ 0.31
STRC-201ENST00000428650 HSP90AB2PQ58FF8 381 aa16.96■□□□□ 0.31
STRC-201ENST00000428650 HMGB1P09429 215 aaKnown RBP16.96■□□□□ 0.3
STRC-201ENST00000428650 GNAT3A8MTJ3 354 aa16.95■□□□□ 0.3
STRC-201ENST00000428650 SRGAP3O43295 1099 aa16.95■□□□□ 0.3
STRC-201ENST00000428650 MAP3K11Q16584 847 aa16.95■□□□□ 0.3
STRC-201ENST00000428650 AACSQ86V21 672 aa16.95■□□□□ 0.3
STRC-201ENST00000428650 SCAND2PQ9GZW5 306 aaPredicted RBP16.95■□□□□ 0.3
STRC-201ENST00000428650 CCDC61Q9Y6R9 512 aa16.95■□□□□ 0.3
STRC-201ENST00000428650 PTPRCP08575 1304 aa16.95■□□□□ 0.3
STRC-201ENST00000428650 TMEM57Q8N5G2 664 aa16.95■□□□□ 0.3
STRC-201ENST00000428650 CTAGE5O15320 804 aa16.94■□□□□ 0.3
STRC-201ENST00000428650 MCM5P33992 734 aa16.94■□□□□ 0.3
STRC-201ENST00000428650 SYCP1Q15431 976 aa16.94■□□□□ 0.3
STRC-201ENST00000428650 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.94■□□□□ 0.3
STRC-201ENST00000428650 TAF3Q5VWG9 929 aa16.94■□□□□ 0.3
STRC-201ENST00000428650 GBP3Q9H0R5 595 aa16.94■□□□□ 0.3
STRC-201ENST00000428650 GOLGA6L10A6NI86 522 aa16.94■□□□□ 0.3
STRC-201ENST00000428650 H0YHG0 523 aa16.94■□□□□ 0.3
STRC-201ENST00000428650 JAKMIP1Q96N16 626 aaKnown RBP16.94■□□□□ 0.3
STRC-201ENST00000428650 PROSER2Q86WR7 435 aaPredicted RBP16.93■□□□□ 0.3
STRC-201ENST00000428650 CEP126Q9P2H0 1117 aa16.93■□□□□ 0.3
STRC-201ENST00000428650 NEMFO60524 1076 aa16.93■□□□□ 0.3
STRC-201ENST00000428650 MX1P20591 662 aa16.93■□□□□ 0.3
STRC-201ENST00000428650 CALRP27797 417 aaKnown RBP16.93■□□□□ 0.3
STRC-201ENST00000428650 CCDC183Q5T5S1 534 aa16.93■□□□□ 0.3
STRC-201ENST00000428650 AKAP2Q9Y2D5 859 aa16.93■□□□□ 0.3
STRC-201ENST00000428650 UPF3BQ9BZI7 483 aaKnown RBP16.92■□□□□ 0.3
STRC-201ENST00000428650 IMMTQ16891 758 aaKnown RBP16.92■□□□□ 0.3
STRC-201ENST00000428650 SOGA3Q5TF21 947 aa16.91■□□□□ 0.3
STRC-201ENST00000428650 PHAXQ9H814 394 aaKnown RBP16.91■□□□□ 0.3
STRC-201ENST00000428650 U3KPZ7 1027 aaPredicted RBP16.91■□□□□ 0.3
STRC-201ENST00000428650 RALGAPBQ86X10 1494 aa16.91■□□□□ 0.3
STRC-201ENST00000428650 FYB1O15117 783 aa16.91■□□□□ 0.3
STRC-201ENST00000428650 CAVIN2O95810 425 aa16.91■□□□□ 0.3
STRC-201ENST00000428650 AMOTQ4VCS5 1084 aa16.91■□□□□ 0.3
STRC-201ENST00000428650 NUP160Q12769 1436 aa16.91■□□□□ 0.3
STRC-201ENST00000428650 BTBD11A6QL63 1104 aa16.91■□□□□ 0.3
STRC-201ENST00000428650 KRT18P05783 430 aaKnown RBP16.91■□□□□ 0.3
STRC-201ENST00000428650 NUTM2GQ5VZR2 741 aa16.91■□□□□ 0.3
STRC-201ENST00000428650 BMP2KQ9NSY1 1161 aaPredicted RBP16.91■□□□□ 0.3
STRC-201ENST00000428650 BIVM-ERCC5R4GMW8 1640 aa16.9■□□□□ 0.3
STRC-201ENST00000428650 FMNL2Q96PY5 1086 aa16.9■□□□□ 0.3
STRC-201ENST00000428650 UQCRHLA0A096LP55 91 aa16.9■□□□□ 0.3
STRC-201ENST00000428650 UQCRHP07919 91 aa16.9■□□□□ 0.3
STRC-201ENST00000428650 SPC24Q8NBT2 197 aa16.9■□□□□ 0.3
STRC-201ENST00000428650 ANO10Q9NW15 660 aa16.9■□□□□ 0.3
STRC-201ENST00000428650 ZSCAN12O43309 604 aa16.89■□□□□ 0.3
STRC-201ENST00000428650 LARP1Q6PKG0 1096 aaKnown RBP16.89■□□□□ 0.3
STRC-201ENST00000428650 MCM3P25205 808 aa16.89■□□□□ 0.29
STRC-201ENST00000428650 CCDC181Q5TID7 509 aa16.89■□□□□ 0.29
STRC-201ENST00000428650 NUDT16Q96DE0 195 aaKnown RBP16.89■□□□□ 0.29
STRC-201ENST00000428650 TTC21BQ7Z4L5 1316 aa16.89■□□□□ 0.29
STRC-201ENST00000428650 PEG3Q9GZU2 1588 aa16.89■□□□□ 0.29
STRC-201ENST00000428650 CCDC184Q52MB2 194 aa16.89■□□□□ 0.29
STRC-201ENST00000428650 USP8P40818 1118 aa16.88■□□□□ 0.29
STRC-201ENST00000428650 ARHGEF11O15085 1522 aa16.88■□□□□ 0.29
STRC-201ENST00000428650 ANKRD18AQ8IVF6 992 aa16.88■□□□□ 0.29
STRC-201ENST00000428650 GOLGA6L7A0A1B0GV03 622 aa16.88■□□□□ 0.29
STRC-201ENST00000428650 BMP2KLQ5H9B9 411 aa16.88■□□□□ 0.29
STRC-201ENST00000428650 UBAC1Q9BSL1 405 aa16.88■□□□□ 0.29
STRC-201ENST00000428650 DEF6Q9H4E7 631 aa16.88■□□□□ 0.29
STRC-201ENST00000428650 ANKRD36BQ8N2N9 1353 aa16.88■□□□□ 0.29
STRC-201ENST00000428650 CCDC196A0A1B0GTZ2 297 aa16.88■□□□□ 0.29
STRC-201ENST00000428650 ZRSR2Q15696 482 aaKnown RBP16.88■□□□□ 0.29
STRC-201ENST00000428650 UVSSAQ2YD98 709 aa16.88■□□□□ 0.29
STRC-201ENST00000428650 ANKLE2Q86XL3 938 aa16.88■□□□□ 0.29
STRC-201ENST00000428650 AXDND1Q5T1B0 1012 aaPredicted RBP16.87■□□□□ 0.29
STRC-201ENST00000428650 DUSP27Q5VZP5 1158 aa16.87■□□□□ 0.29
STRC-201ENST00000428650 ZNF287Q9HBT7 754 aa16.87■□□□□ 0.29
STRC-201ENST00000428650 MPHOSPH8Q99549 860 aa16.87■□□□□ 0.29
STRC-201ENST00000428650 KIAA0754O94854 1291 aa16.87■□□□□ 0.29
STRC-201ENST00000428650 CWC27Q6UX04 472 aaKnown RBP16.87■□□□□ 0.29
STRC-201ENST00000428650 ARHGAP45Q92619 1136 aa16.87■□□□□ 0.29
STRC-201ENST00000428650 RBM42Q9BTD8 480 aaKnown RBP16.86■□□□□ 0.29
STRC-201ENST00000428650 IKQ13123 557 aaPredicted RBP16.86■□□□□ 0.29
STRC-201ENST00000428650 DDX19AQ9NUU7 478 aaKnown RBP16.86■□□□□ 0.29
STRC-201ENST00000428650 CASTP20810 708 aaKnown RBP16.86■□□□□ 0.29
STRC-201ENST00000428650 STK3Q13188 491 aa16.86■□□□□ 0.29
STRC-201ENST00000428650 SSH1Q8WYL5 1049 aa16.86■□□□□ 0.29
STRC-201ENST00000428650 CEBPZQ03701 1054 aaKnown RBP16.86■□□□□ 0.29
STRC-201ENST00000428650 TAF7Q15545 349 aaPredicted RBP16.86■□□□□ 0.29
STRC-201ENST00000428650 ATP2B1P20020 1258 aa16.85■□□□□ 0.29
STRC-201ENST00000428650 CCDC148Q8NFR7 591 aa16.85■□□□□ 0.29
STRC-201ENST00000428650 WWC2Q6AWC2 1192 aa16.85■□□□□ 0.29
STRC-201ENST00000428650 ZNF397Q8NF99 534 aaPredicted RBP16.84■□□□□ 0.29
STRC-201ENST00000428650 LIMCH1Q9UPQ0 1083 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms