RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 KCNH4Q9UQ05 1017 aa4.45□□□□□ -1.7
TOP2A-201ENST00000423485 TACC2O95359 2948 aa4.45□□□□□ -1.7
TOP2A-201ENST00000423485 SLC4A3P48751 1232 aa4.45□□□□□ -1.7
TOP2A-201ENST00000423485 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.45□□□□□ -1.7
TOP2A-201ENST00000423485 AMOTL2Q9Y2J4 779 aa4.45□□□□□ -1.7
TOP2A-201ENST00000423485 KIAA0556O60303 1618 aa4.45□□□□□ -1.7
TOP2A-201ENST00000423485 DEPDC5O75140 1603 aa4.45□□□□□ -1.7
TOP2A-201ENST00000423485 DCHS2Q6V1P9 2916 aa4.45□□□□□ -1.7
TOP2A-201ENST00000423485 CHMP4BP1P59074 171 aa4.45□□□□□ -1.7
TOP2A-201ENST00000423485 DGKZQ13574 1117 aa4.45□□□□□ -1.7
TOP2A-201ENST00000423485 PRKG1Q13976 671 aa4.45□□□□□ -1.7
TOP2A-201ENST00000423485 STK31Q9BXU1 1019 aa4.45□□□□□ -1.7
TOP2A-201ENST00000423485 NSD3Q9BZ95 1437 aa4.45□□□□□ -1.7
TOP2A-201ENST00000423485 EPRSP07814 1512 aaKnown RBP4.45□□□□□ -1.7
TOP2A-201ENST00000423485 GPATCH8Q9UKJ3 1502 aaKnown RBP4.45□□□□□ -1.7
TOP2A-201ENST00000423485 ASXL2Q76L83 1435 aa4.45□□□□□ -1.7
TOP2A-201ENST00000423485 CASKIN1Q8WXD9 1431 aa4.45□□□□□ -1.7
TOP2A-201ENST00000423485 DDX58O95786 925 aaKnown RBP4.45□□□□□ -1.7
TOP2A-201ENST00000423485 SSTR3P32745 418 aaPredicted RBP4.45□□□□□ -1.7
TOP2A-201ENST00000423485 LARGE2Q8N3Y3 721 aa4.45□□□□□ -1.7
TOP2A-201ENST00000423485 GTF3C3Q9Y5Q9 886 aa4.45□□□□□ -1.7
TOP2A-201ENST00000423485 NCOA1Q15788 1441 aa4.44□□□□□ -1.7
TOP2A-201ENST00000423485 FGD6Q6ZV73 1430 aa4.44□□□□□ -1.7
TOP2A-201ENST00000423485 USP47Q96K76 1375 aa4.44□□□□□ -1.7
TOP2A-201ENST00000423485 KIF28PB7ZC32 967 aa4.44□□□□□ -1.7
TOP2A-201ENST00000423485 CA12O43570 354 aa4.44□□□□□ -1.7
TOP2A-201ENST00000423485 SRGAP2BP0DMP2 458 aa4.44□□□□□ -1.7
TOP2A-201ENST00000423485 PABPC4Q13310 644 aaKnown RBP eCLIP4.44□□□□□ -1.71e-13■■■■□ 19.7
TOP2A-201ENST00000423485 MICALL1Q8N3F8 863 aa4.44□□□□□ -1.7
TOP2A-201ENST00000423485 ASXL1Q8IXJ9 1541 aa4.44□□□□□ -1.7
TOP2A-201ENST00000423485 C6orf229H3BNL8 230 aa4.44□□□□□ -1.7
TOP2A-201ENST00000423485 FOXO3O43524 673 aa4.44□□□□□ -1.7
TOP2A-201ENST00000423485 SREBF2Q12772 1141 aa4.44□□□□□ -1.7
TOP2A-201ENST00000423485 TCP11L2Q8N4U5 519 aa4.44□□□□□ -1.7
TOP2A-201ENST00000423485 MBIPQ9NS73 344 aa4.44□□□□□ -1.7
TOP2A-201ENST00000423485 BTG4Q9NY30 223 aa4.44□□□□□ -1.7
TOP2A-201ENST00000423485 ABCC2Q92887 1545 aa4.44□□□□□ -1.7
TOP2A-201ENST00000423485 ZNF335Q9H4Z2 1342 aaPredicted RBP4.44□□□□□ -1.7
TOP2A-201ENST00000423485 TRIM21P19474 475 aaKnown RBP4.44□□□□□ -1.7
TOP2A-201ENST00000423485 DNAI2Q9GZS0 605 aa4.44□□□□□ -1.7
TOP2A-201ENST00000423485 NUP160Q12769 1436 aa4.44□□□□□ -1.7
TOP2A-201ENST00000423485 IQGAP1P46940 1657 aa4.44□□□□□ -1.7
TOP2A-201ENST00000423485 ZCCHC11Q5TAX3 1644 aaKnown RBP4.44□□□□□ -1.7
TOP2A-201ENST00000423485 SLC4A2P04920 1241 aa4.44□□□□□ -1.7
TOP2A-201ENST00000423485 ACSBG1Q96GR2 724 aa4.44□□□□□ -1.7
TOP2A-201ENST00000423485 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.44□□□□□ -1.71e-6■■■■□ 25.4
TOP2A-201ENST00000423485 PIM2Q9P1W9 311 aa4.44□□□□□ -1.7
TOP2A-201ENST00000423485 KNDC1Q76NI1 1749 aa4.44□□□□□ -1.7
TOP2A-201ENST00000423485 ZC3H13Q5T200 1668 aaKnown RBP4.44□□□□□ -1.7
TOP2A-201ENST00000423485 ECM2O94769 699 aaPredicted RBP4.44□□□□□ -1.7
TOP2A-201ENST00000423485 TNIP1Q15025 636 aa4.44□□□□□ -1.7
TOP2A-201ENST00000423485 AAK1Q2M2I8 961 aa4.44□□□□□ -1.7
TOP2A-201ENST00000423485 NUTM1Q86Y26 1132 aa4.44□□□□□ -1.7
TOP2A-201ENST00000423485 SLF2Q8IX21 1173 aa4.44□□□□□ -1.7
TOP2A-201ENST00000423485 GPHNQ9NQX3 736 aaPredicted RBP4.44□□□□□ -1.7
TOP2A-201ENST00000423485 SUPT16HQ9Y5B9 1047 aaKnown RBP4.44□□□□□ -1.7
TOP2A-201ENST00000423485 KIF15Q9NS87 1388 aa4.43□□□□□ -1.7
TOP2A-201ENST00000423485 EVC2Q86UK5 1308 aa4.43□□□□□ -1.7
TOP2A-201ENST00000423485 NGEFQ8N5V2 710 aa4.43□□□□□ -1.7
TOP2A-201ENST00000423485 SLC16A10Q8TF71 515 aa4.43□□□□□ -1.7
TOP2A-201ENST00000423485 CHMP4BQ9H444 224 aaKnown RBP4.43□□□□□ -1.7
TOP2A-201ENST00000423485 RNF216Q9NWF9 866 aaPredicted RBP4.43□□□□□ -1.7
TOP2A-201ENST00000423485 TIMELESSQ9UNS1 1208 aa4.43□□□□□ -1.7
TOP2A-201ENST00000423485 CSADQ9Y600 493 aa4.43□□□□□ -1.7
TOP2A-201ENST00000423485 VIRMAQ69YN4 1812 aaKnown RBP4.43□□□□□ -1.7
TOP2A-201ENST00000423485 DHX16O60231 1041 aaKnown RBP4.43□□□□□ -1.7
TOP2A-201ENST00000423485 PNMA8AQ86V59 439 aaPredicted RBP4.43□□□□□ -1.7
TOP2A-201ENST00000423485 NLGN1Q8N2Q7 840 aa4.43□□□□□ -1.7
TOP2A-201ENST00000423485 KIDINS220Q9ULH0 1771 aa4.43□□□□□ -1.7
TOP2A-201ENST00000423485 MAP3K13O43283 966 aa4.43□□□□□ -1.7
TOP2A-201ENST00000423485 ANKIB1Q9P2G1 1089 aa4.43□□□□□ -1.7
TOP2A-201ENST00000423485 NOM1Q5C9Z4 860 aaKnown RBP4.43□□□□□ -1.7
TOP2A-201ENST00000423485 C9orf131Q5VYM1 1079 aa4.43□□□□□ -1.7
TOP2A-201ENST00000423485 CNKSR1Q969H4 720 aa4.43□□□□□ -1.7
TOP2A-201ENST00000423485 ZBED2Q9BTP6 218 aa4.43□□□□□ -1.7
TOP2A-201ENST00000423485 TEX13AQ9BXU3 409 aaPredicted RBP4.43□□□□□ -1.7
TOP2A-201ENST00000423485 DCDC2CA8MYV0 355 aa4.42□□□□□ -1.7
TOP2A-201ENST00000423485 WASLO00401 505 aaPredicted RBP4.42□□□□□ -1.7
TOP2A-201ENST00000423485 EIF5P55010 431 aaKnown RBP4.42□□□□□ -1.7
TOP2A-201ENST00000423485 LMOD3Q0VAK6 560 aa4.42□□□□□ -1.7
TOP2A-201ENST00000423485 NAA30Q147X3 362 aaPredicted RBP4.42□□□□□ -1.7
TOP2A-201ENST00000423485 ATF7IPQ6VMQ6 1270 aa4.42□□□□□ -1.7
TOP2A-201ENST00000423485 MORC1Q86VD1 984 aa4.42□□□□□ -1.7
TOP2A-201ENST00000423485 FGD1P98174 961 aa4.42□□□□□ -1.7
TOP2A-201ENST00000423485 LRRFIP1Q32MZ4 808 aaKnown RBP4.42□□□□□ -1.7
TOP2A-201ENST00000423485 SPOUT1Q5T280 376 aaKnown RBP4.42□□□□□ -1.7
TOP2A-201ENST00000423485 DDX46Q7L014 1031 aaKnown RBP4.42□□□□□ -1.7
TOP2A-201ENST00000423485 RAET1EQ8TD07 263 aa4.42□□□□□ -1.7
TOP2A-201ENST00000423485 YTHDC1Q96MU7 727 aaKnown RBP4.42□□□□□ -1.7
TOP2A-201ENST00000423485 TESK2Q96S53 571 aa4.42□□□□□ -1.7
TOP2A-201ENST00000423485 SETDB2Q96T68 719 aa4.42□□□□□ -1.7
TOP2A-201ENST00000423485 ZMYND15Q9H091 742 aa4.42□□□□□ -1.7
TOP2A-201ENST00000423485 ATP10BO94823 1461 aa4.42□□□□□ -1.7
TOP2A-201ENST00000423485 PPP1R12BO60237 982 aaPredicted RBP4.42□□□□□ -1.7
TOP2A-201ENST00000423485 SCLT1Q96NL6 688 aa4.42□□□□□ -1.7
TOP2A-201ENST00000423485 SPINK5Q9NQ38 1064 aaPredicted RBP4.42□□□□□ -1.7
TOP2A-201ENST00000423485 TONSLQ96HA7 1378 aa4.42□□□□□ -1.7
TOP2A-201ENST00000423485 UGGT1Q9NYU2 1555 aa4.42□□□□□ -1.7
TOP2A-201ENST00000423485 TRAPPC8Q9Y2L5 1435 aa4.42□□□□□ -1.7
TOP2A-201ENST00000423485 VPS13CQ709C8 3753 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms