RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 ST5P78524 1137 aa11.8□□□□□ -0.52
CLTCL1-202ENST00000427926 GNAT3A8MTJ3 354 aa11.79□□□□□ -0.52
CLTCL1-202ENST00000427926 MSH6P52701 1360 aa11.79□□□□□ -0.52
CLTCL1-202ENST00000427926 SETQ01105 290 aaPredicted RBP11.79□□□□□ -0.52
CLTCL1-202ENST00000427926 FILIP1LQ4L180 1135 aa11.79□□□□□ -0.52
CLTCL1-202ENST00000427926 EXOSC9Q06265 439 aaKnown RBP11.79□□□□□ -0.52
CLTCL1-202ENST00000427926 ATF7IPQ6VMQ6 1270 aa11.79□□□□□ -0.52
CLTCL1-202ENST00000427926 MKNK2Q9HBH9 465 aa11.79□□□□□ -0.52
CLTCL1-202ENST00000427926 TRMT112Q9UI30 125 aaKnown RBP11.79□□□□□ -0.52
CLTCL1-202ENST00000427926 AMOTL2Q9Y2J4 779 aa11.79□□□□□ -0.52
CLTCL1-202ENST00000427926 AACSQ86V21 672 aa11.79□□□□□ -0.52
CLTCL1-202ENST00000427926 STIM1Q13586 685 aa11.79□□□□□ -0.52
CLTCL1-202ENST00000427926 STK38Q15208 465 aa11.79□□□□□ -0.52
CLTCL1-202ENST00000427926 JMYQ8N9B5 988 aa11.79□□□□□ -0.52
CLTCL1-202ENST00000427926 SEC63Q9UGP8 760 aaKnown RBP11.79□□□□□ -0.52
CLTCL1-202ENST00000427926 AAMPQ13685 434 aa11.78□□□□□ -0.52
CLTCL1-202ENST00000427926 CAGE1Q8TC20 777 aa11.78□□□□□ -0.52
CLTCL1-202ENST00000427926 PANK1Q8TE04 598 aa11.78□□□□□ -0.52
CLTCL1-202ENST00000427926 ZNF396Q96N95 335 aaPredicted RBP11.78□□□□□ -0.52
CLTCL1-202ENST00000427926 TANGO6Q9C0B7 1094 aa11.78□□□□□ -0.52
CLTCL1-202ENST00000427926 CTNNA3Q9UI47 895 aa11.78□□□□□ -0.52
CLTCL1-202ENST00000427926 KRT28Q7Z3Y7 464 aa11.78□□□□□ -0.52
CLTCL1-202ENST00000427926 BRD4O60885 1362 aaPredicted RBP11.78□□□□□ -0.52
CLTCL1-202ENST00000427926 NUCB2P80303 420 aa11.78□□□□□ -0.52
CLTCL1-202ENST00000427926 AMOTQ4VCS5 1084 aa11.78□□□□□ -0.52
CLTCL1-202ENST00000427926 AKAP2Q9Y2D5 859 aa11.78□□□□□ -0.52
CLTCL1-202ENST00000427926 KIAA1107Q9UPP5 1409 aa11.78□□□□□ -0.52
CLTCL1-202ENST00000427926 CUL7Q14999 1698 aa11.77□□□□□ -0.52
CLTCL1-202ENST00000427926 CA8P35219 290 aa11.77□□□□□ -0.52
CLTCL1-202ENST00000427926 PIBF1Q8WXW3 757 aa11.77□□□□□ -0.52
CLTCL1-202ENST00000427926 DRC1Q96MC2 740 aa11.77□□□□□ -0.53
CLTCL1-202ENST00000427926 GRIN2AQ12879 1464 aa11.77□□□□□ -0.53
CLTCL1-202ENST00000427926 KINO60870 393 aaKnown RBP11.77□□□□□ -0.53
CLTCL1-202ENST00000427926 PDCP20941 246 aa11.77□□□□□ -0.53
CLTCL1-202ENST00000427926 CCDC96Q2M329 555 aa11.77□□□□□ -0.53
CLTCL1-202ENST00000427926 SUPT6HQ7KZ85 1726 aaKnown RBP11.77□□□□□ -0.53
CLTCL1-202ENST00000427926 DDX46Q7L014 1031 aaKnown RBP11.77□□□□□ -0.53
CLTCL1-202ENST00000427926 CUL5Q93034 780 aa11.77□□□□□ -0.53
CLTCL1-202ENST00000427926 LRRCC1Q9C099 1032 aa11.77□□□□□ -0.53
CLTCL1-202ENST00000427926 A0A087WZG4 1122 aa11.76□□□□□ -0.53
CLTCL1-202ENST00000427926 CDKL5O76039 1030 aa11.76□□□□□ -0.53
CLTCL1-202ENST00000427926 NF2P35240 595 aa11.76□□□□□ -0.53
CLTCL1-202ENST00000427926 BRPF1P55201 1214 aaPredicted RBP11.76□□□□□ -0.53
CLTCL1-202ENST00000427926 VTI1AQ96AJ9 217 aa11.76□□□□□ -0.53
CLTCL1-202ENST00000427926 MPHOSPH6Q99547 160 aaKnown RBP11.76□□□□□ -0.53
CLTCL1-202ENST00000427926 SMARCE1Q969G3 411 aa11.76□□□□□ -0.53
CLTCL1-202ENST00000427926 CDK13Q14004 1512 aaKnown RBP11.76□□□□□ -0.53
CLTCL1-202ENST00000427926 ANKRD30BQ9BXX2 1392 aa11.76□□□□□ -0.53
CLTCL1-202ENST00000427926 SRGAP3O43295 1099 aa11.76□□□□□ -0.53
CLTCL1-202ENST00000427926 AKNAQ7Z591 1439 aa11.76□□□□□ -0.53
CLTCL1-202ENST00000427926 EPRSP07814 1512 aaKnown RBP11.76□□□□□ -0.53
CLTCL1-202ENST00000427926 TTLL5Q6EMB2 1281 aa11.76□□□□□ -0.53
CLTCL1-202ENST00000427926 C1orf115Q9H7X2 142 aa11.76□□□□□ -0.53
CLTCL1-202ENST00000427926 DAPK1P53355 1430 aa11.75□□□□□ -0.53
CLTCL1-202ENST00000427926 IFIT5Q13325 482 aaKnown RBP11.75□□□□□ -0.53
CLTCL1-202ENST00000427926 NBPF1Q3BBV0 1214 aa11.75□□□□□ -0.53
CLTCL1-202ENST00000427926 EHMT1Q9H9B1 1298 aa11.75□□□□□ -0.53
CLTCL1-202ENST00000427926 SLC5A1P13866 664 aa11.75□□□□□ -0.53
CLTCL1-202ENST00000427926 CABP5Q9NP86 173 aa11.74□□□□□ -0.53
CLTCL1-202ENST00000427926 SEPT11Q9NVA2 429 aaKnown RBP11.74□□□□□ -0.53
CLTCL1-202ENST00000427926 ADAMTS8Q9UP79 889 aa11.74□□□□□ -0.53
CLTCL1-202ENST00000427926 PPP2R1AP30153 589 aa11.74□□□□□ -0.53
CLTCL1-202ENST00000427926 WAPLQ7Z5K2 1190 aa11.74□□□□□ -0.53
CLTCL1-202ENST00000427926 ZNHIT6Q9NWK9 470 aaKnown RBP11.74□□□□□ -0.53
CLTCL1-202ENST00000427926 IQGAP2Q13576 1575 aa11.74□□□□□ -0.53
CLTCL1-202ENST00000427926 ZNF444Q8N0Y2 327 aaPredicted RBP11.74□□□□□ -0.53
CLTCL1-202ENST00000427926 USHBP1Q8N6Y0 703 aa11.74□□□□□ -0.53
CLTCL1-202ENST00000427926 TEX13AQ9BXU3 409 aaPredicted RBP11.74□□□□□ -0.53
CLTCL1-202ENST00000427926 ANKRD1Q15327 319 aa11.74□□□□□ -0.53
CLTCL1-202ENST00000427926 BEGAINQ9BUH8 593 aa11.74□□□□□ -0.53
CLTCL1-202ENST00000427926 HDAC9Q9UKV0 1011 aa11.74□□□□□ -0.53
CLTCL1-202ENST00000427926 CYP46A1Q9Y6A2 500 aa11.74□□□□□ -0.53
CLTCL1-202ENST00000427926 LARP1Q6PKG0 1096 aaKnown RBP11.73□□□□□ -0.53
CLTCL1-202ENST00000427926 LUC7LQ9NQ29 371 aaKnown RBP11.73□□□□□ -0.53
CLTCL1-202ENST00000427926 WDR70Q9NW82 654 aa11.73□□□□□ -0.53
CLTCL1-202ENST00000427926 MINDY4BA8MYZ0 360 aa11.73□□□□□ -0.53
CLTCL1-202ENST00000427926 STK3Q13188 491 aa11.73□□□□□ -0.53
CLTCL1-202ENST00000427926 TSR2Q969E8 191 aaKnown RBP11.73□□□□□ -0.53
CLTCL1-202ENST00000427926 CEBPZQ03701 1054 aaKnown RBP11.73□□□□□ -0.53
CLTCL1-202ENST00000427926 MAP4K4O95819 1239 aaPredicted RBP11.73□□□□□ -0.53
CLTCL1-202ENST00000427926 MYD88Q99836 296 aa11.73□□□□□ -0.53
CLTCL1-202ENST00000427926 FAM13BQ9NYF5 915 aa11.73□□□□□ -0.53
CLTCL1-202ENST00000427926 NOB1Q9ULX3 412 aaKnown RBP11.73□□□□□ -0.53
CLTCL1-202ENST00000427926 ANKRD18BA2A2Z9 1011 aa11.73□□□□□ -0.53
CLTCL1-202ENST00000427926 POTEJP0CG39 1038 aa11.73□□□□□ -0.53
CLTCL1-202ENST00000427926 NBPF6Q5VWK0 638 aa11.73□□□□□ -0.53
CLTCL1-202ENST00000427926 NBPF5PQ86XG9 351 aaPredicted RBP11.73□□□□□ -0.53
CLTCL1-202ENST00000427926 MNS1Q8NEH6 495 aa11.73□□□□□ -0.53
CLTCL1-202ENST00000427926 NBPF4Q96M43 638 aa11.73□□□□□ -0.53
CLTCL1-202ENST00000427926 NEFHP12036 1026 aa11.72□□□□□ -0.53
CLTCL1-202ENST00000427926 PPP1R42Q7Z4L9 355 aa11.72□□□□□ -0.53
CLTCL1-202ENST00000427926 CDC5LQ99459 802 aaKnown RBP11.72□□□□□ -0.53
CLTCL1-202ENST00000427926 IMMTQ16891 758 aaKnown RBP11.72□□□□□ -0.53
CLTCL1-202ENST00000427926 WASF1Q92558 559 aa11.72□□□□□ -0.53
CLTCL1-202ENST00000427926 C22orf23Q9BZE7 217 aa11.72□□□□□ -0.53
CLTCL1-202ENST00000427926 GPTP24298 496 aa11.72□□□□□ -0.53
CLTCL1-202ENST00000427926 MAP3K12Q12852 859 aa11.72□□□□□ -0.53
CLTCL1-202ENST00000427926 GCC1Q96CN9 775 aa11.72□□□□□ -0.53
CLTCL1-202ENST00000427926 FMNL2Q96PY5 1086 aa11.72□□□□□ -0.53
CLTCL1-202ENST00000427926 DEF6Q9H4E7 631 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms