RNA–Protein interactions for RNA: ENST00000422785.7

CDCA3-202, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 2,760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-202ENST00000422785 SEC24BO95487 1268 aa17.41■□□□□ 0.38
CDCA3-202ENST00000422785 RTL1A6NKG5 1358 aa17.4■□□□□ 0.38
CDCA3-202ENST00000422785 HTATSF1O43719 755 aaKnown RBP17.4■□□□□ 0.38
CDCA3-202ENST00000422785 NWD1Q149M9 1564 aa17.4■□□□□ 0.38
CDCA3-202ENST00000422785 NUCB1Q02818 461 aa17.4■□□□□ 0.38
CDCA3-202ENST00000422785 NBR1Q14596 966 aa17.39■□□□□ 0.37
CDCA3-202ENST00000422785 KRT24Q2M2I5 525 aa17.39■□□□□ 0.37
CDCA3-202ENST00000422785 RBM33Q96EV2 1170 aaKnown RBP17.39■□□□□ 0.37
CDCA3-202ENST00000422785 DAXXQ9UER7 740 aaPredicted RBP17.39■□□□□ 0.37
CDCA3-202ENST00000422785 C14orf37Q86TY3 774 aa17.38■□□□□ 0.37
CDCA3-202ENST00000422785 ESCO1Q5FWF5 840 aa17.37■□□□□ 0.37
CDCA3-202ENST00000422785 GCC1Q96CN9 775 aa17.37■□□□□ 0.37
CDCA3-202ENST00000422785 INTS3Q68E01 1043 aaKnown RBP17.37■□□□□ 0.37
CDCA3-202ENST00000422785 PSME1Q06323 249 aa17.36■□□□□ 0.37
CDCA3-202ENST00000422785 UPF2Q9HAU5 1272 aaKnown RBP17.36■□□□□ 0.37
CDCA3-202ENST00000422785 ANO8Q9HCE9 1232 aaPredicted RBP17.36■□□□□ 0.37
CDCA3-202ENST00000422785 TSPYL4Q9UJ04 414 aa17.36■□□□□ 0.37
CDCA3-202ENST00000422785 PTPRCP08575 1304 aa17.36■□□□□ 0.37
CDCA3-202ENST00000422785 LTN1O94822 1766 aa17.36■□□□□ 0.37
CDCA3-202ENST00000422785 RGS12O14924 1447 aa17.36■□□□□ 0.37
CDCA3-202ENST00000422785 NFAT5O94916 1531 aa17.36■□□□□ 0.37
CDCA3-202ENST00000422785 LRRC37A3O60309 1634 aa17.35■□□□□ 0.37
CDCA3-202ENST00000422785 CHD1LQ86WJ1 897 aa17.35■□□□□ 0.37
CDCA3-202ENST00000422785 C1orf115Q9H7X2 142 aa17.35■□□□□ 0.37
CDCA3-202ENST00000422785 MIS18AQ9NYP9 233 aa17.35■□□□□ 0.37
CDCA3-202ENST00000422785 GNAT3A8MTJ3 354 aa17.34■□□□□ 0.37
CDCA3-202ENST00000422785 IP6K1Q92551 441 aa17.34■□□□□ 0.37
CDCA3-202ENST00000422785 SLC4A3P48751 1232 aa17.34■□□□□ 0.37
CDCA3-202ENST00000422785 SIRT2Q8IXJ6 389 aa17.34■□□□□ 0.37
CDCA3-202ENST00000422785 KCNH5Q8NCM2 988 aa17.34■□□□□ 0.37
CDCA3-202ENST00000422785 LTV1Q96GA3 475 aaPredicted RBP17.33■□□□□ 0.36
CDCA3-202ENST00000422785 LNPKQ9C0E8 428 aa17.33■□□□□ 0.36
CDCA3-202ENST00000422785 TBC1D32Q96NH3 1257 aa17.32■□□□□ 0.36
CDCA3-202ENST00000422785 MAP3K5Q99683 1374 aa17.32■□□□□ 0.36
CDCA3-202ENST00000422785 SLC4A2P04920 1241 aa17.31■□□□□ 0.36
CDCA3-202ENST00000422785 PHRF1Q9P1Y6 1649 aaKnown RBP17.31■□□□□ 0.36
CDCA3-202ENST00000422785 RTL5Q5HYW3 569 aaPredicted RBP17.31■□□□□ 0.36
CDCA3-202ENST00000422785 ANKRD45Q5TZF3 282 aa17.3■□□□□ 0.36
CDCA3-202ENST00000422785 BABAM1Q9NWV8 329 aa17.3■□□□□ 0.36
CDCA3-202ENST00000422785 MSH6P52701 1360 aa17.3■□□□□ 0.36
CDCA3-202ENST00000422785 ORAI2Q96SN7 254 aa17.29■□□□□ 0.36
CDCA3-202ENST00000422785 IL17REQ8NFR9 667 aa17.29■□□□□ 0.36
CDCA3-202ENST00000422785 USP35Q9P2H5 1018 aa17.29■□□□□ 0.36
CDCA3-202ENST00000422785 SOS1Q07889 1333 aaPredicted RBP17.28■□□□□ 0.36
CDCA3-202ENST00000422785 USHBP1Q8N6Y0 703 aa17.28■□□□□ 0.36
CDCA3-202ENST00000422785 BECN1Q14457 450 aa17.27■□□□□ 0.36
CDCA3-202ENST00000422785 TAF7Q15545 349 aaPredicted RBP17.27■□□□□ 0.36
CDCA3-202ENST00000422785 PROSER2Q86WR7 435 aaPredicted RBP17.27■□□□□ 0.36
CDCA3-202ENST00000422785 BMP2KLQ5H9B9 411 aa17.27■□□□□ 0.35
CDCA3-202ENST00000422785 NBPF6Q5VWK0 638 aa17.27■□□□□ 0.35
CDCA3-202ENST00000422785 RPAP2Q8IXW5 612 aaPredicted RBP17.27■□□□□ 0.35
CDCA3-202ENST00000422785 ANKRD44Q8N8A2 993 aa17.27■□□□□ 0.35
CDCA3-202ENST00000422785 NBPF4Q96M43 638 aa17.27■□□□□ 0.35
CDCA3-202ENST00000422785 SLIT3O75094 1523 aa17.26■□□□□ 0.35
CDCA3-202ENST00000422785 DCTPP1Q9H773 170 aa17.26■□□□□ 0.35
CDCA3-202ENST00000422785 ATP10DQ9P241 1426 aa17.26■□□□□ 0.35
CDCA3-202ENST00000422785 STK31Q9BXU1 1019 aa17.26■□□□□ 0.35
CDCA3-202ENST00000422785 G2E3Q7L622 706 aa17.25■□□□□ 0.35
CDCA3-202ENST00000422785 GCP02774 474 aa17.25■□□□□ 0.35
CDCA3-202ENST00000422785 CCDC30Q5VVM6 783 aa17.25■□□□□ 0.35
CDCA3-202ENST00000422785 CCT4P50991 539 aaKnown RBP17.24■□□□□ 0.35
CDCA3-202ENST00000422785 ARHGEF25Q86VW2 580 aa17.24■□□□□ 0.35
CDCA3-202ENST00000422785 C19orf44Q9H6X5 657 aa17.24■□□□□ 0.35
CDCA3-202ENST00000422785 KIF1AQ12756 1690 aa17.24■□□□□ 0.35
CDCA3-202ENST00000422785 TRPM3Q9HCF6 1732 aaPredicted RBP17.24■□□□□ 0.35
CDCA3-202ENST00000422785 CEMIPQ8WUJ3 1361 aa17.24■□□□□ 0.35
CDCA3-202ENST00000422785 CEP85Q6P2H3 762 aa17.23■□□□□ 0.35
CDCA3-202ENST00000422785 C22orf23Q9BZE7 217 aa17.23■□□□□ 0.35
CDCA3-202ENST00000422785 FAM208AQ9UK61 1670 aaKnown RBP17.23■□□□□ 0.35
CDCA3-202ENST00000422785 MFAP1P55081 439 aaKnown RBP17.23■□□□□ 0.35
CDCA3-202ENST00000422785 XPCQ01831 940 aaPredicted RBP17.23■□□□□ 0.35
CDCA3-202ENST00000422785 MEIS3Q99687 375 aa17.23■□□□□ 0.35
CDCA3-202ENST00000422785 C1orf167Q5SNV9 1468 aa17.23■□□□□ 0.35
CDCA3-202ENST00000422785 CACNA1FO60840 1977 aa17.22■□□□□ 0.35
CDCA3-202ENST00000422785 ZBTB7CA1YPR0 619 aa17.22■□□□□ 0.35
CDCA3-202ENST00000422785 KRT28Q7Z3Y7 464 aa17.22■□□□□ 0.35
CDCA3-202ENST00000422785 NCAPD2Q15021 1401 aa17.21■□□□□ 0.35
CDCA3-202ENST00000422785 RGPD2P0DJD1 1756 aa17.21■□□□□ 0.35
CDCA3-202ENST00000422785 MED1Q15648 1581 aaPredicted RBP17.21■□□□□ 0.35
CDCA3-202ENST00000422785 MST1RQ04912 1400 aa17.21■□□□□ 0.35
CDCA3-202ENST00000422785 F6X3S4 739 aa17.21■□□□□ 0.35
CDCA3-202ENST00000422785 FLIIQ13045 1269 aa17.21■□□□□ 0.35
CDCA3-202ENST00000422785 SLC4A10Q6U841 1118 aa17.2■□□□□ 0.34
CDCA3-202ENST00000422785 LRRC59Q96AG4 307 aaKnown RBP17.2■□□□□ 0.34
CDCA3-202ENST00000422785 LMO7Q8WWI1 1683 aa17.19■□□□□ 0.34
CDCA3-202ENST00000422785 PLEKHO1Q53GL0 409 aaPredicted RBP17.19■□□□□ 0.34
CDCA3-202ENST00000422785 LMOD2Q6P5Q4 547 aa17.19■□□□□ 0.34
CDCA3-202ENST00000422785 DEKP35659 375 aaKnown RBP17.18■□□□□ 0.34
CDCA3-202ENST00000422785 AMOTQ4VCS5 1084 aa17.18■□□□□ 0.34
CDCA3-202ENST00000422785 AKAP4Q5JQC9 854 aa17.18■□□□□ 0.34
CDCA3-202ENST00000422785 FKBP5Q13451 457 aaPredicted RBP17.18■□□□□ 0.34
CDCA3-202ENST00000422785 NFKBIBQ15653 356 aa17.18■□□□□ 0.34
CDCA3-202ENST00000422785 DNAJC5Q9H3Z4 198 aa17.18■□□□□ 0.34
CDCA3-202ENST00000422785 PLEKHM2Q8IWE5 1019 aa17.17■□□□□ 0.34
CDCA3-202ENST00000422785 TBC1D2Q9BYX2 928 aa17.17■□□□□ 0.34
CDCA3-202ENST00000422785 LGR6Q9HBX8 967 aa17.17■□□□□ 0.34
CDCA3-202ENST00000422785 HMMRO75330 724 aa17.17■□□□□ 0.34
CDCA3-202ENST00000422785 ANKRD24Q8TF21 1146 aa17.17■□□□□ 0.34
CDCA3-202ENST00000422785 ZNF530Q6P9A1 599 aaPredicted RBP17.17■□□□□ 0.34
CDCA3-202ENST00000422785 CAMTA1Q9Y6Y1 1673 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 145.8 ms