RNA–Protein interactions for RNA: ENST00000428413.5

SCAP-206, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 3,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-206ENST00000428413 LRRCC1Q9C099 1032 aa18.35■□□□□ 0.53
SCAP-206ENST00000428413 LTKP29376 864 aa18.35■□□□□ 0.53
SCAP-206ENST00000428413 GSPT1P15170 499 aaKnown RBP18.35■□□□□ 0.53
SCAP-206ENST00000428413 TCEANC2Q96MN5 208 aa18.35■□□□□ 0.53
SCAP-206ENST00000428413 MAP3K19Q56UN5 1328 aa18.35■□□□□ 0.53
SCAP-206ENST00000428413 CPA1P15085 419 aa18.34■□□□□ 0.53
SCAP-206ENST00000428413 C1orf141Q5JVX7 400 aa18.34■□□□□ 0.53
SCAP-206ENST00000428413 CCDC30Q5VVM6 783 aa18.34■□□□□ 0.53
SCAP-206ENST00000428413 ZNF530Q6P9A1 599 aaPredicted RBP18.34■□□□□ 0.53
SCAP-206ENST00000428413 METP08581 1390 aa18.34■□□□□ 0.53
SCAP-206ENST00000428413 IQGAP3Q86VI3 1631 aa18.34■□□□□ 0.53
SCAP-206ENST00000428413 CCDC85AQ96PX6 553 aaPredicted RBP18.34■□□□□ 0.53
SCAP-206ENST00000428413 MRE11P49959 708 aa18.34■□□□□ 0.53
SCAP-206ENST00000428413 DIAPH3Q9NSV4 1193 aa18.34■□□□□ 0.53
SCAP-206ENST00000428413 ABCC11Q96J66 1382 aa18.33■□□□□ 0.53
SCAP-206ENST00000428413 ERC2O15083 957 aa18.33■□□□□ 0.52
SCAP-206ENST00000428413 KDM5AP29375 1690 aaKnown RBP18.33■□□□□ 0.52
SCAP-206ENST00000428413 FIBPO43427 364 aa18.33■□□□□ 0.52
SCAP-206ENST00000428413 CEP85Q6P2H3 762 aa18.33■□□□□ 0.52
SCAP-206ENST00000428413 RIMS2Q9UQ26 1411 aa18.32■□□□□ 0.52
SCAP-206ENST00000428413 SYCE3A1L190 88 aa18.32■□□□□ 0.52
SCAP-206ENST00000428413 STK3Q13188 491 aa18.32■□□□□ 0.52
SCAP-206ENST00000428413 TTC22Q5TAA0 569 aa18.32■□□□□ 0.52
SCAP-206ENST00000428413 POGZQ7Z3K3 1410 aa18.31■□□□□ 0.52
SCAP-206ENST00000428413 PNMA6EA0A0J9YXQ4 647 aa18.31■□□□□ 0.52
SCAP-206ENST00000428413 PI4KAP2A4QPH2 592 aa18.31■□□□□ 0.52
SCAP-206ENST00000428413 RABEP1Q15276 862 aa18.31■□□□□ 0.52
SCAP-206ENST00000428413 FERMT3Q86UX7 667 aa18.31■□□□□ 0.52
SCAP-206ENST00000428413 PI4KAP1Q8N8J0 262 aa18.31■□□□□ 0.52
SCAP-206ENST00000428413 GOLGA6L4A6NEF3 574 aa18.31■□□□□ 0.52
SCAP-206ENST00000428413 GNAT3A8MTJ3 354 aa18.31■□□□□ 0.52
SCAP-206ENST00000428413 IFIT2P09913 472 aaKnown RBP18.31■□□□□ 0.52
SCAP-206ENST00000428413 RPAP2Q8IXW5 612 aaPredicted RBP18.31■□□□□ 0.52
SCAP-206ENST00000428413 MADDQ8WXG6 1647 aa18.31■□□□□ 0.52
SCAP-206ENST00000428413 NSD2O96028 1365 aa18.3■□□□□ 0.52
SCAP-206ENST00000428413 PA2G4Q9UQ80 394 aaKnown RBP18.3■□□□□ 0.52
SCAP-206ENST00000428413 IL16Q14005 1332 aa18.29■□□□□ 0.52
SCAP-206ENST00000428413 PRR36Q9H6K5 1346 aa18.29■□□□□ 0.52
SCAP-206ENST00000428413 BAG4O95429 457 aaKnown RBP18.29■□□□□ 0.52
SCAP-206ENST00000428413 MX1P20591 662 aa18.29■□□□□ 0.52
SCAP-206ENST00000428413 SLC39A6Q13433 755 aa18.29■□□□□ 0.52
SCAP-206ENST00000428413 CCDC8Q9H0W5 538 aaPredicted RBP18.29■□□□□ 0.52
SCAP-206ENST00000428413 ANTXR1Q9H6X2 564 aa18.29■□□□□ 0.52
SCAP-206ENST00000428413 MSH6P52701 1360 aa18.29■□□□□ 0.52
SCAP-206ENST00000428413 SRCIN1Q9C0H9 1055 aa18.28■□□□□ 0.52
SCAP-206ENST00000428413 KCNQ3O43525 872 aa18.28■□□□□ 0.52
SCAP-206ENST00000428413 RIC3Q7Z5B4 369 aa18.28■□□□□ 0.52
SCAP-206ENST00000428413 GAS2L3Q86XJ1 694 aa18.28■□□□□ 0.52
SCAP-206ENST00000428413 PHF23Q9BUL5 403 aaPredicted RBP18.28■□□□□ 0.52
SCAP-206ENST00000428413 LGR6Q9HBX8 967 aa18.28■□□□□ 0.52
SCAP-206ENST00000428413 UNC13BO14795 1591 aa18.28■□□□□ 0.52
SCAP-206ENST00000428413 GNAI3P08754 354 aa18.28■□□□□ 0.52
SCAP-206ENST00000428413 CEBPZQ03701 1054 aaKnown RBP18.28■□□□□ 0.52
SCAP-206ENST00000428413 PPP1R42Q7Z4L9 355 aa18.28■□□□□ 0.52
SCAP-206ENST00000428413 ANKRD44Q8N8A2 993 aa18.28■□□□□ 0.52
SCAP-206ENST00000428413 HSP90B1P14625 803 aaKnown RBP18.27■□□□□ 0.52
SCAP-206ENST00000428413 KCNA6P17658 529 aa18.27■□□□□ 0.52
SCAP-206ENST00000428413 DCTPP1Q9H773 170 aa18.27■□□□□ 0.52
SCAP-206ENST00000428413 BTBD11A6QL63 1104 aa18.27■□□□□ 0.52
SCAP-206ENST00000428413 PDE1AP54750 535 aa18.27■□□□□ 0.52
SCAP-206ENST00000428413 NEUROD6Q96NK8 337 aa18.26■□□□□ 0.51
SCAP-206ENST00000428413 CHPF2Q9P2E5 772 aa18.26■□□□□ 0.51
SCAP-206ENST00000428413 NUCB2P80303 420 aa18.26■□□□□ 0.51
SCAP-206ENST00000428413 CCT4P50991 539 aaKnown RBP18.26■□□□□ 0.51
SCAP-206ENST00000428413 DDX17Q92841 729 aaKnown RBP18.25■□□□□ 0.51
SCAP-206ENST00000428413 ESPNB1AK53 854 aa18.25■□□□□ 0.51
SCAP-206ENST00000428413 DRC7Q8IY82 874 aa18.25■□□□□ 0.51
SCAP-206ENST00000428413 KLHDC4Q8TBB5 520 aa18.25■□□□□ 0.51
SCAP-206ENST00000428413 CABLES1Q8TDN4 633 aa18.25■□□□□ 0.51
SCAP-206ENST00000428413 DNAJC2Q99543 621 aaKnown RBP18.25■□□□□ 0.51
SCAP-206ENST00000428413 FAM13BQ9NYF5 915 aa18.25■□□□□ 0.51
SCAP-206ENST00000428413 R3HCC1Q9Y3T6 440 aaKnown RBP18.25■□□□□ 0.51
SCAP-206ENST00000428413 ZMYM3Q14202 1370 aa18.25■□□□□ 0.51
SCAP-206ENST00000428413 CWF19L2Q2TBE0 894 aaKnown RBP18.24■□□□□ 0.51
SCAP-206ENST00000428413 BOLA2Q9H3K6 86 aa18.24■□□□□ 0.51
SCAP-206ENST00000428413 NDUFB9Q9Y6M9 179 aa18.24■□□□□ 0.51
SCAP-206ENST00000428413 SKOR2Q2VWA4 1001 aaPredicted RBP18.24■□□□□ 0.51
SCAP-206ENST00000428413 POLR1AO95602 1720 aaPredicted RBP18.24■□□□□ 0.51
SCAP-206ENST00000428413 CHRNA2Q15822 529 aa18.23■□□□□ 0.51
SCAP-206ENST00000428413 ABCA6Q8N139 1617 aa18.23■□□□□ 0.51
SCAP-206ENST00000428413 SBNO2Q9Y2G9 1366 aa18.23■□□□□ 0.51
SCAP-206ENST00000428413 CLASRPQ8N2M8 674 aaKnown RBP18.23■□□□□ 0.51
SCAP-206ENST00000428413 G3BP1Q13283 466 aaKnown RBP eCLIP18.22■□□□□ 0.51
SCAP-206ENST00000428413 AACSQ86V21 672 aa18.22■□□□□ 0.51
SCAP-206ENST00000428413 FAM177BA6PVY3 158 aa18.22■□□□□ 0.51
SCAP-206ENST00000428413 SMC3Q9UQE7 1217 aa18.22■□□□□ 0.51
SCAP-206ENST00000428413 UNC5CLQ8IV45 518 aa18.22■□□□□ 0.51
SCAP-206ENST00000428413 USP26Q9BXU7 913 aa18.22■□□□□ 0.51
SCAP-206ENST00000428413 PLXNC1O60486 1568 aa18.22■□□□□ 0.51
SCAP-206ENST00000428413 MAP3K4Q9Y6R4 1608 aa18.21■□□□□ 0.51
SCAP-206ENST00000428413 NBPF7P0C2Y1 421 aaPredicted RBP18.21■□□□□ 0.51
SCAP-206ENST00000428413 TMX3Q96JJ7 454 aa18.21■□□□□ 0.51
SCAP-206ENST00000428413 PALD1Q9ULE6 856 aa18.21■□□□□ 0.51
SCAP-206ENST00000428413 ATP5J2-PTCD1G3V325 749 aa18.21■□□□□ 0.51
SCAP-206ENST00000428413 CHL1O00533 1208 aa18.21■□□□□ 0.51
SCAP-206ENST00000428413 PTCD1O75127 700 aaKnown RBP18.21■□□□□ 0.51
SCAP-206ENST00000428413 ARHGAP45Q92619 1136 aa18.21■□□□□ 0.51
SCAP-206ENST00000428413 PRPF40BQ6NWY9 871 aaKnown RBP18.21■□□□□ 0.51
SCAP-206ENST00000428413 CCDC83Q8IWF9 413 aa18.21■□□□□ 0.51
SCAP-206ENST00000428413 FSD1Q9BTV5 496 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms