RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 SOX12O15370 315 aa17.54■□□□□ 0.4
TPM3P9-201ENST00000424846 SKOR2Q2VWA4 1001 aaPredicted RBP17.54■□□□□ 0.4
TPM3P9-201ENST00000424846 AATKQ6ZMQ8 1374 aa17.54■□□□□ 0.4
TPM3P9-201ENST00000424846 DLC1Q96QB1 1528 aa17.54■□□□□ 0.4
TPM3P9-201ENST00000424846 LMOD3Q0VAK6 560 aa17.54■□□□□ 0.4
TPM3P9-201ENST00000424846 TSHZ3Q63HK5 1081 aa17.54■□□□□ 0.4
TPM3P9-201ENST00000424846 RTL1A6NKG5 1358 aa17.53■□□□□ 0.4
TPM3P9-201ENST00000424846 ISY1Q9ULR0 285 aaKnown RBP17.53■□□□□ 0.4
TPM3P9-201ENST00000424846 RABEP1Q15276 862 aa17.53■□□□□ 0.4
TPM3P9-201ENST00000424846 G2E3Q7L622 706 aa17.53■□□□□ 0.4
TPM3P9-201ENST00000424846 F6X3S4 739 aa17.52■□□□□ 0.4
TPM3P9-201ENST00000424846 FOXO3O43524 673 aa17.52■□□□□ 0.4
TPM3P9-201ENST00000424846 CLEC17AQ6ZS10 378 aa17.52■□□□□ 0.4
TPM3P9-201ENST00000424846 TRIM44Q96DX7 344 aaPredicted RBP17.52■□□□□ 0.4
TPM3P9-201ENST00000424846 CCDC61Q9Y6R9 512 aa17.52■□□□□ 0.4
TPM3P9-201ENST00000424846 CHL1O00533 1208 aa17.51■□□□□ 0.39
TPM3P9-201ENST00000424846 CYP2E1P05181 493 aaPredicted RBP17.51■□□□□ 0.39
TPM3P9-201ENST00000424846 NCLP19338 710 aaKnown RBP17.51■□□□□ 0.39
TPM3P9-201ENST00000424846 KLHL40Q2TBA0 621 aa17.51■□□□□ 0.39
TPM3P9-201ENST00000424846 HSP90AB2PQ58FF8 381 aa17.51■□□□□ 0.39
TPM3P9-201ENST00000424846 CAVIN1Q6NZI2 390 aaKnown RBP17.51■□□□□ 0.39
TPM3P9-201ENST00000424846 ZDHHC9Q9Y397 364 aa17.51■□□□□ 0.39
TPM3P9-201ENST00000424846 NRXN3Q9Y4C0 1643 aa17.51■□□□□ 0.39
TPM3P9-201ENST00000424846 NASPP49321 788 aaPredicted RBP17.51■□□□□ 0.39
TPM3P9-201ENST00000424846 LMBRD1Q9NUN5 540 aa17.51■□□□□ 0.39
TPM3P9-201ENST00000424846 FOXD4L5Q5VV16 416 aaPredicted RBP17.5■□□□□ 0.39
TPM3P9-201ENST00000424846 FOXD4L4Q8WXT5 416 aaPredicted RBP17.5■□□□□ 0.39
TPM3P9-201ENST00000424846 RBM27Q9P2N5 1060 aaKnown RBP17.5■□□□□ 0.39
TPM3P9-201ENST00000424846 SLC4A2P04920 1241 aa17.5■□□□□ 0.39
TPM3P9-201ENST00000424846 SLC4A10Q6U841 1118 aa17.49■□□□□ 0.39
TPM3P9-201ENST00000424846 KIF24Q5T7B8 1368 aa17.48■□□□□ 0.39
TPM3P9-201ENST00000424846 GOLGA6L22H0YM25 854 aa17.48■□□□□ 0.39
TPM3P9-201ENST00000424846 RPAP2Q8IXW5 612 aaPredicted RBP17.48■□□□□ 0.39
TPM3P9-201ENST00000424846 MON2Q7Z3U7 1717 aa17.48■□□□□ 0.39
TPM3P9-201ENST00000424846 REREQ9P2R6 1566 aa17.48■□□□□ 0.39
TPM3P9-201ENST00000424846 NSFL1CQ9UNZ2 370 aaKnown RBP17.48■□□□□ 0.39
TPM3P9-201ENST00000424846 C3P01024 1663 aa17.47■□□□□ 0.39
TPM3P9-201ENST00000424846 PRPF40AO75400 957 aaKnown RBP17.47■□□□□ 0.39
TPM3P9-201ENST00000424846 ZSCAN23Q3MJ62 389 aa17.47■□□□□ 0.39
TPM3P9-201ENST00000424846 GPT2Q8TD30 523 aa17.47■□□□□ 0.39
TPM3P9-201ENST00000424846 EXOC6BQ9Y2D4 811 aa17.46■□□□□ 0.39
TPM3P9-201ENST00000424846 RBSNQ9H1K0 784 aa17.46■□□□□ 0.39
TPM3P9-201ENST00000424846 PPP1R9BQ96SB3 815 aa17.45■□□□□ 0.38
TPM3P9-201ENST00000424846 PTMSP20962 102 aa17.44■□□□□ 0.38
TPM3P9-201ENST00000424846 RIMS1Q86UR5 1692 aaKnown RBP17.44■□□□□ 0.38
TPM3P9-201ENST00000424846 TTC21BQ7Z4L5 1316 aa17.44■□□□□ 0.38
TPM3P9-201ENST00000424846 PRIM1P49642 420 aaKnown RBP17.44■□□□□ 0.38
TPM3P9-201ENST00000424846 NUCB2P80303 420 aa17.44■□□□□ 0.38
TPM3P9-201ENST00000424846 CYB5RLQ6IPT4 315 aa17.44■□□□□ 0.38
TPM3P9-201ENST00000424846 CRB1P82279 1406 aa17.44■□□□□ 0.38
TPM3P9-201ENST00000424846 PEAK1Q9H792 1746 aa17.44■□□□□ 0.38
TPM3P9-201ENST00000424846 PDE1AP54750 535 aa17.44■□□□□ 0.38
TPM3P9-201ENST00000424846 FAM69CQ0P6D2 419 aa17.43■□□□□ 0.38
TPM3P9-201ENST00000424846 CCDC173Q0VFZ6 552 aa17.43■□□□□ 0.38
TPM3P9-201ENST00000424846 NOL8Q76FK4 1167 aaKnown RBP17.43■□□□□ 0.38
TPM3P9-201ENST00000424846 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.43■□□□□ 0.38
TPM3P9-201ENST00000424846 PALD1Q9ULE6 856 aa17.43■□□□□ 0.38
TPM3P9-201ENST00000424846 ACEP12821 1306 aa17.43■□□□□ 0.38
TPM3P9-201ENST00000424846 AKAP12Q02952 1782 aa17.43■□□□□ 0.38
TPM3P9-201ENST00000424846 NECTIN2Q92692 538 aa17.43■□□□□ 0.38
TPM3P9-201ENST00000424846 ROBO2Q9HCK4 1378 aa17.42■□□□□ 0.38
TPM3P9-201ENST00000424846 SPATA31D1Q6ZQQ2 1576 aa17.42■□□□□ 0.38
TPM3P9-201ENST00000424846 MAP3K19Q56UN5 1328 aa17.42■□□□□ 0.38
TPM3P9-201ENST00000424846 ZNF445P59923 1031 aa17.42■□□□□ 0.38
TPM3P9-201ENST00000424846 TSPOAP1O95153 1857 aa17.42■□□□□ 0.38
TPM3P9-201ENST00000424846 MTHFSDQ2M296 383 aaKnown RBP17.42■□□□□ 0.38
TPM3P9-201ENST00000424846 NRKQ7Z2Y5 1582 aa17.42■□□□□ 0.38
TPM3P9-201ENST00000424846 PTPRCP08575 1304 aa17.42■□□□□ 0.38
TPM3P9-201ENST00000424846 ERC2O15083 957 aa17.41■□□□□ 0.38
TPM3P9-201ENST00000424846 KIAA0232Q92628 1395 aa17.41■□□□□ 0.38
TPM3P9-201ENST00000424846 IBTKQ9P2D0 1353 aaPredicted RBP17.41■□□□□ 0.38
TPM3P9-201ENST00000424846 ST18O60284 1047 aa17.41■□□□□ 0.38
TPM3P9-201ENST00000424846 TMEM63CQ9P1W3 806 aa17.41■□□□□ 0.38
TPM3P9-201ENST00000424846 NEK4P51957 841 aa17.41■□□□□ 0.38
TPM3P9-201ENST00000424846 ITSN1Q15811 1721 aa17.4■□□□□ 0.38
TPM3P9-201ENST00000424846 PNMA6EA0A0J9YXQ4 647 aa17.4■□□□□ 0.38
TPM3P9-201ENST00000424846 TSPYL4Q9UJ04 414 aa17.4■□□□□ 0.38
TPM3P9-201ENST00000424846 CASC1Q6TDU7 716 aa17.39■□□□□ 0.37
TPM3P9-201ENST00000424846 TMX3Q96JJ7 454 aa17.39■□□□□ 0.37
TPM3P9-201ENST00000424846 REC8O95072 547 aa17.39■□□□□ 0.37
TPM3P9-201ENST00000424846 OVOS2A0A0J9YW53 1432 aa17.39■□□□□ 0.37
TPM3P9-201ENST00000424846 OVOS2Q6IE36 1432 aa17.39■□□□□ 0.37
TPM3P9-201ENST00000424846 FOXD4L6Q3SYB3 417 aaPredicted RBP17.38■□□□□ 0.37
TPM3P9-201ENST00000424846 FOXD4L3Q6VB84 417 aaPredicted RBP17.38■□□□□ 0.37
TPM3P9-201ENST00000424846 ZSCAN30Q86W11 494 aa17.38■□□□□ 0.37
TPM3P9-201ENST00000424846 UNC5CLQ8IV45 518 aa17.38■□□□□ 0.37
TPM3P9-201ENST00000424846 IL25Q9H293 177 aa17.38■□□□□ 0.37
TPM3P9-201ENST00000424846 CWC22Q9HCG8 908 aaKnown RBP17.37■□□□□ 0.37
TPM3P9-201ENST00000424846 SALL3Q9BXA9 1300 aa17.37■□□□□ 0.37
TPM3P9-201ENST00000424846 SYCE3A1L190 88 aa17.37■□□□□ 0.37
TPM3P9-201ENST00000424846 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.37■□□□□ 0.37
TPM3P9-201ENST00000424846 HSP90AA2PQ14568 343 aaPredicted RBP17.37■□□□□ 0.37
TPM3P9-201ENST00000424846 KIAA1211Q6ZU35 1233 aa17.37■□□□□ 0.37
TPM3P9-201ENST00000424846 OSBPL3Q9H4L5 887 aa17.37■□□□□ 0.37
TPM3P9-201ENST00000424846 ESYT1Q9BSJ8 1104 aa17.36■□□□□ 0.37
TPM3P9-201ENST00000424846 RGPD1P0DJD0 1748 aa17.36■□□□□ 0.37
TPM3P9-201ENST00000424846 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.36■□□□□ 0.37
TPM3P9-201ENST00000424846 RILPL2Q969X0 211 aa17.35■□□□□ 0.37
TPM3P9-201ENST00000424846 UPF3BQ9BZI7 483 aaKnown RBP17.35■□□□□ 0.37
TPM3P9-201ENST00000424846 HMMRO75330 724 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms