RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 GPHNQ9NQX3 736 aaPredicted RBP10.23□□□□□ -0.77
LINC01049-201ENST00000426840 LRP6O75581 1613 aa10.22□□□□□ -0.77
LINC01049-201ENST00000426840 DSG2Q14126 1118 aa10.22□□□□□ -0.77
LINC01049-201ENST00000426840 ZNF710Q8N1W2 664 aa10.22□□□□□ -0.77
LINC01049-201ENST00000426840 USP19O94966 1318 aa10.22□□□□□ -0.77
LINC01049-201ENST00000426840 USP31Q70CQ4 1352 aa10.22□□□□□ -0.77
LINC01049-201ENST00000426840 MED1Q15648 1581 aaPredicted RBP10.22□□□□□ -0.77
LINC01049-201ENST00000426840 NRKQ7Z2Y5 1582 aa10.22□□□□□ -0.77
LINC01049-201ENST00000426840 PER1O15534 1290 aaPredicted RBP10.21□□□□□ -0.77
LINC01049-201ENST00000426840 ADAMTS2O95450 1211 aa10.21□□□□□ -0.77
LINC01049-201ENST00000426840 GCP02774 474 aa10.21□□□□□ -0.77
LINC01049-201ENST00000426840 DOK7Q18PE1 504 aa10.21□□□□□ -0.77
LINC01049-201ENST00000426840 LARP6Q9BRS8 491 aaKnown RBP10.21□□□□□ -0.77
LINC01049-201ENST00000426840 CRISPLD2Q9H0B8 497 aa10.21□□□□□ -0.77
LINC01049-201ENST00000426840 FAM83GA6ND36 823 aa10.2□□□□□ -0.78
LINC01049-201ENST00000426840 PIK3C2AO00443 1686 aa10.2□□□□□ -0.78
LINC01049-201ENST00000426840 PDE4AP27815 886 aa10.2□□□□□ -0.78
LINC01049-201ENST00000426840 PLCB2Q00722 1185 aa10.2□□□□□ -0.78
LINC01049-201ENST00000426840 PLPP6Q8IY26 295 aa10.2□□□□□ -0.78
LINC01049-201ENST00000426840 GGNBP2Q9H3C7 697 aa10.2□□□□□ -0.78
LINC01049-201ENST00000426840 NSD3Q9BZ95 1437 aa10.19□□□□□ -0.78
LINC01049-201ENST00000426840 HAP1P54257 671 aaPredicted RBP10.19□□□□□ -0.78
LINC01049-201ENST00000426840 ZC3H6P61129 1189 aaKnown RBP10.19□□□□□ -0.78
LINC01049-201ENST00000426840 TSHZ2Q9NRE2 1034 aa10.19□□□□□ -0.78
LINC01049-201ENST00000426840 RGS17Q9UGC6 210 aaPredicted RBP10.19□□□□□ -0.78
LINC01049-201ENST00000426840 CRYBG1Q9Y4K1 1723 aa10.19□□□□□ -0.78
LINC01049-201ENST00000426840 FOXK1P85037 733 aa10.18□□□□□ -0.78
LINC01049-201ENST00000426840 MEX3CQ5U5Q3 659 aaKnown RBP10.18□□□□□ -0.78
LINC01049-201ENST00000426840 FNBP4Q8N3X1 1017 aaPredicted RBP10.18□□□□□ -0.78
LINC01049-201ENST00000426840 KCNH5Q8NCM2 988 aa10.18□□□□□ -0.78
LINC01049-201ENST00000426840 MARVELD3Q96A59 401 aa10.18□□□□□ -0.78
LINC01049-201ENST00000426840 NGLY1Q96IV0 654 aa10.18□□□□□ -0.78
LINC01049-201ENST00000426840 C8orf37Q96NL8 207 aa10.18□□□□□ -0.78
LINC01049-201ENST00000426840 MARF1Q9Y4F3 1742 aaKnown RBP10.18□□□□□ -0.78
LINC01049-201ENST00000426840 SLIT3O75094 1523 aa10.17□□□□□ -0.78
LINC01049-201ENST00000426840 OVOS2A0A0J9YW53 1432 aa10.17□□□□□ -0.78
LINC01049-201ENST00000426840 OVOS2Q6IE36 1432 aa10.17□□□□□ -0.78
LINC01049-201ENST00000426840 ZNF316A6NFI3 1004 aaPredicted RBP10.17□□□□□ -0.78
LINC01049-201ENST00000426840 FBLN1P23142 703 aa10.17□□□□□ -0.78
LINC01049-201ENST00000426840 PPP1R15BQ5SWA1 713 aa10.17□□□□□ -0.78
LINC01049-201ENST00000426840 ARHGEF25Q86VW2 580 aa10.17□□□□□ -0.78
LINC01049-201ENST00000426840 COG3Q96JB2 828 aa10.17□□□□□ -0.78
LINC01049-201ENST00000426840 KNSTRNQ9Y448 316 aa10.17□□□□□ -0.78
LINC01049-201ENST00000426840 ABCA3Q99758 1704 aa10.16□□□□□ -0.78
LINC01049-201ENST00000426840 KIAA0232Q92628 1395 aa10.16□□□□□ -0.78
LINC01049-201ENST00000426840 AFF2P51816 1311 aa10.16□□□□□ -0.78
LINC01049-201ENST00000426840 CGNL1Q0VF96 1302 aa10.16□□□□□ -0.78
LINC01049-201ENST00000426840 PHRF1Q9P1Y6 1649 aaKnown RBP10.16□□□□□ -0.78
LINC01049-201ENST00000426840 RIMBP2O15034 1052 aa10.16□□□□□ -0.78
LINC01049-201ENST00000426840 CHRNA2Q15822 529 aa10.16□□□□□ -0.78
LINC01049-201ENST00000426840 DDX27Q96GQ7 796 aaKnown RBP10.16□□□□□ -0.78
LINC01049-201ENST00000426840 USP54Q70EL1 1684 aa10.15□□□□□ -0.78
LINC01049-201ENST00000426840 CPDO75976 1380 aa10.15□□□□□ -0.78
LINC01049-201ENST00000426840 DDX10Q13206 875 aaKnown RBP10.15□□□□□ -0.78
LINC01049-201ENST00000426840 PRDM11Q9NQV5 511 aa10.15□□□□□ -0.78
LINC01049-201ENST00000426840 SLIT2O94813 1529 aa10.14□□□□□ -0.79
LINC01049-201ENST00000426840 POTEAQ6S8J7 498 aa10.14□□□□□ -0.79
LINC01049-201ENST00000426840 KHSRPQ92945 711 aaKnown RBP eCLIP10.14□□□□□ -0.79
LINC01049-201ENST00000426840 USP21Q9UK80 565 aa10.14□□□□□ -0.79
LINC01049-201ENST00000426840 AXIN2Q9Y2T1 843 aa10.14□□□□□ -0.79
LINC01049-201ENST00000426840 BCL9LQ86UU0 1499 aa10.14□□□□□ -0.79
LINC01049-201ENST00000426840 NFAT5O94916 1531 aa10.13□□□□□ -0.79
LINC01049-201ENST00000426840 POTEMA6NI47 508 aa10.13□□□□□ -0.79
LINC01049-201ENST00000426840 ARSIQ5FYB1 569 aa10.13□□□□□ -0.79
LINC01049-201ENST00000426840 ZNF772Q68DY9 489 aaPredicted RBP10.13□□□□□ -0.79
LINC01049-201ENST00000426840 POTEGQ6S5H5 508 aa10.13□□□□□ -0.79
LINC01049-201ENST00000426840 UNC5CLQ8IV45 518 aa10.13□□□□□ -0.79
LINC01049-201ENST00000426840 BTG4Q9NY30 223 aa10.13□□□□□ -0.79
LINC01049-201ENST00000426840 AATKQ6ZMQ8 1374 aa10.13□□□□□ -0.79
LINC01049-201ENST00000426840 KIF20BQ96Q89 1820 aa10.12□□□□□ -0.79
LINC01049-201ENST00000426840 COL18A1P39060 1754 aa10.12□□□□□ -0.79
LINC01049-201ENST00000426840 ZBTB7CA1YPR0 619 aa10.12□□□□□ -0.79
LINC01049-201ENST00000426840 UPF1Q92900 1129 aaKnown RBP eCLIP10.12□□□□□ -0.79
LINC01049-201ENST00000426840 QTRT2Q9H974 415 aaKnown RBP10.12□□□□□ -0.79
LINC01049-201ENST00000426840 NSD2O96028 1365 aa10.12□□□□□ -0.79
LINC01049-201ENST00000426840 NPC1L1Q9UHC9 1359 aa10.12□□□□□ -0.79
LINC01049-201ENST00000426840 CAMTA1Q9Y6Y1 1673 aa10.12□□□□□ -0.79
LINC01049-201ENST00000426840 MAP3K19Q56UN5 1328 aa10.11□□□□□ -0.79
LINC01049-201ENST00000426840 EMP3P54852 163 aa10.11□□□□□ -0.79
LINC01049-201ENST00000426840 RRS1Q15050 365 aaKnown RBP10.11□□□□□ -0.79
LINC01049-201ENST00000426840 CC2D1BQ5T0F9 858 aaKnown RBP10.11□□□□□ -0.79
LINC01049-201ENST00000426840 MORC1Q86VD1 984 aa10.11□□□□□ -0.79
LINC01049-201ENST00000426840 IP6K1Q92551 441 aa10.11□□□□□ -0.79
LINC01049-201ENST00000426840 POLKQ9UBT6 870 aa10.11□□□□□ -0.79
LINC01049-201ENST00000426840 COL14A1Q05707 1796 aaKnown RBP10.11□□□□□ -0.79
LINC01049-201ENST00000426840 HOXB1P14653 301 aaPredicted RBP10.1□□□□□ -0.79
LINC01049-201ENST00000426840 TNNT2P45379 298 aaPredicted RBP10.1□□□□□ -0.79
LINC01049-201ENST00000426840 MFSD10Q14728 455 aa10.1□□□□□ -0.79
LINC01049-201ENST00000426840 VPS72Q15906 364 aa10.1□□□□□ -0.79
LINC01049-201ENST00000426840 TRPC5Q9UL62 973 aaPredicted RBP10.1□□□□□ -0.79
LINC01049-201ENST00000426840 LMO7Q8WWI1 1683 aa10.09□□□□□ -0.79
LINC01049-201ENST00000426840 HOXC9P31274 260 aa10.09□□□□□ -0.79
LINC01049-201ENST00000426840 EVA1CP58658 441 aa10.09□□□□□ -0.79
LINC01049-201ENST00000426840 GPR153Q6NV75 609 aa10.09□□□□□ -0.79
LINC01049-201ENST00000426840 GJD4Q96KN9 370 aaPredicted RBP10.09□□□□□ -0.79
LINC01049-201ENST00000426840 STRN4Q9NRL3 753 aa10.09□□□□□ -0.79
LINC01049-201ENST00000426840 PCDHGA4Q9Y5G9 962 aa10.09□□□□□ -0.79
LINC01049-201ENST00000426840 EMILIN1Q9Y6C2 1016 aa10.09□□□□□ -0.79
LINC01049-201ENST00000426840 PLCH1Q4KWH8 1693 aa10.09□□□□□ -0.79
LINC01049-201ENST00000426840 ATRNO75882 1429 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms