RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 PANK3Q9H999 370 aa7.91□□□□□ -1.14
HERPUD2-204ENST00000426180 GPHNQ9NQX3 736 aaPredicted RBP7.91□□□□□ -1.14
HERPUD2-204ENST00000426180 HCSTQ9UBK5 93 aa7.91□□□□□ -1.14
HERPUD2-204ENST00000426180 SPATA31A3Q5VYP0 1347 aa7.91□□□□□ -1.14
HERPUD2-204ENST00000426180 TTC21BQ7Z4L5 1316 aa7.91□□□□□ -1.14
HERPUD2-204ENST00000426180 ANKRD36BQ8N2N9 1353 aa7.91□□□□□ -1.14
HERPUD2-204ENST00000426180 TRPM3Q9HCF6 1732 aaPredicted RBP7.9□□□□□ -1.14
HERPUD2-204ENST00000426180 TNS3Q68CZ2 1445 aa7.9□□□□□ -1.14
HERPUD2-204ENST00000426180 SBNO1A3KN83 1393 aa7.9□□□□□ -1.14
HERPUD2-204ENST00000426180 NINLQ9Y2I6 1382 aa7.9□□□□□ -1.14
HERPUD2-204ENST00000426180 TBC1D12O60347 775 aa7.9□□□□□ -1.14
HERPUD2-204ENST00000426180 LMOD2Q6P5Q4 547 aa7.9□□□□□ -1.14
HERPUD2-204ENST00000426180 HDGFL2Q7Z4V5 671 aaPredicted RBP7.9□□□□□ -1.14
HERPUD2-204ENST00000426180 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.9□□□□□ -1.141e-6■■■□□ 15
HERPUD2-204ENST00000426180 TERF2IPQ9NYB0 399 aa7.9□□□□□ -1.14
HERPUD2-204ENST00000426180 PNPLA6Q8IY17 1366 aa7.89□□□□□ -1.15
HERPUD2-204ENST00000426180 NME9Q86XW9 330 aa7.89□□□□□ -1.15
HERPUD2-204ENST00000426180 HS6ST3Q8IZP7 471 aa7.89□□□□□ -1.15
HERPUD2-204ENST00000426180 CABLES1Q8TDN4 633 aa7.89□□□□□ -1.15
HERPUD2-204ENST00000426180 LRRC59Q96AG4 307 aaKnown RBP7.89□□□□□ -1.15
HERPUD2-204ENST00000426180 AKAP12Q02952 1782 aa7.89□□□□□ -1.15
HERPUD2-204ENST00000426180 NRKQ7Z2Y5 1582 aa7.88□□□□□ -1.15
HERPUD2-204ENST00000426180 EDC4Q6P2E9 1401 aaKnown RBP7.88□□□□□ -1.15
HERPUD2-204ENST00000426180 NSD3Q9BZ95 1437 aa7.88□□□□□ -1.15
HERPUD2-204ENST00000426180 TK2O00142 265 aa7.88□□□□□ -1.15
HERPUD2-204ENST00000426180 DSG2Q14126 1118 aa7.88□□□□□ -1.15
HERPUD2-204ENST00000426180 JCADQ9P266 1359 aa7.87□□□□□ -1.15
HERPUD2-204ENST00000426180 MON2Q7Z3U7 1717 aa7.87□□□□□ -1.15
HERPUD2-204ENST00000426180 ALS2Q96Q42 1657 aa7.87□□□□□ -1.15
HERPUD2-204ENST00000426180 FYB1O15117 783 aa7.87□□□□□ -1.15
HERPUD2-204ENST00000426180 PER1O15534 1290 aaPredicted RBP7.87□□□□□ -1.15
HERPUD2-204ENST00000426180 PSEN2P49810 448 aa7.87□□□□□ -1.15
HERPUD2-204ENST00000426180 DDX10Q13206 875 aaKnown RBP7.87□□□□□ -1.15
HERPUD2-204ENST00000426180 PPP4R3BQ5MIZ7 849 aa7.87□□□□□ -1.15
HERPUD2-204ENST00000426180 ABTB2Q8N961 1025 aa7.87□□□□□ -1.15
HERPUD2-204ENST00000426180 PLA2G2EQ9NZK7 142 aa7.87□□□□□ -1.15
HERPUD2-204ENST00000426180 MED1Q15648 1581 aaPredicted RBP7.87□□□□□ -1.15
HERPUD2-204ENST00000426180 BRD4O60885 1362 aaPredicted RBP7.86□□□□□ -1.15
HERPUD2-204ENST00000426180 PIK3C2AO00443 1686 aa7.86□□□□□ -1.15
HERPUD2-204ENST00000426180 TTC21AQ8NDW8 1320 aa7.86□□□□□ -1.15
HERPUD2-204ENST00000426180 NUTM2BA6NNL0 878 aaPredicted RBP7.86□□□□□ -1.15
HERPUD2-204ENST00000426180 NUTM2EB1AL46 878 aaPredicted RBP7.86□□□□□ -1.15
HERPUD2-204ENST00000426180 DMRTA1Q5VZB9 504 aa7.86□□□□□ -1.15
HERPUD2-204ENST00000426180 NUTM2AQ8IVF1 878 aaPredicted RBP7.86□□□□□ -1.15
HERPUD2-204ENST00000426180 GGNBP2Q9H3C7 697 aa7.86□□□□□ -1.15
HERPUD2-204ENST00000426180 ARHGEF10O15013 1369 aa7.85□□□□□ -1.15
HERPUD2-204ENST00000426180 LRP6O75581 1613 aa7.85□□□□□ -1.15
HERPUD2-204ENST00000426180 USP19O94966 1318 aa7.85□□□□□ -1.15
HERPUD2-204ENST00000426180 FBLN1P23142 703 aa7.85□□□□□ -1.15
HERPUD2-204ENST00000426180 CNGB1Q14028 1251 aaPredicted RBP7.85□□□□□ -1.15
HERPUD2-204ENST00000426180 AMER1Q5JTC6 1135 aaPredicted RBP7.85□□□□□ -1.15
HERPUD2-204ENST00000426180 COL22A1Q8NFW1 1626 aaPredicted RBP7.85□□□□□ -1.15
HERPUD2-204ENST00000426180 USP31Q70CQ4 1352 aa7.84□□□□□ -1.15
HERPUD2-204ENST00000426180 MARF1Q9Y4F3 1742 aaKnown RBP7.84□□□□□ -1.15
HERPUD2-204ENST00000426180 SHPRHQ149N8 1683 aa7.84□□□□□ -1.15
HERPUD2-204ENST00000426180 HRO43593 1189 aa7.84□□□□□ -1.15
HERPUD2-204ENST00000426180 KNSTRNQ9Y448 316 aa7.84□□□□□ -1.15
HERPUD2-204ENST00000426180 OVOS2A0A0J9YW53 1432 aa7.84□□□□□ -1.15
HERPUD2-204ENST00000426180 OVOS2Q6IE36 1432 aa7.84□□□□□ -1.15
HERPUD2-204ENST00000426180 CGNL1Q0VF96 1302 aa7.83□□□□□ -1.16
HERPUD2-204ENST00000426180 ADAMTS2O95450 1211 aa7.83□□□□□ -1.16
HERPUD2-204ENST00000426180 GCP02774 474 aa7.83□□□□□ -1.16
HERPUD2-204ENST00000426180 ZC3H6P61129 1189 aaKnown RBP7.83□□□□□ -1.16
HERPUD2-204ENST00000426180 NLRP13Q86W25 1043 aa7.83□□□□□ -1.16
HERPUD2-204ENST00000426180 CRYBG1Q9Y4K1 1723 aa7.83□□□□□ -1.16
HERPUD2-204ENST00000426180 SLIT3O75094 1523 aa7.83□□□□□ -1.16
HERPUD2-204ENST00000426180 SPATA31A6Q5VVP1 1343 aa7.82□□□□□ -1.16
HERPUD2-204ENST00000426180 FAM83GA6ND36 823 aa7.82□□□□□ -1.16
HERPUD2-204ENST00000426180 TNNT2P45379 298 aaPredicted RBP7.82□□□□□ -1.16
HERPUD2-204ENST00000426180 CC2D1BQ5T0F9 858 aaKnown RBP7.82□□□□□ -1.16
HERPUD2-204ENST00000426180 COG3Q96JB2 828 aa7.82□□□□□ -1.16
HERPUD2-204ENST00000426180 ABCA3Q99758 1704 aa7.82□□□□□ -1.16
HERPUD2-204ENST00000426180 NFAT5O94916 1531 aa7.82□□□□□ -1.16
HERPUD2-204ENST00000426180 PHRF1Q9P1Y6 1649 aaKnown RBP7.81□□□□□ -1.16
HERPUD2-204ENST00000426180 ZBTB7CA1YPR0 619 aa7.81□□□□□ -1.16
HERPUD2-204ENST00000426180 HAP1P54257 671 aaPredicted RBP7.81□□□□□ -1.16
HERPUD2-204ENST00000426180 CHRNA2Q15822 529 aa7.81□□□□□ -1.16
HERPUD2-204ENST00000426180 RYDENQ9NUL5 291 aaKnown RBP7.81□□□□□ -1.16
HERPUD2-204ENST00000426180 USP54Q70EL1 1684 aa7.81□□□□□ -1.16
HERPUD2-204ENST00000426180 KIAA0232Q92628 1395 aa7.81□□□□□ -1.16
HERPUD2-204ENST00000426180 RRS1Q15050 365 aaKnown RBP7.8□□□□□ -1.16
HERPUD2-204ENST00000426180 MORC1Q86VD1 984 aa7.8□□□□□ -1.16
HERPUD2-204ENST00000426180 ARHGEF25Q86VW2 580 aa7.8□□□□□ -1.16
HERPUD2-204ENST00000426180 C8orf37Q96NL8 207 aa7.8□□□□□ -1.16
HERPUD2-204ENST00000426180 KCNK17Q96T54 332 aa7.8□□□□□ -1.16
HERPUD2-204ENST00000426180 KIF20BQ96Q89 1820 aa7.8□□□□□ -1.16
HERPUD2-204ENST00000426180 MEX3CQ5U5Q3 659 aaKnown RBP7.79□□□□□ -1.16
HERPUD2-204ENST00000426180 KCNH5Q8NCM2 988 aa7.79□□□□□ -1.16
HERPUD2-204ENST00000426180 OXER1Q8TDS5 423 aa7.79□□□□□ -1.16
HERPUD2-204ENST00000426180 UPF1Q92900 1129 aaKnown RBP eCLIP7.79□□□□□ -1.16
HERPUD2-204ENST00000426180 KCTD12Q96CX2 325 aaKnown RBP7.79□□□□□ -1.16
HERPUD2-204ENST00000426180 EMILIN1Q9Y6C2 1016 aa7.79□□□□□ -1.16
HERPUD2-204ENST00000426180 CPDO75976 1380 aa7.79□□□□□ -1.16
HERPUD2-204ENST00000426180 NSD2O96028 1365 aa7.79□□□□□ -1.16
HERPUD2-204ENST00000426180 NPC1L1Q9UHC9 1359 aa7.79□□□□□ -1.16
HERPUD2-204ENST00000426180 MAP3K19Q56UN5 1328 aa7.78□□□□□ -1.16
HERPUD2-204ENST00000426180 NKX1-1Q15270 411 aaPredicted RBP7.78□□□□□ -1.16
HERPUD2-204ENST00000426180 NGLY1Q96IV0 654 aa7.78□□□□□ -1.16
HERPUD2-204ENST00000426180 PRDM11Q9NQV5 511 aa7.78□□□□□ -1.16
HERPUD2-204ENST00000426180 POLKQ9UBT6 870 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms