RNA–Protein interactions for RNA: ENST00000421914.5

NCSTN-203, Transcript of nicastrin, humanhuman

TSL 4

Gene NCSTN, Length 776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-203ENST00000421914 COL13A1Q5TAT6 717 aaPredicted RBP19.5■□□□□ 0.71
NCSTN-203ENST00000421914 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.5■□□□□ 0.71
NCSTN-203ENST00000421914 KTN1Q86UP2 1357 aaKnown RBP19.49■□□□□ 0.71
NCSTN-203ENST00000421914 ANKRD36BQ8N2N9 1353 aa19.48■□□□□ 0.71
NCSTN-203ENST00000421914 IGSF1Q8N6C5 1336 aa19.48■□□□□ 0.71
NCSTN-203ENST00000421914 LTV1Q96GA3 475 aaPredicted RBP19.47■□□□□ 0.71
NCSTN-203ENST00000421914 LY75O60449 1722 aa19.46■□□□□ 0.71
NCSTN-203ENST00000421914 DOT1LQ8TEK3 1739 aa19.45■□□□□ 0.7
NCSTN-203ENST00000421914 LTN1O94822 1766 aa19.45■□□□□ 0.7
NCSTN-203ENST00000421914 TOMM70O94826 608 aa19.45■□□□□ 0.7
NCSTN-203ENST00000421914 TNS4Q8IZW8 715 aa19.45■□□□□ 0.7
NCSTN-203ENST00000421914 NSD2O96028 1365 aa19.44■□□□□ 0.7
NCSTN-203ENST00000421914 USP47Q96K76 1375 aa19.44■□□□□ 0.7
NCSTN-203ENST00000421914 NME9Q86XW9 330 aa19.44■□□□□ 0.7
NCSTN-203ENST00000421914 HTRA3P83110 453 aa19.42■□□□□ 0.7
NCSTN-203ENST00000421914 PRELPP51888 382 aa19.4■□□□□ 0.7
NCSTN-203ENST00000421914 PPP4R3CPQ6ZMV5 832 aa19.4■□□□□ 0.7
NCSTN-203ENST00000421914 FLAD1Q8NFF5 587 aa19.4■□□□□ 0.7
NCSTN-203ENST00000421914 USP31Q70CQ4 1352 aa19.4■□□□□ 0.7
NCSTN-203ENST00000421914 ZCRB1Q8TBF4 217 aaKnown RBP19.39■□□□□ 0.69
NCSTN-203ENST00000421914 KLRG1Q96E93 195 aa19.39■□□□□ 0.69
NCSTN-203ENST00000421914 NMRK2Q9NPI5 230 aa19.38■□□□□ 0.69
NCSTN-203ENST00000421914 WDR90Q96KV7 1748 aa19.37■□□□□ 0.69
NCSTN-203ENST00000421914 PHF14O94880 888 aa19.37■□□□□ 0.69
NCSTN-203ENST00000421914 C5P01031 1676 aa19.36■□□□□ 0.69
NCSTN-203ENST00000421914 AK7Q96M32 723 aa19.36■□□□□ 0.69
NCSTN-203ENST00000421914 MON2Q7Z3U7 1717 aa19.35■□□□□ 0.69
NCSTN-203ENST00000421914 SMIM5Q71RC9 77 aa19.35■□□□□ 0.69
NCSTN-203ENST00000421914 C16orf71Q8IYS4 520 aaPredicted RBP19.35■□□□□ 0.69
NCSTN-203ENST00000421914 IP6K1Q92551 441 aa19.35■□□□□ 0.69
NCSTN-203ENST00000421914 JMYQ8N9B5 988 aa19.34■□□□□ 0.69
NCSTN-203ENST00000421914 TMC1Q8TDI8 760 aa19.33■□□□□ 0.68
NCSTN-203ENST00000421914 SBNO2Q9Y2G9 1366 aa19.32■□□□□ 0.68
NCSTN-203ENST00000421914 HMGB2P26583 209 aaKnown RBP19.32■□□□□ 0.68
NCSTN-203ENST00000421914 AMIGO3Q86WK7 504 aa19.32■□□□□ 0.68
NCSTN-203ENST00000421914 RBM46Q8TBY0 533 aaKnown RBP19.32■□□□□ 0.68
NCSTN-203ENST00000421914 PALLDQ8WX93 1383 aa19.32■□□□□ 0.68
NCSTN-203ENST00000421914 MEGF6O75095 1541 aa19.31■□□□□ 0.68
NCSTN-203ENST00000421914 USP54Q70EL1 1684 aa19.31■□□□□ 0.68
NCSTN-203ENST00000421914 FAM208AQ9UK61 1670 aaKnown RBP19.31■□□□□ 0.68
NCSTN-203ENST00000421914 MPRIPQ6WCQ1 1025 aa19.31■□□□□ 0.68
NCSTN-203ENST00000421914 ARHGAP27Q6ZUM4 889 aa19.31■□□□□ 0.68
NCSTN-203ENST00000421914 BCS1LQ9Y276 419 aa19.31■□□□□ 0.68
NCSTN-203ENST00000421914 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.3■□□□□ 0.68
NCSTN-203ENST00000421914 HDGFL2Q7Z4V5 671 aaPredicted RBP19.3■□□□□ 0.68
NCSTN-203ENST00000421914 CICQ96RK0 1608 aaPredicted RBP19.29■□□□□ 0.68
NCSTN-203ENST00000421914 PCNTO95613 3336 aa19.29■□□□□ 0.68
NCSTN-203ENST00000421914 TAF1LQ8IZX4 1826 aa19.28■□□□□ 0.68
NCSTN-203ENST00000421914 AMPHP49418 695 aa19.28■□□□□ 0.68
NCSTN-203ENST00000421914 C4BP0C0L5 1744 aa19.28■□□□□ 0.68
NCSTN-203ENST00000421914 RGPD2P0DJD1 1756 aa19.27■□□□□ 0.67
NCSTN-203ENST00000421914 FSTL1Q12841 308 aa19.26■□□□□ 0.67
NCSTN-203ENST00000421914 USHBP1Q8N6Y0 703 aa19.26■□□□□ 0.67
NCSTN-203ENST00000421914 CD163L1Q9NR16 1453 aa19.26■□□□□ 0.67
NCSTN-203ENST00000421914 ROCK2O75116 1388 aaKnown RBP19.25■□□□□ 0.67
NCSTN-203ENST00000421914 A0A0G2JLW4 131 aa19.25■□□□□ 0.67
NCSTN-203ENST00000421914 HOXC9P31274 260 aa19.25■□□□□ 0.67
NCSTN-203ENST00000421914 RAPGEF4Q8WZA2 1011 aa19.25■□□□□ 0.67
NCSTN-203ENST00000421914 TOGARAM1Q9Y4F4 1720 aa19.25■□□□□ 0.67
NCSTN-203ENST00000421914 NSD3Q9BZ95 1437 aa19.25■□□□□ 0.67
NCSTN-203ENST00000421914 PXDNLA1KZ92 1463 aa19.24■□□□□ 0.67
NCSTN-203ENST00000421914 MMP10P09238 476 aa19.24■□□□□ 0.67
NCSTN-203ENST00000421914 FBLN1P23142 703 aa19.24■□□□□ 0.67
NCSTN-203ENST00000421914 SLC12A5Q9H2X9 1139 aa19.24■□□□□ 0.67
NCSTN-203ENST00000421914 EDC4Q6P2E9 1401 aaKnown RBP19.24■□□□□ 0.67
NCSTN-203ENST00000421914 MAP3K19Q56UN5 1328 aa19.24■□□□□ 0.67
NCSTN-203ENST00000421914 UBR3Q6ZT12 1888 aa19.23■□□□□ 0.67
NCSTN-203ENST00000421914 FCHSD2O94868 740 aa19.23■□□□□ 0.67
NCSTN-203ENST00000421914 SSFA2P28290 1259 aa19.23■□□□□ 0.67
NCSTN-203ENST00000421914 C9orf131Q5VYM1 1079 aa19.23■□□□□ 0.67
NCSTN-203ENST00000421914 SMARCC1Q92922 1105 aaPredicted RBP19.23■□□□□ 0.67
NCSTN-203ENST00000421914 NBPF6Q5VWK0 638 aa19.22■□□□□ 0.67
NCSTN-203ENST00000421914 NBPF4Q96M43 638 aa19.22■□□□□ 0.67
NCSTN-203ENST00000421914 N4BP2Q86UW6 1770 aaPredicted RBP19.21■□□□□ 0.67
NCSTN-203ENST00000421914 HSPA1AP0DMV8 641 aaKnown RBP19.21■□□□□ 0.67
NCSTN-203ENST00000421914 HSPA1BP0DMV9 641 aaKnown RBP19.21■□□□□ 0.67
NCSTN-203ENST00000421914 TATP17735 454 aaPredicted RBP19.21■□□□□ 0.67
NCSTN-203ENST00000421914 L3MBTL2Q969R5 705 aa19.21■□□□□ 0.67
NCSTN-203ENST00000421914 TERF2IPQ9NYB0 399 aa19.21■□□□□ 0.67
NCSTN-203ENST00000421914 CGNL1Q0VF96 1302 aa19.21■□□□□ 0.67
NCSTN-203ENST00000421914 GNPATO15228 680 aa19.2■□□□□ 0.66
NCSTN-203ENST00000421914 TGFB2P61812 414 aa19.2■□□□□ 0.66
NCSTN-203ENST00000421914 LINC00116Q8NCU8 138 aa19.2■□□□□ 0.66
NCSTN-203ENST00000421914 COG3Q96JB2 828 aa19.2■□□□□ 0.66
NCSTN-203ENST00000421914 RRAGCQ9HB90 399 aa19.2■□□□□ 0.66
NCSTN-203ENST00000421914 KDM2BQ8NHM5 1336 aa19.2■□□□□ 0.66
NCSTN-203ENST00000421914 PCDH11XQ9BZA7 1347 aa19.2■□□□□ 0.66
NCSTN-203ENST00000421914 PCDH11YQ9BZA8 1340 aa19.2■□□□□ 0.66
NCSTN-203ENST00000421914 DPEP1P16444 411 aa19.19■□□□□ 0.66
NCSTN-203ENST00000421914 KCPQ6ZWJ8 1503 aa19.19■□□□□ 0.66
NCSTN-203ENST00000421914 A0A1W2PP64 1363 aa19.19■□□□□ 0.66
NCSTN-203ENST00000421914 PLEKHG2Q9H7P9 1386 aa19.18■□□□□ 0.66
NCSTN-203ENST00000421914 SMC1BQ8NDV3 1235 aa19.17■□□□□ 0.66
NCSTN-203ENST00000421914 LOC102724428A0A0B4J2F2 783 aa19.16■□□□□ 0.66
NCSTN-203ENST00000421914 SIK1P57059 783 aa19.16■□□□□ 0.66
NCSTN-203ENST00000421914 KIAA1551Q9HCM1 1747 aa19.15■□□□□ 0.66
NCSTN-203ENST00000421914 RRS1Q15050 365 aaKnown RBP19.15■□□□□ 0.66
NCSTN-203ENST00000421914 PIGBQ92521 554 aa19.15■□□□□ 0.66
NCSTN-203ENST00000421914 RNF181Q9P0P0 153 aa19.15■□□□□ 0.66
NCSTN-203ENST00000421914 SMG6Q86US8 1419 aaKnown RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms