RNA–Protein interactions for RNA: ENST00000424833.5

SCN2A-204, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 1 (best)

Gene SCN2A, Length 1,807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-204ENST00000424833 HOXC9P31274 260 aa10.57□□□□□ -0.72
SCN2A-204ENST00000424833 TWISTNBQ3B726 338 aaPredicted RBP10.57□□□□□ -0.72
SCN2A-204ENST00000424833 MCM10Q7L590 875 aa10.57□□□□□ -0.72
SCN2A-204ENST00000424833 DDX19BQ9UMR2 479 aa10.57□□□□□ -0.72
SCN2A-204ENST00000424833 PHF8Q9UPP1 1060 aa10.57□□□□□ -0.72
SCN2A-204ENST00000424833 KIF24Q5T7B8 1368 aa10.57□□□□□ -0.72
SCN2A-204ENST00000424833 CHL1O00533 1208 aa10.56□□□□□ -0.72
SCN2A-204ENST00000424833 KRT24Q2M2I5 525 aa10.56□□□□□ -0.72
SCN2A-204ENST00000424833 PDZRN3Q9UPQ7 1066 aa10.56□□□□□ -0.72
SCN2A-204ENST00000424833 ABCC4O15439 1325 aa10.56□□□□□ -0.72
SCN2A-204ENST00000424833 RGS12O14924 1447 aa10.56□□□□□ -0.72
SCN2A-204ENST00000424833 AMPHP49418 695 aa10.56□□□□□ -0.72
SCN2A-204ENST00000424833 HDAC1Q13547 482 aaPredicted RBP10.56□□□□□ -0.72
SCN2A-204ENST00000424833 MTHFSDQ2M296 383 aaKnown RBP10.56□□□□□ -0.72
SCN2A-204ENST00000424833 PHRF1Q9P1Y6 1649 aaKnown RBP10.55□□□□□ -0.72
SCN2A-204ENST00000424833 IPO8O15397 1037 aaKnown RBP10.55□□□□□ -0.72
SCN2A-204ENST00000424833 ABTB2Q8N961 1025 aa10.55□□□□□ -0.72
SCN2A-204ENST00000424833 ARHGAP45Q92619 1136 aa10.55□□□□□ -0.72
SCN2A-204ENST00000424833 RWDD1Q9H446 243 aaPredicted RBP10.55□□□□□ -0.72
SCN2A-204ENST00000424833 TRPM3Q9HCF6 1732 aaPredicted RBP10.54□□□□□ -0.72
SCN2A-204ENST00000424833 DNAJC5Q9H3Z4 198 aa10.54□□□□□ -0.72
SCN2A-204ENST00000424833 RTL1A6NKG5 1358 aa10.54□□□□□ -0.72
SCN2A-204ENST00000424833 KIAA0232Q92628 1395 aa10.54□□□□□ -0.72
SCN2A-204ENST00000424833 USP19O94966 1318 aa10.53□□□□□ -0.72
SCN2A-204ENST00000424833 STRCP1A6NGW2 1772 aa10.53□□□□□ -0.72
SCN2A-204ENST00000424833 ZBTB7BO15156 539 aaPredicted RBP10.53□□□□□ -0.72
SCN2A-204ENST00000424833 SMC5Q8IY18 1101 aa10.53□□□□□ -0.72
SCN2A-204ENST00000424833 MSH6P52701 1360 aa10.53□□□□□ -0.72
SCN2A-204ENST00000424833 SEC24BO95487 1268 aa10.52□□□□□ -0.73
SCN2A-204ENST00000424833 ESCO1Q5FWF5 840 aa10.52□□□□□ -0.73
SCN2A-204ENST00000424833 ORAI2Q96SN7 254 aa10.52□□□□□ -0.73
SCN2A-204ENST00000424833 SLIT3O75094 1523 aa10.52□□□□□ -0.73
SCN2A-204ENST00000424833 RGPD2P0DJD1 1756 aa10.52□□□□□ -0.73
SCN2A-204ENST00000424833 MIS18AQ9NYP9 233 aa10.51□□□□□ -0.73
SCN2A-204ENST00000424833 ZBTB47Q9UFB7 747 aaPredicted RBP10.51□□□□□ -0.73
SCN2A-204ENST00000424833 FAM208AQ9UK61 1670 aaKnown RBP10.5□□□□□ -0.73
SCN2A-204ENST00000424833 SIRT2Q8IXJ6 389 aa10.5□□□□□ -0.73
SCN2A-204ENST00000424833 C1orf167Q5SNV9 1468 aa10.5□□□□□ -0.73
SCN2A-204ENST00000424833 XPCQ01831 940 aaPredicted RBP10.49□□□□□ -0.73
SCN2A-204ENST00000424833 USHBP1Q8N6Y0 703 aa10.49□□□□□ -0.73
SCN2A-204ENST00000424833 IP6K1Q92551 441 aa10.49□□□□□ -0.73
SCN2A-204ENST00000424833 LTV1Q96GA3 475 aaPredicted RBP10.49□□□□□ -0.73
SCN2A-204ENST00000424833 C1orf115Q9H7X2 142 aa10.49□□□□□ -0.73
SCN2A-204ENST00000424833 KIF1AQ12756 1690 aa10.49□□□□□ -0.73
SCN2A-204ENST00000424833 MED1Q15648 1581 aaPredicted RBP10.49□□□□□ -0.73
SCN2A-204ENST00000424833 ALS2Q96Q42 1657 aa10.49□□□□□ -0.73
SCN2A-204ENST00000424833 CAMTA1Q9Y6Y1 1673 aa10.49□□□□□ -0.73
SCN2A-204ENST00000424833 GAS2L2Q8NHY3 880 aa10.49□□□□□ -0.73
SCN2A-204ENST00000424833 API5Q9BZZ5 524 aaKnown RBP10.49□□□□□ -0.73
SCN2A-204ENST00000424833 NCAPD2Q15021 1401 aa10.48□□□□□ -0.73
SCN2A-204ENST00000424833 MAP3K5Q99683 1374 aa10.48□□□□□ -0.73
SCN2A-204ENST00000424833 PSME1Q06323 249 aa10.48□□□□□ -0.73
SCN2A-204ENST00000424833 NBPF6Q5VWK0 638 aa10.48□□□□□ -0.73
SCN2A-204ENST00000424833 NBPF4Q96M43 638 aa10.48□□□□□ -0.73
SCN2A-204ENST00000424833 MST1RQ04912 1400 aa10.48□□□□□ -0.73
SCN2A-204ENST00000424833 ATP10DQ9P241 1426 aa10.48□□□□□ -0.73
SCN2A-204ENST00000424833 HTATSF1O43719 755 aaKnown RBP10.47□□□□□ -0.73
SCN2A-204ENST00000424833 NUCB1Q02818 461 aa10.47□□□□□ -0.73
SCN2A-204ENST00000424833 INTS3Q68E01 1043 aaKnown RBP10.47□□□□□ -0.73
SCN2A-204ENST00000424833 IL17REQ8NFR9 667 aa10.47□□□□□ -0.73
SCN2A-204ENST00000424833 LMO7Q8WWI1 1683 aa10.47□□□□□ -0.73
SCN2A-204ENST00000424833 GNAT3A8MTJ3 354 aa10.47□□□□□ -0.73
SCN2A-204ENST00000424833 TSPYL4Q9UJ04 414 aa10.47□□□□□ -0.73
SCN2A-204ENST00000424833 PDIA4P13667 645 aaKnown RBP10.46□□□□□ -0.74
SCN2A-204ENST00000424833 G2E3Q7L622 706 aa10.46□□□□□ -0.74
SCN2A-204ENST00000424833 PROSER2Q86WR7 435 aaPredicted RBP10.46□□□□□ -0.74
SCN2A-204ENST00000424833 RTF1Q92541 710 aaKnown RBP10.46□□□□□ -0.74
SCN2A-204ENST00000424833 CEMIPQ8WUJ3 1361 aa10.46□□□□□ -0.74
SCN2A-204ENST00000424833 PXDNQ92626 1479 aa10.45□□□□□ -0.74
SCN2A-204ENST00000424833 GCP02774 474 aa10.45□□□□□ -0.74
SCN2A-204ENST00000424833 SLC4A3P48751 1232 aa10.45□□□□□ -0.74
SCN2A-204ENST00000424833 ARHGEF25Q86VW2 580 aa10.45□□□□□ -0.74
SCN2A-204ENST00000424833 KCNH5Q8NCM2 988 aa10.45□□□□□ -0.74
SCN2A-204ENST00000424833 LRRC59Q96AG4 307 aaKnown RBP10.45□□□□□ -0.74
SCN2A-204ENST00000424833 DDRGK1Q96HY6 314 aa10.45□□□□□ -0.74
SCN2A-204ENST00000424833 KDM3BQ7LBC6 1761 aa10.45□□□□□ -0.74
SCN2A-204ENST00000424833 PTPRCP08575 1304 aa10.45□□□□□ -0.74
SCN2A-204ENST00000424833 RGPD5Q99666 1765 aa10.44□□□□□ -0.74
SCN2A-204ENST00000424833 TMEM94Q12767 1356 aa10.44□□□□□ -0.74
SCN2A-204ENST00000424833 N4BP2Q86UW6 1770 aaPredicted RBP10.44□□□□□ -0.74
SCN2A-204ENST00000424833 SLC4A2P04920 1241 aa10.44□□□□□ -0.74
SCN2A-204ENST00000424833 CHD1LQ86WJ1 897 aa10.44□□□□□ -0.74
SCN2A-204ENST00000424833 LNPKQ9C0E8 428 aa10.44□□□□□ -0.74
SCN2A-204ENST00000424833 C19orf44Q9H6X5 657 aa10.44□□□□□ -0.74
SCN2A-204ENST00000424833 KRT28Q7Z3Y7 464 aa10.43□□□□□ -0.74
SCN2A-204ENST00000424833 AXIN2Q9Y2T1 843 aa10.43□□□□□ -0.74
SCN2A-204ENST00000424833 XIRP1Q702N8 1843 aaKnown RBP10.43□□□□□ -0.74
SCN2A-204ENST00000424833 DCCP43146 1447 aa10.43□□□□□ -0.74
SCN2A-204ENST00000424833 CRYBG1Q9Y4K1 1723 aa10.43□□□□□ -0.74
SCN2A-204ENST00000424833 PPP4R3CPQ6ZMV5 832 aa10.42□□□□□ -0.74
SCN2A-204ENST00000424833 TBC1D32Q96NH3 1257 aa10.42□□□□□ -0.74
SCN2A-204ENST00000424833 CHMP4BQ9H444 224 aaKnown RBP10.42□□□□□ -0.74
SCN2A-204ENST00000424833 ZBTB7CA1YPR0 619 aa10.42□□□□□ -0.74
SCN2A-204ENST00000424833 F6X3S4 739 aa10.42□□□□□ -0.74
SCN2A-204ENST00000424833 DDX17Q92841 729 aaKnown RBP10.42□□□□□ -0.74
SCN2A-204ENST00000424833 GCC1Q96CN9 775 aa10.42□□□□□ -0.74
SCN2A-204ENST00000424833 MEIS3Q99687 375 aa10.42□□□□□ -0.74
SCN2A-204ENST00000424833 LGR6Q9HBX8 967 aa10.42□□□□□ -0.74
SCN2A-204ENST00000424833 COL18A1P39060 1754 aa10.41□□□□□ -0.74
SCN2A-204ENST00000424833 ADAMTS7Q9UKP4 1686 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms