RNA–Protein interactions for RNA: ENST00000423026.6

SNX20-203, Transcript of sorting nexin 20, humanhuman

TSL 1 (best) BASIC

Gene SNX20, Length 2,156 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-203ENST00000423026 TMEM94Q12767 1356 aa11.49□□□□□ -0.57
SNX20-203ENST00000423026 CHL1O00533 1208 aa11.48□□□□□ -0.57
SNX20-203ENST00000423026 IGHDP01880 384 aa11.48□□□□□ -0.57
SNX20-203ENST00000423026 NBR1Q14596 966 aa11.48□□□□□ -0.57
SNX20-203ENST00000423026 TSPYL6Q8N831 410 aa11.48□□□□□ -0.57
SNX20-203ENST00000423026 ARHGAP45Q92619 1136 aa11.48□□□□□ -0.57
SNX20-203ENST00000423026 CHMP4BQ9H444 224 aaKnown RBP11.48□□□□□ -0.57
SNX20-203ENST00000423026 NFAT5O94916 1531 aa11.48□□□□□ -0.57
SNX20-203ENST00000423026 ZBTB7CA1YPR0 619 aa11.48□□□□□ -0.57
SNX20-203ENST00000423026 PDE4AP27815 886 aa11.48□□□□□ -0.57
SNX20-203ENST00000423026 HSPA2P54652 639 aa11.48□□□□□ -0.57
SNX20-203ENST00000423026 XPCQ01831 940 aaPredicted RBP11.48□□□□□ -0.57
SNX20-203ENST00000423026 MRPL50Q8N5N7 158 aaKnown RBP11.48□□□□□ -0.57
SNX20-203ENST00000423026 C8orf58Q8NAV2 365 aa11.48□□□□□ -0.57
SNX20-203ENST00000423026 DCCP43146 1447 aa11.48□□□□□ -0.57
SNX20-203ENST00000423026 GCP02774 474 aa11.47□□□□□ -0.57
SNX20-203ENST00000423026 CADPS2Q86UW7 1296 aa11.47□□□□□ -0.57
SNX20-203ENST00000423026 GNAT3A8MTJ3 354 aa11.46□□□□□ -0.57
SNX20-203ENST00000423026 TMEM57Q8N5G2 664 aa11.46□□□□□ -0.57
SNX20-203ENST00000423026 BACH2Q9BYV9 841 aa11.46□□□□□ -0.57
SNX20-203ENST00000423026 PCDHB15Q9Y5E8 787 aa11.46□□□□□ -0.57
SNX20-203ENST00000423026 KIAA0232Q92628 1395 aa11.46□□□□□ -0.58
SNX20-203ENST00000423026 STRCP1A6NGW2 1772 aa11.45□□□□□ -0.58
SNX20-203ENST00000423026 PHRF1Q9P1Y6 1649 aaKnown RBP11.45□□□□□ -0.58
SNX20-203ENST00000423026 CRB1P82279 1406 aa11.45□□□□□ -0.58
SNX20-203ENST00000423026 RGS3P49796 1198 aa11.45□□□□□ -0.58
SNX20-203ENST00000423026 API5Q9BZZ5 524 aaKnown RBP11.45□□□□□ -0.58
SNX20-203ENST00000423026 TSPYL4Q9UJ04 414 aa11.45□□□□□ -0.58
SNX20-203ENST00000423026 MSH6P52701 1360 aa11.45□□□□□ -0.58
SNX20-203ENST00000423026 TRPM3Q9HCF6 1732 aaPredicted RBP11.45□□□□□ -0.58
SNX20-203ENST00000423026 MST1RQ04912 1400 aa11.44□□□□□ -0.58
SNX20-203ENST00000423026 SLIT3O75094 1523 aa11.44□□□□□ -0.58
SNX20-203ENST00000423026 ARHGEF25Q86VW2 580 aa11.44□□□□□ -0.58
SNX20-203ENST00000423026 SKAP1Q86WV1 359 aa11.44□□□□□ -0.58
SNX20-203ENST00000423026 ZBTB47Q9UFB7 747 aaPredicted RBP11.44□□□□□ -0.58
SNX20-203ENST00000423026 USP19O94966 1318 aa11.44□□□□□ -0.58
SNX20-203ENST00000423026 PLEKHG5O94827 1062 aa11.44□□□□□ -0.58
SNX20-203ENST00000423026 MAP3K5Q99683 1374 aa11.43□□□□□ -0.58
SNX20-203ENST00000423026 USP35Q9P2H5 1018 aa11.43□□□□□ -0.58
SNX20-203ENST00000423026 NPHP3Q7Z494 1330 aa11.43□□□□□ -0.58
SNX20-203ENST00000423026 NBPF6Q5VWK0 638 aa11.43□□□□□ -0.58
SNX20-203ENST00000423026 USHBP1Q8N6Y0 703 aa11.43□□□□□ -0.58
SNX20-203ENST00000423026 NBPF4Q96M43 638 aa11.43□□□□□ -0.58
SNX20-203ENST00000423026 ZBTB40Q9NUA8 1239 aa11.43□□□□□ -0.58
SNX20-203ENST00000423026 HDAC1Q13547 482 aaPredicted RBP11.42□□□□□ -0.58
SNX20-203ENST00000423026 BABAM1Q9NWV8 329 aa11.42□□□□□ -0.58
SNX20-203ENST00000423026 FAM161AQ3B820 660 aa11.41□□□□□ -0.58
SNX20-203ENST00000423026 PLEKHO1Q53GL0 409 aaPredicted RBP11.41□□□□□ -0.58
SNX20-203ENST00000423026 MIS18AQ9NYP9 233 aa11.41□□□□□ -0.58
SNX20-203ENST00000423026 ABCC4O15439 1325 aa11.41□□□□□ -0.58
SNX20-203ENST00000423026 ALS2Q96Q42 1657 aa11.41□□□□□ -0.58
SNX20-203ENST00000423026 TAF7Q15545 349 aaPredicted RBP11.4□□□□□ -0.58
SNX20-203ENST00000423026 KRT24Q2M2I5 525 aa11.4□□□□□ -0.58
SNX20-203ENST00000423026 AMOTQ4VCS5 1084 aa11.4□□□□□ -0.58
SNX20-203ENST00000423026 ANKRD24Q8TF21 1146 aa11.4□□□□□ -0.58
SNX20-203ENST00000423026 LMTK3Q96Q04 1460 aa11.4□□□□□ -0.58
SNX20-203ENST00000423026 ZBTB7BO15156 539 aaPredicted RBP11.4□□□□□ -0.59
SNX20-203ENST00000423026 IL17REQ8NFR9 667 aa11.4□□□□□ -0.59
SNX20-203ENST00000423026 PTPRCP08575 1304 aa11.39□□□□□ -0.59
SNX20-203ENST00000423026 RGPD2P0DJD1 1756 aa11.39□□□□□ -0.59
SNX20-203ENST00000423026 LRRC59Q96AG4 307 aaKnown RBP11.39□□□□□ -0.59
SNX20-203ENST00000423026 PDZRN3Q9UPQ7 1066 aa11.39□□□□□ -0.59
SNX20-203ENST00000423026 SOS1Q07889 1333 aaPredicted RBP11.39□□□□□ -0.59
SNX20-203ENST00000423026 STRCQ7RTU9 1775 aa11.39□□□□□ -0.59
SNX20-203ENST00000423026 ZC3H6P61129 1189 aaKnown RBP11.38□□□□□ -0.59
SNX20-203ENST00000423026 LRRC37A3O60309 1634 aa11.38□□□□□ -0.59
SNX20-203ENST00000423026 SLC4A2P04920 1241 aa11.38□□□□□ -0.59
SNX20-203ENST00000423026 AKAP4Q5JQC9 854 aa11.38□□□□□ -0.59
SNX20-203ENST00000423026 STK31Q9BXU1 1019 aa11.38□□□□□ -0.59
SNX20-203ENST00000423026 C1orf141Q5JVX7 400 aa11.37□□□□□ -0.59
SNX20-203ENST00000423026 ZNF530Q6P9A1 599 aaPredicted RBP11.37□□□□□ -0.59
SNX20-203ENST00000423026 NPM2Q86SE8 214 aaKnown RBP11.37□□□□□ -0.59
SNX20-203ENST00000423026 IL27Q8NEV9 243 aa11.37□□□□□ -0.59
SNX20-203ENST00000423026 DDX17Q92841 729 aaKnown RBP11.37□□□□□ -0.59
SNX20-203ENST00000423026 TNS3Q68CZ2 1445 aa11.37□□□□□ -0.59
SNX20-203ENST00000423026 CCDC30Q5VVM6 783 aa11.37□□□□□ -0.59
SNX20-203ENST00000423026 CHMP4AQ9BY43 222 aa11.37□□□□□ -0.59
SNX20-203ENST00000423026 XIRP1Q702N8 1843 aaKnown RBP11.36□□□□□ -0.59
SNX20-203ENST00000423026 CACNA1FO60840 1977 aa11.36□□□□□ -0.59
SNX20-203ENST00000423026 MED1Q15648 1581 aaPredicted RBP11.36□□□□□ -0.59
SNX20-203ENST00000423026 INTS3Q68E01 1043 aaKnown RBP11.36□□□□□ -0.59
SNX20-203ENST00000423026 AXIN2Q9Y2T1 843 aa11.36□□□□□ -0.59
SNX20-203ENST00000423026 RGPD5Q99666 1765 aa11.36□□□□□ -0.59
SNX20-203ENST00000423026 NCAPD2Q15021 1401 aa11.36□□□□□ -0.59
SNX20-203ENST00000423026 SPATA31A3Q5VYP0 1347 aa11.36□□□□□ -0.59
SNX20-203ENST00000423026 TEFQ10587 303 aa11.35□□□□□ -0.59
SNX20-203ENST00000423026 C8orf34Q49A92 452 aa11.35□□□□□ -0.59
SNX20-203ENST00000423026 SMC5Q8IY18 1101 aa11.35□□□□□ -0.59
SNX20-203ENST00000423026 CEMIPQ8WUJ3 1361 aa11.35□□□□□ -0.59
SNX20-203ENST00000423026 ERBB3P21860 1342 aa11.35□□□□□ -0.59
SNX20-203ENST00000423026 BRINP3Q76B58 766 aa11.34□□□□□ -0.59
SNX20-203ENST00000423026 GCC1Q96CN9 775 aa11.34□□□□□ -0.59
SNX20-203ENST00000423026 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.34□□□□□ -0.59
SNX20-203ENST00000423026 LMO7Q8WWI1 1683 aa11.34□□□□□ -0.59
SNX20-203ENST00000423026 PXDNQ92626 1479 aa11.34□□□□□ -0.59
SNX20-203ENST00000423026 ZNF335Q9H4Z2 1342 aaPredicted RBP11.34□□□□□ -0.59
SNX20-203ENST00000423026 RAPGEF4Q8WZA2 1011 aa11.34□□□□□ -0.59
SNX20-203ENST00000423026 NLRP2Q9NX02 1062 aa11.34□□□□□ -0.59
SNX20-203ENST00000423026 SLAIN2Q9P270 581 aa11.34□□□□□ -0.59
SNX20-203ENST00000423026 CAMTA1Q9Y6Y1 1673 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms